FFCP PHASE1:Hg19::chr11:59522837..59522862,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11438 | |||
|TSSclassifier=S | |||
|UniProt=E7ET77,E9PQJ8 | |||
|association_with_transcript=0bp_to_ENST00000437946,ENST00000533637_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_STX3_5end | |||
|id=chr11:59522837..59522862,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.67e-24!76;CL:0000557!3.26e-21!71;CL:0000839!1.81e-18!70;CL:0000763!2.32e-18!112;CL:0000049!2.32e-18!112;CL:0002009!3.20e-18!65;CL:0002194!2.46e-17!63;CL:0000576!2.46e-17!63;CL:0000040!2.46e-17!63;CL:0000559!2.46e-17!63;CL:0002057!7.68e-17!42;CL:0000860!5.82e-16!45;CL:0000066!1.90e-15!254 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-18;33!CL:0002057;2.38e-18;33!CL:0000473;4.82e-17;39!CL:0000234;4.82e-17;39!CL:0000576;3.59e-11;48!CL:0000766;5.19e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.60e-25,72;CL:0000557,1.69e-22,67;CL:0000839,1.32e-19,66;CL:0002009,1.98e-19,61;CL:0000763,4.35e-19,108;CL:0000049,4.35e-19,108;CL:0000473,7.40e-19,48;CL:0000234,7.40e-19,48;CL:0002194,1.59e-18,59;CL:0000576,1.59e-18,59;CL:0000040,1.59e-18,59;CL:0000559,1.59e-18,59;CL:0000860,7.65e-17,42;CL:0002057,7.65e-17,42;CL:0000066,9.93e-16,253 | |||
|ontology_enrichment_development_v019=CL:0002057;9.08e-13;42 | |||
|ontology_enrichment_disease=DOID:305!2.33e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.31e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.50e-16!112;UBERON:0002371!4.10e-16!80;UBERON:0002390!5.97e-16!102;UBERON:0003061!5.97e-16!102;UBERON:0001474!2.23e-13!86;UBERON:0002405!1.18e-11!115;UBERON:0004765!1.33e-09!101;UBERON:0001434!1.33e-09!101;UBERON:0003081!1.69e-08!216;UBERON:0000062!3.62e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.20e-17,76;UBERON:0002193,5.96e-17,108;UBERON:0002390,1.20e-16,98;UBERON:0003061,1.20e-16,98;UBERON:0002405,5.03e-15,93;UBERON:0001474,4.56e-14,82;UBERON:0004765,1.19e-11,90;UBERON:0001434,1.10e-08,100;UBERON:0003081,2.68e-08,203 | |||
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| |||
|short_description=p1@STX3 | |||
}} |
Revision as of 18:16, 10 September 2013
Short description: | p1@STX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_STX3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000437946, ENST00000533637_5end |
EntrezGene: | STX3 |
HGNC: | 11438 |
UniProt: | E7ET77E9PQJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.60e-25 | 72 |
granulocyte monocyte progenitor cell | 1.69e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.32e-19 | 66 |
macrophage dendritic cell progenitor | 1.98e-19 | 61 |
myeloid cell | 4.35e-19 | 108 |
common myeloid progenitor | 4.35e-19 | 108 |
defensive cell | 7.40e-19 | 48 |
phagocyte | 7.40e-19 | 48 |
monopoietic cell | 1.59e-18 | 59 |
monocyte | 1.59e-18 | 59 |
monoblast | 1.59e-18 | 59 |
promonocyte | 1.59e-18 | 59 |
classical monocyte | 7.65e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.65e-17 | 42 |
epithelial cell | 9.93e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.20e-17 | 76 |
hemolymphoid system | 5.96e-17 | 108 |
hematopoietic system | 1.20e-16 | 98 |
blood island | 1.20e-16 | 98 |
immune system | 5.03e-15 | 93 |
bone element | 4.56e-14 | 82 |
skeletal element | 1.19e-11 | 90 |
skeletal system | 1.10e-08 | 100 |
lateral plate mesoderm | 2.68e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.31e-10 | 106 |
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