FFCP PHASE1:Hg19::chr11:61124776..61124813,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=220002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23014|TSSclassifier=S|UniProt=F5H5L0|association_with_transcript=5bp_to_ENST00000542361_5end|description=CAGE_peak_6_at_CYBASC3_5end|id=chr11:61124776..61124813,-|ontology_enrichment_celltype=CL:0000738!3.51e-71!140;CL:0002087!1.18e-63!119;CL:0002031!7.73e-60!124;CL:0002009!7.30e-55!65;CL:0002194!9.76e-55!63;CL:0000576!9.76e-55!63;CL:0000040!9.76e-55!63;CL:0000559!9.76e-55!63;CL:0000557!1.34e-54!71;CL:0000766!5.19e-54!76;CL:0000037!1.17e-53!172;CL:0000566!1.17e-53!172;CL:0000839!2.43e-53!70;CL:0000988!2.36e-50!182;CL:0002057!6.16e-50!42;CL:0002032!2.86e-49!165;CL:0000837!2.86e-49!165;CL:0000860!1.36e-45!45;CL:0000763!3.97e-37!112;CL:0000049!3.97e-37!112;CL:0000945!9.77e-22!24;CL:0000826!9.77e-22!24;CL:0000236!8.69e-16!14;CL:0000134!9.35e-13!358;CL:0002320!5.11e-12!365;CL:0000451!1.44e-11!10;CL:0000542!9.30e-11!53;CL:0000051!9.30e-11!53;CL:0000838!4.37e-10!52;CL:0000219!1.78e-09!390;CL:0000990!8.31e-09!8;CL:0000048!1.85e-08!430;CL:0000723!5.26e-08!436;CL:0000034!8.45e-08!444|ontology_enrichment_celltype_v019=CL:0000473;4.72e-61;39!CL:0000234;4.72e-61;39!CL:0000860;4.24e-58;33!CL:0002057;4.24e-58;33!CL:0000576;7.47e-39;48!CL:0000766;9.53e-29;69!CL:0000945;8.26e-27;24!CL:0000236;1.07e-22;13!CL:0002087;1.48e-21;104!CL:0000738;2.61e-18;136!CL:0000235;6.83e-17;6!CL:0000763;2.28e-14;100!CL:0000784;9.78e-10;3!CL:0000988;2.28e-09;177!CL:0000219;7.84e-09;193!CL:0000451;1.84e-08;10!CL:0000767;3.59e-08;3!CL:0000542;3.30e-07;53!CL:0002393;8.18e-07;6!CL:0002397;8.18e-07;6|ontology_enrichment_celltype_v019_2=CL:0000738,1.70e-79,136;CL:0000473,2.04e-78,48;CL:0000234,2.04e-78,48;CL:0002087,3.23e-73,115;CL:0002009,5.22e-72,61;CL:0002194,3.34e-71,59;CL:0000576,3.34e-71,59;CL:0000040,3.34e-71,59;CL:0000559,3.34e-71,59;CL:0002031,2.93e-67,120;CL:0000766,2.57e-65,72;CL:0000557,1.43e-64,67;CL:0000860,3.68e-63,42;CL:0002057,3.68e-63,42;CL:0000839,1.68e-62,66;CL:0000037,2.12e-61,168;CL:0000988,1.76e-57,177;CL:0002032,4.64e-56,161;CL:0000837,4.64e-56,161;CL:0000763,8.37e-46,108;CL:0000049,8.37e-46,108;CL:0000945,6.72e-27,24;CL:0000826,6.72e-27,24;CL:0000236,7.68e-21,14;CL:0000134,9.32e-21,354;CL:0002320,4.83e-20,361;CL:0000219,1.58e-17,386;CL:0000235,6.06e-17,6;CL:0000048,1.87e-14,427;CL:0000723,4.96e-14,433;CL:0000034,1.75e-13,441;CL:0000838,4.30e-10,52;CL:0000542,7.95e-10,53;CL:0000051,7.95e-10,53;CL:0000784,9.80e-10,3;CL:0000451,1.94e-08,10;CL:0000767,3.69e-08,3|ontology_enrichment_development_v019=CL:0002057;1.27e-46;42!CL:0000049;2.60e-13;108!CL:0000051;3.30e-07;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.88e-54!102;UBERON:0003061!3.88e-54!102;UBERON:0002193!9.83e-54!112;UBERON:0002371!3.07e-46!80;UBERON:0001474!1.20e-41!86;UBERON:0002405!6.66e-39!115;UBERON:0004765!1.36e-32!101;UBERON:0001434!1.36e-32!101;UBERON:0003081!1.59e-16!216;UBERON:0002204!2.65e-13!167;UBERON:0002384!6.12e-12!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.37e-55,76;UBERON:0002390,8.85e-54,98;UBERON:0003061,8.85e-54,98;UBERON:0001474,1.09e-50,82;UBERON:0002405,3.18e-50,93;UBERON:0002193,7.92e-50,108;UBERON:0004765,3.66e-45,90;UBERON:0001434,1.71e-39,100;UBERON:0003081,2.11e-20,203;UBERON:0002384,4.55e-19,371;UBERON:0002204,4.80e-19,167;UBERON:0000926,8.63e-09,315;UBERON:0004120,8.63e-09,315;UBERON:0006603,8.63e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06978768047132,1.31360943119913,1.57421562627358,2.75354993794233,1.15148819429164,2.63187409637329,0,0,0,0.0774672005803016,0.426507697462265,0,1.10799081706375,2.4065333696417,2.17010870715852,0.895661896959697,5.18229865630367,1.80302897343931,3.19876125315042,5.66813915533214,2.66842467306598,16.5024616203036,9.45686142450199,14.5561994320699,5.46615545412086,4.61089271752381,5.43909128743746,12.7555901872549,16.1371170895957,10.8341189275473,8.094420600332,6.82265375144614,7.41587498668779,17.4467818651414,17.3301674621091,12.7867425159808,1.31940520074686,0.997318288108159,1.27867425159808,40.9195026466303,27.2344907851747,24.2900677108274,1.7587406567972,2.08593167368081,2.38907729175628,32.0861736395685,36.4594859627689,25.3169909952708,0.211255286311942,0.850417199860174,1.25795187305026,0.898629049171961,0.901061357049038,0.964353520182481,0,0,0.182664153764634,3.51992488922645,3.82297027883492,7.11607403090844,5.12076267079809,7.60752375368424,3.4485146397269,7.93253847341835,7.63243003628291,2.84606484554724,1.17447437874188,1.14681968437569,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.132957960518865,34.1041592756639,22.8797964312051,21.9159925784443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=220002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |||
|TSSclassifier=S | |||
|UniProt=F5H5L0 | |||
|association_with_transcript=5bp_to_ENST00000542361_5end | |||
|description=CAGE_peak_6_at_CYBASC3_5end | |||
|id=chr11:61124776..61124813,- | |||
|ontology_enrichment_celltype=CL:0000738!3.51e-71!140;CL:0002087!1.18e-63!119;CL:0002031!7.73e-60!124;CL:0002009!7.30e-55!65;CL:0002194!9.76e-55!63;CL:0000576!9.76e-55!63;CL:0000040!9.76e-55!63;CL:0000559!9.76e-55!63;CL:0000557!1.34e-54!71;CL:0000766!5.19e-54!76;CL:0000037!1.17e-53!172;CL:0000566!1.17e-53!172;CL:0000839!2.43e-53!70;CL:0000988!2.36e-50!182;CL:0002057!6.16e-50!42;CL:0002032!2.86e-49!165;CL:0000837!2.86e-49!165;CL:0000860!1.36e-45!45;CL:0000763!3.97e-37!112;CL:0000049!3.97e-37!112;CL:0000945!9.77e-22!24;CL:0000826!9.77e-22!24;CL:0000236!8.69e-16!14;CL:0000134!9.35e-13!358;CL:0002320!5.11e-12!365;CL:0000451!1.44e-11!10;CL:0000542!9.30e-11!53;CL:0000051!9.30e-11!53;CL:0000838!4.37e-10!52;CL:0000219!1.78e-09!390;CL:0000990!8.31e-09!8;CL:0000048!1.85e-08!430;CL:0000723!5.26e-08!436;CL:0000034!8.45e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.72e-61;39!CL:0000234;4.72e-61;39!CL:0000860;4.24e-58;33!CL:0002057;4.24e-58;33!CL:0000576;7.47e-39;48!CL:0000766;9.53e-29;69!CL:0000945;8.26e-27;24!CL:0000236;1.07e-22;13!CL:0002087;1.48e-21;104!CL:0000738;2.61e-18;136!CL:0000235;6.83e-17;6!CL:0000763;2.28e-14;100!CL:0000784;9.78e-10;3!CL:0000988;2.28e-09;177!CL:0000219;7.84e-09;193!CL:0000451;1.84e-08;10!CL:0000767;3.59e-08;3!CL:0000542;3.30e-07;53!CL:0002393;8.18e-07;6!CL:0002397;8.18e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.70e-79,136;CL:0000473,2.04e-78,48;CL:0000234,2.04e-78,48;CL:0002087,3.23e-73,115;CL:0002009,5.22e-72,61;CL:0002194,3.34e-71,59;CL:0000576,3.34e-71,59;CL:0000040,3.34e-71,59;CL:0000559,3.34e-71,59;CL:0002031,2.93e-67,120;CL:0000766,2.57e-65,72;CL:0000557,1.43e-64,67;CL:0000860,3.68e-63,42;CL:0002057,3.68e-63,42;CL:0000839,1.68e-62,66;CL:0000037,2.12e-61,168;CL:0000988,1.76e-57,177;CL:0002032,4.64e-56,161;CL:0000837,4.64e-56,161;CL:0000763,8.37e-46,108;CL:0000049,8.37e-46,108;CL:0000945,6.72e-27,24;CL:0000826,6.72e-27,24;CL:0000236,7.68e-21,14;CL:0000134,9.32e-21,354;CL:0002320,4.83e-20,361;CL:0000219,1.58e-17,386;CL:0000235,6.06e-17,6;CL:0000048,1.87e-14,427;CL:0000723,4.96e-14,433;CL:0000034,1.75e-13,441;CL:0000838,4.30e-10,52;CL:0000542,7.95e-10,53;CL:0000051,7.95e-10,53;CL:0000784,9.80e-10,3;CL:0000451,1.94e-08,10;CL:0000767,3.69e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-46;42!CL:0000049;2.60e-13;108!CL:0000051;3.30e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.88e-54!102;UBERON:0003061!3.88e-54!102;UBERON:0002193!9.83e-54!112;UBERON:0002371!3.07e-46!80;UBERON:0001474!1.20e-41!86;UBERON:0002405!6.66e-39!115;UBERON:0004765!1.36e-32!101;UBERON:0001434!1.36e-32!101;UBERON:0003081!1.59e-16!216;UBERON:0002204!2.65e-13!167;UBERON:0002384!6.12e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.37e-55,76;UBERON:0002390,8.85e-54,98;UBERON:0003061,8.85e-54,98;UBERON:0001474,1.09e-50,82;UBERON:0002405,3.18e-50,93;UBERON:0002193,7.92e-50,108;UBERON:0004765,3.66e-45,90;UBERON:0001434,1.71e-39,100;UBERON:0003081,2.11e-20,203;UBERON:0002384,4.55e-19,371;UBERON:0002204,4.80e-19,167;UBERON:0000926,8.63e-09,315;UBERON:0004120,8.63e-09,315;UBERON:0006603,8.63e-09,315 | |||
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|short_description=p6@CYBASC3 | |||
}} |
Revision as of 18:23, 10 September 2013
Short description: | p6@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CYBASC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000542361_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | F5H5L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.37e-55 | 76 |
hematopoietic system | 8.85e-54 | 98 |
blood island | 8.85e-54 | 98 |
bone element | 1.09e-50 | 82 |
immune system | 3.18e-50 | 93 |
hemolymphoid system | 7.92e-50 | 108 |
skeletal element | 3.66e-45 | 90 |
skeletal system | 1.71e-39 | 100 |
lateral plate mesoderm | 2.11e-20 | 203 |
connective tissue | 4.55e-19 | 371 |
musculoskeletal system | 4.80e-19 | 167 |
mesoderm | 8.63e-09 | 315 |
mesoderm-derived structure | 8.63e-09 | 315 |
presumptive mesoderm | 8.63e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.