FFCP PHASE1:Hg19::chr11:58980322..58980326,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219972|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29619|TSSclassifier=S|UniProt=Q2M385|association_with_transcript=32bp_to_BC104997,BC112230_5end|coexpression_cluster_id=C26|description=CAGE_peak_5_at_MPEG1_5end|id=chr11:58980322..58980326,-|ontology_enrichment_celltype=CL:0002057!8.18e-71!42;CL:0002009!1.04e-67!65;CL:0000860!3.14e-65!45;CL:0000766!1.94e-64!76;CL:0002194!4.66e-64!63;CL:0000576!4.66e-64!63;CL:0000040!4.66e-64!63;CL:0000559!4.66e-64!63;CL:0000557!1.30e-63!71;CL:0000839!2.92e-56!70;CL:0000738!1.71e-53!140;CL:0000763!5.81e-50!112;CL:0000049!5.81e-50!112;CL:0002087!1.30e-46!119;CL:0000037!4.69e-46!172;CL:0000566!4.69e-46!172;CL:0000988!1.92e-42!182;CL:0002031!1.40e-40!124;CL:0002032!1.41e-40!165;CL:0000837!1.41e-40!165;CL:0002393!1.02e-13!9;CL:0002397!1.02e-13!9;CL:0000134!7.85e-13!358;CL:0002320!3.10e-12!365;CL:0000219!3.76e-10!390;CL:0000048!1.02e-07!430;CL:0000723!2.22e-07!436;CL:0002619!3.20e-07!3;CL:0000842!5.27e-07!3;CL:0000094!5.78e-07!8;CL:0000034!6.04e-07!444;CL:0000784!9.89e-07!3|ontology_enrichment_celltype_v019=CL:0000860;4.91e-72;33!CL:0002057;4.91e-72;33!CL:0000473;3.09e-61;39!CL:0000234;3.09e-61;39!CL:0000576;4.64e-58;48!CL:0000766;5.95e-39;69!CL:0000763;1.44e-17;100!CL:0000738;9.75e-13;136!CL:0002087;9.66e-12;104!CL:0002393;6.21e-11;6!CL:0002397;6.21e-11;6!CL:0000771;6.62e-10;2!CL:0000094;4.52e-09;8!CL:0000988;4.70e-07;177!CL:0000775;7.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,2.11e-89,48;CL:0000234,2.11e-89,48;CL:0000860,6.97e-85,42;CL:0002057,6.97e-85,42;CL:0002009,2.83e-81,61;CL:0000766,4.62e-81,72;CL:0002194,2.64e-79,59;CL:0000576,2.64e-79,59;CL:0000040,2.64e-79,59;CL:0000559,2.64e-79,59;CL:0000557,1.07e-77,67;CL:0000839,3.43e-70,66;CL:0000763,1.60e-57,108;CL:0000049,1.60e-57,108;CL:0000738,5.26e-49,136;CL:0002087,4.24e-42,115;CL:0000037,3.97e-40,168;CL:0002031,1.07e-37,120;CL:0000988,1.20e-37,177;CL:0002032,7.28e-36,161;CL:0000837,7.28e-36,161;CL:0000134,2.32e-14,354;CL:0002320,6.61e-14,361;CL:0000219,2.66e-12,386;CL:0002393,5.19e-11,9;CL:0002397,5.19e-11,9;CL:0000048,2.44e-10,427;CL:0000723,4.55e-10,433;CL:0000771,4.66e-10,2;CL:0000034,1.02e-09,441;CL:0000094,4.25e-09,8;CL:0000775,8.45e-07,3|ontology_enrichment_development_v019=CL:0002057;5.92e-58;42!CL:0000049;9.10e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.26e-67!102;UBERON:0003061!1.26e-67!102;UBERON:0002193!4.41e-62!112;UBERON:0002371!8.59e-55!80;UBERON:0001474!6.22e-50!86;UBERON:0002405!3.18e-45!115;UBERON:0004765!2.62e-40!101;UBERON:0001434!2.62e-40!101;UBERON:0003081!1.53e-26!216;UBERON:0002204!1.17e-20!167;UBERON:0002384!5.38e-12!375;UBERON:0000926!1.10e-08!448;UBERON:0004120!1.10e-08!448;UBERON:0006603!1.10e-08!448;UBERON:0000178!1.22e-07!15;UBERON:0000179!1.22e-07!15;UBERON:0000463!1.22e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-67,76;UBERON:0002390,1.07e-63,98;UBERON:0003061,1.07e-63,98;UBERON:0001474,3.57e-62,82;UBERON:0002193,4.59e-57,108;UBERON:0004765,5.49e-56,90;UBERON:0002405,6.15e-54,93;UBERON:0001434,1.25e-49,100;UBERON:0002204,2.96e-28,167;UBERON:0003081,1.93e-26,203;UBERON:0000926,6.06e-15,315;UBERON:0004120,6.06e-15,315;UBERON:0006603,6.06e-15,315;UBERON:0002384,2.76e-13,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619264493264304,0,0,0,0.0774672005803016,0,0,1.66198622559563,1.60435557976113,0.868043482863407,1.11957737119962,0.971680998056939,3.09090681161024,3.92575244704825,2.64513160582167,1.94067248950253,0.929716147622738,1.23350366406548,3.40677007984614,2.01384674625505,1.0246428261164,5.43909128743746,1.72372840368309,2.5819387343353,4.06279459783025,2.44715041405386,2.45615535052061,0.898893937780338,1.53041946185451,3.20929027076094,0.639337125799041,0.989553900560148,2.39356389145958,2.55734850319616,0.870627715885752,0,1.86846674698672,2.00998932205395,2.08593167368081,3.9093992046921,0,1.84138817993782,0.949387162322653,1.05627643155971,0.637812899895131,1.46761051855863,3.59451619668784,3.75442232103766,4.50031642751824,0,0.39783335439818,1.27864907635244,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.451725357233318,0.127986611154418,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,0,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.50677127429638,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,3.74503511973591,0,2.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29619 | |||
|TSSclassifier=S | |||
|UniProt=Q2M385 | |||
|association_with_transcript=32bp_to_BC104997,BC112230_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_MPEG1_5end | |||
|id=chr11:58980322..58980326,- | |||
|ontology_enrichment_celltype=CL:0002057!8.18e-71!42;CL:0002009!1.04e-67!65;CL:0000860!3.14e-65!45;CL:0000766!1.94e-64!76;CL:0002194!4.66e-64!63;CL:0000576!4.66e-64!63;CL:0000040!4.66e-64!63;CL:0000559!4.66e-64!63;CL:0000557!1.30e-63!71;CL:0000839!2.92e-56!70;CL:0000738!1.71e-53!140;CL:0000763!5.81e-50!112;CL:0000049!5.81e-50!112;CL:0002087!1.30e-46!119;CL:0000037!4.69e-46!172;CL:0000566!4.69e-46!172;CL:0000988!1.92e-42!182;CL:0002031!1.40e-40!124;CL:0002032!1.41e-40!165;CL:0000837!1.41e-40!165;CL:0002393!1.02e-13!9;CL:0002397!1.02e-13!9;CL:0000134!7.85e-13!358;CL:0002320!3.10e-12!365;CL:0000219!3.76e-10!390;CL:0000048!1.02e-07!430;CL:0000723!2.22e-07!436;CL:0002619!3.20e-07!3;CL:0000842!5.27e-07!3;CL:0000094!5.78e-07!8;CL:0000034!6.04e-07!444;CL:0000784!9.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.91e-72;33!CL:0002057;4.91e-72;33!CL:0000473;3.09e-61;39!CL:0000234;3.09e-61;39!CL:0000576;4.64e-58;48!CL:0000766;5.95e-39;69!CL:0000763;1.44e-17;100!CL:0000738;9.75e-13;136!CL:0002087;9.66e-12;104!CL:0002393;6.21e-11;6!CL:0002397;6.21e-11;6!CL:0000771;6.62e-10;2!CL:0000094;4.52e-09;8!CL:0000988;4.70e-07;177!CL:0000775;7.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.11e-89,48;CL:0000234,2.11e-89,48;CL:0000860,6.97e-85,42;CL:0002057,6.97e-85,42;CL:0002009,2.83e-81,61;CL:0000766,4.62e-81,72;CL:0002194,2.64e-79,59;CL:0000576,2.64e-79,59;CL:0000040,2.64e-79,59;CL:0000559,2.64e-79,59;CL:0000557,1.07e-77,67;CL:0000839,3.43e-70,66;CL:0000763,1.60e-57,108;CL:0000049,1.60e-57,108;CL:0000738,5.26e-49,136;CL:0002087,4.24e-42,115;CL:0000037,3.97e-40,168;CL:0002031,1.07e-37,120;CL:0000988,1.20e-37,177;CL:0002032,7.28e-36,161;CL:0000837,7.28e-36,161;CL:0000134,2.32e-14,354;CL:0002320,6.61e-14,361;CL:0000219,2.66e-12,386;CL:0002393,5.19e-11,9;CL:0002397,5.19e-11,9;CL:0000048,2.44e-10,427;CL:0000723,4.55e-10,433;CL:0000771,4.66e-10,2;CL:0000034,1.02e-09,441;CL:0000094,4.25e-09,8;CL:0000775,8.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.92e-58;42!CL:0000049;9.10e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.26e-67!102;UBERON:0003061!1.26e-67!102;UBERON:0002193!4.41e-62!112;UBERON:0002371!8.59e-55!80;UBERON:0001474!6.22e-50!86;UBERON:0002405!3.18e-45!115;UBERON:0004765!2.62e-40!101;UBERON:0001434!2.62e-40!101;UBERON:0003081!1.53e-26!216;UBERON:0002204!1.17e-20!167;UBERON:0002384!5.38e-12!375;UBERON:0000926!1.10e-08!448;UBERON:0004120!1.10e-08!448;UBERON:0006603!1.10e-08!448;UBERON:0000178!1.22e-07!15;UBERON:0000179!1.22e-07!15;UBERON:0000463!1.22e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-67,76;UBERON:0002390,1.07e-63,98;UBERON:0003061,1.07e-63,98;UBERON:0001474,3.57e-62,82;UBERON:0002193,4.59e-57,108;UBERON:0004765,5.49e-56,90;UBERON:0002405,6.15e-54,93;UBERON:0001434,1.25e-49,100;UBERON:0002204,2.96e-28,167;UBERON:0003081,1.93e-26,203;UBERON:0000926,6.06e-15,315;UBERON:0004120,6.06e-15,315;UBERON:0006603,6.06e-15,315;UBERON:0002384,2.76e-13,371 | |||
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|short_description=p5@MPEG1 | |||
}} |
Revision as of 18:15, 10 September 2013
Short description: | p5@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_MPEG1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 32bp_to_BC104997, BC112230_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | Q2M385 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-67 | 76 |
hematopoietic system | 1.07e-63 | 98 |
blood island | 1.07e-63 | 98 |
bone element | 3.57e-62 | 82 |
hemolymphoid system | 4.59e-57 | 108 |
skeletal element | 5.49e-56 | 90 |
immune system | 6.15e-54 | 93 |
skeletal system | 1.25e-49 | 100 |
musculoskeletal system | 2.96e-28 | 167 |
lateral plate mesoderm | 1.93e-26 | 203 |
mesoderm | 6.06e-15 | 315 |
mesoderm-derived structure | 6.06e-15 | 315 |
presumptive mesoderm | 6.06e-15 | 315 |
connective tissue | 2.76e-13 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.