FFCP PHASE1:Hg19::chr11:62389577..62389618,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=923 | |||
|TSSclassifier=S | |||
|UniProt=E9PNA1 | |||
|association_with_transcript=0bp_to_ENST00000534715_5end | |||
|description=CAGE_peak_2_at_B3GAT3_5end | |||
|id=chr11:62389577..62389618,- | |||
|ontology_enrichment_celltype=CL:0000838!2.85e-13!52;CL:0000542!5.05e-13!53;CL:0000051!5.05e-13!53;CL:0000791!6.39e-12!18;CL:0000789!6.39e-12!18;CL:0002420!6.39e-12!18;CL:0002419!6.39e-12!18;CL:0000790!6.39e-12!18;CL:0000084!3.36e-10!25;CL:0000827!3.36e-10!25;CL:0000625!6.14e-08!11;CL:0000037!7.64e-08!172;CL:0000566!7.64e-08!172;CL:0000236!2.55e-07!14;CL:0000988!2.99e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.83e-12;18!CL:0000789;2.83e-12;18!CL:0002419;2.83e-12;18!CL:0000084;1.41e-10;25!CL:0000542;7.25e-09;53!CL:0000625;3.59e-08;11!CL:0000236;3.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.43e-13,52;CL:0000542,4.32e-13,53;CL:0000051,4.32e-13,53;CL:0000791,5.86e-12,18;CL:0000789,5.86e-12,18;CL:0002420,5.86e-12,18;CL:0002419,5.86e-12,18;CL:0000790,5.86e-12,18;CL:0000084,3.13e-10,25;CL:0000827,3.13e-10,25;CL:0000037,1.52e-08,168;CL:0000625,5.82e-08,11;CL:0000988,6.06e-08,177;CL:0000236,2.43e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.83e-12;18!CL:0000051;7.25e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.55e-14!115;UBERON:0001049!3.91e-12!57;UBERON:0005068!3.91e-12!57;UBERON:0006241!3.91e-12!57;UBERON:0007135!3.91e-12!57;UBERON:0002780!7.14e-11!41;UBERON:0001890!7.14e-11!41;UBERON:0006240!7.14e-11!41;UBERON:0003080!7.95e-11!42;UBERON:0000073!1.64e-10!94;UBERON:0001016!1.64e-10!94;UBERON:0002616!3.27e-10!59;UBERON:0002619!9.67e-10!22;UBERON:0001869!1.27e-09!32;UBERON:0002020!1.49e-09!34;UBERON:0003528!1.49e-09!34;UBERON:0001893!1.56e-09!34;UBERON:0001017!3.23e-09!82;UBERON:0001950!3.70e-09!20;UBERON:0005743!3.77e-09!86;UBERON:0002791!4.09e-09!33;UBERON:0002346!8.99e-09!90;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0000956!1.54e-07!25;UBERON:0000203!1.54e-07!25;UBERON:0003075!1.59e-07!86;UBERON:0007284!1.59e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.29e-10;22!UBERON:0001950;2.49e-09;20!UBERON:0001869;5.44e-09;32!UBERON:0003528;1.28e-08;34!UBERON:0002020;1.28e-08;34!UBERON:0001893;1.33e-08;34!UBERON:0002791;1.54e-08;32!UBERON:0002780;2.38e-08;41!UBERON:0001890;2.38e-08;41!UBERON:0000956;6.77e-08;25!UBERON:0000203;6.77e-08;25!UBERON:0000073;2.89e-07;53!UBERON:0002616;2.89e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.94e-14,114;UBERON:0000073,2.95e-12,53;UBERON:0002616,2.95e-12,53;UBERON:0001049,3.40e-12,56;UBERON:0005068,3.40e-12,56;UBERON:0006241,3.40e-12,56;UBERON:0007135,3.40e-12,56;UBERON:0002780,6.61e-11,41;UBERON:0001890,6.61e-11,41;UBERON:0003080,6.61e-11,41;UBERON:0006240,6.61e-11,41;UBERON:0001016,9.75e-11,89;UBERON:0002619,9.03e-10,22;UBERON:0001869,1.19e-09,32;UBERON:0003528,1.39e-09,34;UBERON:0002020,1.39e-09,34;UBERON:0001893,1.46e-09,34;UBERON:0001017,2.33e-09,81;UBERON:0001950,3.47e-09,20;UBERON:0002791,4.06e-09,32;UBERON:0002346,5.51e-09,86;UBERON:0000955,1.10e-08,68;UBERON:0006238,1.10e-08,68;UBERON:0003075,1.05e-07,82;UBERON:0007284,1.05e-07,82;UBERON:0000956,1.47e-07,25;UBERON:0000203,1.47e-07,25;UBERON:0003056,3.80e-07,61 | |||
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| |||
|short_description=p2@B3GAT3 | |||
}} |
Revision as of 18:33, 10 September 2013
Short description: | p2@B3GAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B3GAT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000534715_5end |
EntrezGene: | B3GAT3 |
HGNC: | 923 |
UniProt: | E9PNA1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.43e-13 | 52 |
lymphocyte | 4.32e-13 | 53 |
common lymphoid progenitor | 4.32e-13 | 53 |
mature alpha-beta T cell | 5.86e-12 | 18 |
alpha-beta T cell | 5.86e-12 | 18 |
immature T cell | 5.86e-12 | 18 |
mature T cell | 5.86e-12 | 18 |
immature alpha-beta T cell | 5.86e-12 | 18 |
T cell | 3.13e-10 | 25 |
pro-T cell | 3.13e-10 | 25 |
hematopoietic stem cell | 1.52e-08 | 168 |
CD8-positive, alpha-beta T cell | 5.82e-08 | 11 |
hematopoietic cell | 6.06e-08 | 177 |
B cell | 2.43e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.94e-14 | 114 |
regional part of nervous system | 2.95e-12 | 53 |
regional part of brain | 2.95e-12 | 53 |
neural tube | 3.40e-12 | 56 |
neural rod | 3.40e-12 | 56 |
future spinal cord | 3.40e-12 | 56 |
neural keel | 3.40e-12 | 56 |
regional part of forebrain | 6.61e-11 | 41 |
forebrain | 6.61e-11 | 41 |
anterior neural tube | 6.61e-11 | 41 |
future forebrain | 6.61e-11 | 41 |
nervous system | 9.75e-11 | 89 |
regional part of cerebral cortex | 9.03e-10 | 22 |
cerebral hemisphere | 1.19e-09 | 32 |
brain grey matter | 1.39e-09 | 34 |
gray matter | 1.39e-09 | 34 |
telencephalon | 1.46e-09 | 34 |
central nervous system | 2.33e-09 | 81 |
neocortex | 3.47e-09 | 20 |
regional part of telencephalon | 4.06e-09 | 32 |
neurectoderm | 5.51e-09 | 86 |
brain | 1.10e-08 | 68 |
future brain | 1.10e-08 | 68 |
neural plate | 1.05e-07 | 82 |
presumptive neural plate | 1.05e-07 | 82 |
cerebral cortex | 1.47e-07 | 25 |
pallium | 1.47e-07 | 25 |
pre-chordal neural plate | 3.80e-07 | 61 |
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