FFCP PHASE1:Hg19::chr11:64897765..64897781,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84447|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20738|TSSclassifier=S|UniProt=|association_with_transcript=-4bp_to_ENST00000527765_5end|description=CAGE_peak_19_at_SYVN1_5end|id=chr11:64897765..64897781,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000775;3.48e-23;3!CL:0000047;1.38e-09;2!CL:0000094;2.60e-09;8!CL:0000081;5.23e-07;11!CL:0002567;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000775,2.63e-23,3;CL:0000094,2.35e-09,8;CL:0000081,4.85e-07,11;CL:0002567,6.88e-07,3|ontology_enrichment_development_v019=UBERON:0005425;8.01e-18;1!UBERON:0003056;8.38e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2|ontology_enrichment_uberon=UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0000161!6.00e-08!35;UBERON:0001007!5.33e-07!155;UBERON:0001555!5.33e-07!155;UBERON:0007026!5.33e-07!155|ontology_enrichment_uberon_v019=UBERON:0000029;8.01e-18;1!UBERON:0000941;8.01e-18;1!UBERON:0002171;8.01e-18;1!UBERON:0001785;8.01e-18;1!UBERON:0002464;8.01e-18;1!UBERON:0004904;8.01e-18;1!UBERON:0001021;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0003714;1.38e-09;2!UBERON:0005162;1.38e-09;2!UBERON:0000122;1.38e-09;2!UBERON:0002106;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.23e-18,1;UBERON:0006518,6.23e-18,1;UBERON:0008949,6.23e-18,1;UBERON:0000101,6.23e-18,1;UBERON:0002167,6.23e-18,1;UBERON:0000029,8.72e-18,1;UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0.122834317311768,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309157587715317,0.257640540045629,0.18611685633159,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,1.90994212779139,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0.128343036279748,1.27047312111232,0,0,0,0,0,2.99161459204025,1.65766205374414,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0,0,0.391602314925481,0.686286847621712,0,0.215714200818617,0,0.909382714338778,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.321707842287215,0,0,0.710246901252508,0.328508624055237,0,0.116210378459959,0.846016147141356,0.200506470303285,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,1.54227252690289,0.270946437543853,0,0.509752546090077,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0.309123034943167,0,0.082509499920588,0,0.650060246036521,0,0.48335359146061,0,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.165284915360978,0.192190067365106,0,0.4046311234222,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.329294892959902,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0.25193274785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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84447 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20738 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-4bp_to_ENST00000527765_5end | |||
|description=CAGE_peak_19_at_SYVN1_5end | |||
|id=chr11:64897765..64897781,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;3.48e-23;3!CL:0000047;1.38e-09;2!CL:0000094;2.60e-09;8!CL:0000081;5.23e-07;11!CL:0002567;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.63e-23,3;CL:0000094,2.35e-09,8;CL:0000081,4.85e-07,11;CL:0002567,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005425;8.01e-18;1!UBERON:0003056;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.52e-08!169;UBERON:0000925!1.52e-08!169;UBERON:0006595!1.52e-08!169;UBERON:0000161!6.00e-08!35;UBERON:0001007!5.33e-07!155;UBERON:0001555!5.33e-07!155;UBERON:0007026!5.33e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;8.01e-18;1!UBERON:0000941;8.01e-18;1!UBERON:0002171;8.01e-18;1!UBERON:0001785;8.01e-18;1!UBERON:0002464;8.01e-18;1!UBERON:0004904;8.01e-18;1!UBERON:0001021;8.01e-18;1!UBERON:0006518;8.01e-18;1!UBERON:0008949;8.01e-18;1!UBERON:0000101;8.01e-18;1!UBERON:0002167;8.01e-18;1!UBERON:0003714;1.38e-09;2!UBERON:0005162;1.38e-09;2!UBERON:0000122;1.38e-09;2!UBERON:0002106;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.23e-18,1;UBERON:0006518,6.23e-18,1;UBERON:0008949,6.23e-18,1;UBERON:0000101,6.23e-18,1;UBERON:0002167,6.23e-18,1;UBERON:0000029,8.72e-18,1;UBERON:0000941,1.03e-17,1;UBERON:0001785,1.03e-17,1;UBERON:0002464,1.03e-17,1;UBERON:0004904,1.03e-17,1;UBERON:0001021,1.03e-17,1;UBERON:0003902,1.03e-17,1;UBERON:0005425,1.03e-17,1;UBERON:0003714,1.57e-09,2;UBERON:0005162,1.57e-09,2;UBERON:0000122,1.57e-09,2 | |||
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| |||
|short_description=p19@SYVN1 | |||
}} |
Revision as of 18:52, 10 September 2013
Short description: | p19@SYVN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_SYVN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000527765_5end |
EntrezGene: | SYVN1 |
HGNC: | 20738 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.63e-23 | 3 |
granulocyte | 2.35e-09 | 8 |
blood cell | 4.85e-07 | 11 |
light melanocyte | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.23e-18 | 1 |
right lung lobe | 6.23e-18 | 1 |
lower lobe of lung | 6.23e-18 | 1 |
lobe of lung | 6.23e-18 | 1 |
right lung | 6.23e-18 | 1 |
lymph node | 8.72e-18 | 1 |
cranial nerve II | 1.03e-17 | 1 |
cranial nerve | 1.03e-17 | 1 |
nerve trunk | 1.03e-17 | 1 |
nerve connecting eye with brain | 1.03e-17 | 1 |
nerve | 1.03e-17 | 1 |
retinal neural layer | 1.03e-17 | 1 |
presumptive neural retina | 1.03e-17 | 1 |
neural tissue | 1.57e-09 | 2 |
multi cell component structure | 1.57e-09 | 2 |
neuron projection bundle | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.46e-10 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.