FFCP PHASE1:Hg19::chr11:58979908..58979915,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=219972|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=29619|TSSclassifier=N|UniProt=|association_with_transcript=-335bp_to_AK095457_5end|coexpression_cluster_id=C26|description=CAGE_peak_7_at_MPEG1_5end|id=chr11:58979908..58979915,-|ontology_enrichment_celltype=CL:0002057!5.40e-124!42;CL:0000860!4.43e-115!45;CL:0002009!1.22e-96!65;CL:0002194!2.27e-95!63;CL:0000576!2.27e-95!63;CL:0000040!2.27e-95!63;CL:0000559!2.27e-95!63;CL:0000557!1.01e-87!71;CL:0000839!5.93e-85!70;CL:0000766!1.78e-81!76;CL:0002087!2.82e-61!119;CL:0000738!9.02e-58!140;CL:0000763!1.88e-57!112;CL:0000049!1.88e-57!112;CL:0002031!7.59e-56!124;CL:0000037!5.20e-45!172;CL:0000566!5.20e-45!172;CL:0002032!2.63e-43!165;CL:0000837!2.63e-43!165;CL:0000988!6.16e-42!182;CL:0002393!4.54e-18!9;CL:0002397!4.54e-18!9;CL:0000134!8.28e-16!358;CL:0002320!2.75e-15!365;CL:0000219!1.89e-13!390;CL:0000048!2.98e-11!430;CL:0000723!6.11e-11!436;CL:0000034!1.55e-10!444|ontology_enrichment_celltype_v019=CL:0000860;3.80e-129;33!CL:0002057;3.80e-129;33!CL:0000473;1.91e-96;39!CL:0000234;1.91e-96;39!CL:0000576;1.99e-74;48!CL:0000766;3.44e-42;69!CL:0000763;3.26e-21;100!CL:0002087;3.04e-16;104!CL:0000738;2.16e-12;136!CL:0000988;3.56e-08;177|ontology_enrichment_celltype_v019_2=CL:0000860,3.15e-135,42;CL:0002057,3.15e-135,42;CL:0000473,3.37e-125,48;CL:0000234,3.37e-125,48;CL:0002194,4.93e-99,59;CL:0000576,4.93e-99,59;CL:0000040,4.93e-99,59;CL:0000559,4.93e-99,59;CL:0002009,1.18e-95,61;CL:0000839,4.28e-88,66;CL:0000557,1.03e-86,67;CL:0000766,1.70e-85,72;CL:0000763,2.36e-55,108;CL:0000049,2.36e-55,108;CL:0002087,1.89e-48,115;CL:0002031,3.31e-46,120;CL:0000738,7.62e-43,136;CL:0002032,2.54e-35,161;CL:0000837,2.54e-35,161;CL:0000037,1.30e-33,168;CL:0000988,1.30e-31,177;CL:0000134,8.44e-13,354;CL:0002320,1.97e-12,361;CL:0000219,3.93e-11,386;CL:0000048,1.54e-09,427;CL:0000723,2.56e-09,433;CL:0000034,4.93e-09,441|ontology_enrichment_development_v019=CL:0002057;4.33e-95;42!CL:0000049;2.53e-19;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.11e-77!80;UBERON:0001474!8.43e-71!86;UBERON:0002390!4.58e-70!102;UBERON:0003061!4.58e-70!102;UBERON:0002193!6.63e-63!112;UBERON:0004765!7.47e-59!101;UBERON:0001434!7.47e-59!101;UBERON:0002405!5.72e-53!115;UBERON:0002204!1.26e-31!167;UBERON:0003081!5.58e-29!216;UBERON:0002384!1.41e-14!375;UBERON:0000926!5.97e-09!448;UBERON:0004120!5.97e-09!448;UBERON:0006603!5.97e-09!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.50e-76,76;UBERON:0001474,5.18e-70,82;UBERON:0004765,2.37e-63,90;UBERON:0002405,3.81e-61,93;UBERON:0002390,9.13e-58,98;UBERON:0003061,9.13e-58,98;UBERON:0001434,1.66e-56,100;UBERON:0002193,6.20e-52,108;UBERON:0002204,1.24e-31,167;UBERON:0003081,5.38e-25,203;UBERON:0000926,5.63e-14,315;UBERON:0004120,5.63e-14,315;UBERON:0006603,5.63e-14,315;UBERON:0002384,6.28e-12,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0.32389366601898,0,3.92575244704825,3.40088349319928,2.66842467306598,3.48643555358527,2.46700732813095,1.85823822537062,2.58923153089935,1.2808035326455,2.36482229888585,3.10271112662957,2.5819387343353,0,1.88242339542605,2.45615535052061,0.898893937780338,1.53041946185451,0.641858054152187,3.19668562899521,2.96866170168044,3.39088217956774,1.70489900213078,3.77272010217159,1.70215567407342,1.24564449799115,2.00998932205395,2.60741459210101,1.73751075764093,1.81619850790011,2.20966581592539,2.84816148696796,2.74631872205524,1.27562579979026,0.628975936525128,0.561643155732475,2.55300717830561,3.2145117339416,0,1.39241674039363,0.91332076882317,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=219972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29619 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-335bp_to_AK095457_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_7_at_MPEG1_5end | |||
|id=chr11:58979908..58979915,- | |||
|ontology_enrichment_celltype=CL:0002057!5.40e-124!42;CL:0000860!4.43e-115!45;CL:0002009!1.22e-96!65;CL:0002194!2.27e-95!63;CL:0000576!2.27e-95!63;CL:0000040!2.27e-95!63;CL:0000559!2.27e-95!63;CL:0000557!1.01e-87!71;CL:0000839!5.93e-85!70;CL:0000766!1.78e-81!76;CL:0002087!2.82e-61!119;CL:0000738!9.02e-58!140;CL:0000763!1.88e-57!112;CL:0000049!1.88e-57!112;CL:0002031!7.59e-56!124;CL:0000037!5.20e-45!172;CL:0000566!5.20e-45!172;CL:0002032!2.63e-43!165;CL:0000837!2.63e-43!165;CL:0000988!6.16e-42!182;CL:0002393!4.54e-18!9;CL:0002397!4.54e-18!9;CL:0000134!8.28e-16!358;CL:0002320!2.75e-15!365;CL:0000219!1.89e-13!390;CL:0000048!2.98e-11!430;CL:0000723!6.11e-11!436;CL:0000034!1.55e-10!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-129;33!CL:0002057;3.80e-129;33!CL:0000473;1.91e-96;39!CL:0000234;1.91e-96;39!CL:0000576;1.99e-74;48!CL:0000766;3.44e-42;69!CL:0000763;3.26e-21;100!CL:0002087;3.04e-16;104!CL:0000738;2.16e-12;136!CL:0000988;3.56e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.15e-135,42;CL:0002057,3.15e-135,42;CL:0000473,3.37e-125,48;CL:0000234,3.37e-125,48;CL:0002194,4.93e-99,59;CL:0000576,4.93e-99,59;CL:0000040,4.93e-99,59;CL:0000559,4.93e-99,59;CL:0002009,1.18e-95,61;CL:0000839,4.28e-88,66;CL:0000557,1.03e-86,67;CL:0000766,1.70e-85,72;CL:0000763,2.36e-55,108;CL:0000049,2.36e-55,108;CL:0002087,1.89e-48,115;CL:0002031,3.31e-46,120;CL:0000738,7.62e-43,136;CL:0002032,2.54e-35,161;CL:0000837,2.54e-35,161;CL:0000037,1.30e-33,168;CL:0000988,1.30e-31,177;CL:0000134,8.44e-13,354;CL:0002320,1.97e-12,361;CL:0000219,3.93e-11,386;CL:0000048,1.54e-09,427;CL:0000723,2.56e-09,433;CL:0000034,4.93e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.33e-95;42!CL:0000049;2.53e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.11e-77!80;UBERON:0001474!8.43e-71!86;UBERON:0002390!4.58e-70!102;UBERON:0003061!4.58e-70!102;UBERON:0002193!6.63e-63!112;UBERON:0004765!7.47e-59!101;UBERON:0001434!7.47e-59!101;UBERON:0002405!5.72e-53!115;UBERON:0002204!1.26e-31!167;UBERON:0003081!5.58e-29!216;UBERON:0002384!1.41e-14!375;UBERON:0000926!5.97e-09!448;UBERON:0004120!5.97e-09!448;UBERON:0006603!5.97e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.50e-76,76;UBERON:0001474,5.18e-70,82;UBERON:0004765,2.37e-63,90;UBERON:0002405,3.81e-61,93;UBERON:0002390,9.13e-58,98;UBERON:0003061,9.13e-58,98;UBERON:0001434,1.66e-56,100;UBERON:0002193,6.20e-52,108;UBERON:0002204,1.24e-31,167;UBERON:0003081,5.38e-25,203;UBERON:0000926,5.63e-14,315;UBERON:0004120,5.63e-14,315;UBERON:0006603,5.63e-14,315;UBERON:0002384,6.28e-12,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,0.217010870715852,0.223915474239924,0.32389366601898,0,3.92575244704825,3.40088349319928,2.66842467306598,3.48643555358527,2.46700732813095,1.85823822537062,2.58923153089935,1.2808035326455,2.36482229888585,3.10271112662957,2.5819387343353,0,1.88242339542605,2.45615535052061,0.898893937780338,1.53041946185451,0.641858054152187,3.19668562899521,2.96866170168044,3.39088217956774,1.70489900213078,3.77272010217159,1.70215567407342,1.24564449799115,2.00998932205395,2.60741459210101,1.73751075764093,1.81619850790011,2.20966581592539,2.84816148696796,2.74631872205524,1.27562579979026,0.628975936525128,0.561643155732475,2.55300717830561,3.2145117339416,0,1.39241674039363,0.91332076882317,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p7@MPEG1 | |||
}} |
Revision as of 18:15, 10 September 2013
Short description: | p7@MPEG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MPEG1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -335bp_to_AK095457_5end |
EntrezGene: | MPEG1 |
HGNC: | 29619 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.15e-135 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.15e-135 | 42 |
defensive cell | 3.37e-125 | 48 |
phagocyte | 3.37e-125 | 48 |
monopoietic cell | 4.93e-99 | 59 |
monocyte | 4.93e-99 | 59 |
monoblast | 4.93e-99 | 59 |
promonocyte | 4.93e-99 | 59 |
macrophage dendritic cell progenitor | 1.18e-95 | 61 |
myeloid lineage restricted progenitor cell | 4.28e-88 | 66 |
granulocyte monocyte progenitor cell | 1.03e-86 | 67 |
myeloid leukocyte | 1.70e-85 | 72 |
myeloid cell | 2.36e-55 | 108 |
common myeloid progenitor | 2.36e-55 | 108 |
nongranular leukocyte | 1.89e-48 | 115 |
hematopoietic lineage restricted progenitor cell | 3.31e-46 | 120 |
leukocyte | 7.62e-43 | 136 |
hematopoietic oligopotent progenitor cell | 2.54e-35 | 161 |
hematopoietic multipotent progenitor cell | 2.54e-35 | 161 |
hematopoietic stem cell | 1.30e-33 | 168 |
hematopoietic cell | 1.30e-31 | 177 |
mesenchymal cell | 8.44e-13 | 354 |
connective tissue cell | 1.97e-12 | 361 |
motile cell | 3.93e-11 | 386 |
multi fate stem cell | 1.54e-09 | 427 |
somatic stem cell | 2.56e-09 | 433 |
stem cell | 4.93e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.50e-76 | 76 |
bone element | 5.18e-70 | 82 |
skeletal element | 2.37e-63 | 90 |
immune system | 3.81e-61 | 93 |
hematopoietic system | 9.13e-58 | 98 |
blood island | 9.13e-58 | 98 |
skeletal system | 1.66e-56 | 100 |
hemolymphoid system | 6.20e-52 | 108 |
musculoskeletal system | 1.24e-31 | 167 |
lateral plate mesoderm | 5.38e-25 | 203 |
mesoderm | 5.63e-14 | 315 |
mesoderm-derived structure | 5.63e-14 | 315 |
presumptive mesoderm | 5.63e-14 | 315 |
connective tissue | 6.28e-12 | 371 |
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