FFCP PHASE1:Hg19::chr11:46403248..46403270,+: Difference between revisions
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{{FFCP | 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01107,1.33982065078089,0,0.413731983447581,4.05144565611864,21.4257988317366,10.334225573761,7.75933928698224,21.3050538903166,0.318235791390825,5.65928129083014,1.52401723527873,4.10679961302337,3.7717149688169,8.03288700397975,17.9636592534847,87.6713202940195,21.8791059049317,36.6837336345186,41.31959296903,21.1176848163109,10.6350056439094,98.4688751524087,0,4.6292972525936,0|short_description=p2@MDK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4192 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000481047_5end | |||
|description=CAGE_peak_2_at_MDK_5end | |||
|id=chr11:46403248..46403270,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.05e-19!248;CL:0000220!6.14e-19!246;CL:0000066!3.97e-18!254;CL:0000222!1.15e-13!119;CL:0000055!1.15e-10!180;CL:0000393!2.86e-09!60;CL:0000211!2.86e-09!60;CL:0000183!5.78e-09!59;CL:0000115!1.00e-07!35;CL:0000187!1.24e-07!54;CL:0002078!1.75e-07!44;CL:0000680!3.27e-07!57;CL:0000056!3.27e-07!57;CL:0000355!3.27e-07!57;CL:0002139!3.89e-07!24;CL:0000213!4.01e-07!57;CL:0000215!4.01e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.79e-07;24!CL:0000115;9.60e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.00e-20,250;CL:0000066,6.81e-18,253;CL:0000222,2.10e-14,121;CL:0000393,9.68e-10,61;CL:0000211,9.68e-10,61;CL:0000115,4.07e-08,36;CL:0000187,4.71e-08,55;CL:0002078,5.54e-08,45;CL:0000213,1.63e-07,58;CL:0000215,1.63e-07,58;CL:0000680,1.91e-07,58;CL:0000056,1.91e-07,58;CL:0000355,1.91e-07,58;CL:0002139,2.86e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.21e-10!143;DOID:3095!4.70e-07!22;DOID:2994!4.70e-07!22;DOID:305!5.23e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.18e-07;22!DOID:2994;3.18e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.42e-10,143;DOID:305,2.30e-07,106;DOID:3095,2.88e-07,22;DOID:2994,2.88e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000119!1.35e-17!312;UBERON:0000483!1.40e-17!309;UBERON:0000490!1.18e-15!138;UBERON:0000481!2.35e-14!347;UBERON:0003914!2.58e-13!118;UBERON:0005256!1.46e-12!143;UBERON:0000468!6.45e-11!659;UBERON:0004111!8.01e-11!241;UBERON:0000477!1.50e-10!286;UBERON:0000475!2.33e-10!365;UBERON:0002049!4.32e-10!79;UBERON:0007798!4.32e-10!79;UBERON:0000922!1.75e-09!612;UBERON:0002100!2.22e-09!216;UBERON:0003104!4.04e-09!238;UBERON:0009142!4.04e-09!238;UBERON:0000025!9.29e-09!194;UBERON:0006554!1.09e-07!44;UBERON:0002050!1.28e-07!605;UBERON:0005423!1.28e-07!605;UBERON:0000055!1.86e-07!69;UBERON:0004872!2.13e-07!84;UBERON:0000923!2.50e-07!604;UBERON:0005291!2.50e-07!604;UBERON:0006598!2.50e-07!604;UBERON:0002532!2.50e-07!604;UBERON:0001008!4.21e-07!45;UBERON:0000467!5.64e-07!625;UBERON:0004119!6.52e-07!169;UBERON:0000925!6.52e-07!169;UBERON:0006595!6.52e-07!169;UBERON:0005911!7.85e-07!82;UBERON:0002385!8.23e-07!63;UBERON:0001015!8.23e-07!63;UBERON:0000383!8.23e-07!63;UBERON:0000480!8.98e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001456;7.07e-07;21!UBERON:0000970;7.28e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.30e-15,309;UBERON:0000483,1.36e-15,306;UBERON:0003104,4.09e-14,160;UBERON:0009142,4.09e-14,160;UBERON:0000490,6.40e-14,148;UBERON:0003914,4.87e-13,117;UBERON:0005256,1.51e-10,122;UBERON:0002049,4.53e-10,78;UBERON:0007798,4.53e-10,78;UBERON:0004111,3.48e-09,240;UBERON:0004119,1.10e-08,160;UBERON:0000925,1.10e-08,160;UBERON:0006595,1.10e-08,160;UBERON:0002100,1.28e-08,199;UBERON:0006554,2.27e-08,47;UBERON:0000922,2.93e-08,592;UBERON:0001008,8.06e-08,48;UBERON:0000055,1.94e-07,68;UBERON:0005423,2.83e-07,581;UBERON:0004872,2.91e-07,83;UBERON:0000025,4.02e-07,192;UBERON:0002385,6.18e-07,64;UBERON:0001015,6.18e-07,64;UBERON:0000383,6.18e-07,64;UBERON:0007503,6.56e-07,78;UBERON:0001134,8.79e-07,62;UBERON:0002036,8.79e-07,62;UBERON:0003082,8.79e-07,62 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,2.00146596706261,0.893922188854576,0,0,3.15859936713415,2.08948502559871,17.2013755551056,55.1262922698218,25.3391991671,34.289707169699,17.9461211792068,11.930305526205,10.0848771967766,12.6565850885035,16.7971320789096,19.0293791528298,41.2455544557239,60.7922059907874,97.7978731011634,82.1497283066133,66.247221735276,79.2174055843206,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,1.08371286321253,2.75826367343678,3.0120591877825,2.58827807116751,0,0,4.40400659002271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,42.9248550210327,29.664114347699,4.69870898099936,9.02408239144601,6.0835537963546,3.9764297352555,5.83961844363163,68.3486728096211,62.7494194819056,91.963020620703,5.43563163315507,13.1146303785315,5.19098219898201,0,0,0.26591592103773,0,0,0,19.6774783293038,11.1830497363796,11.108496051443,11.3061588384802,23.0724689915448,34.6648732844485,17.3465822225553,15.5050055501597,21.7017420238893,12.7193832850575,33.8376626371683,24.3287073829924,88.8385889475337,5.51494620518803,46.1780910292603,15.627452449714,16.6151735743366,21.8466272137645,35.2628266171531,7.59412527654503,36.2739452982206,0,0,8.28578699070815,1.98788780678127,5.57174251324151,2.91300197789081,15.4891775204359,11.3493882303474,7.8494864019923,3.20246987189115,5.92002116201184,11.2035972743916,6.60082293141472,4.25000948094993,4.8434376846378,4.03323147135999,18.7457145467037,1.24864030732128,2.2818872861778,1.79338416662161,6.6937664226946,3.0755859429945,2.94946694074722,1.02077085627447,11.0550885580591,3.30642499762449,53.4601285776924,31.6501669476553,3.64064544775211,2.15585442544872,7.57512512793298,14.01327422566,1.10825646193673,11.8523957637826,8.58165828237255,32.3011826649183,10.0954643012419,3.04962380671065,10.0371972744727,4.87443372666992,7.50227740211006,6.49230934202165,3.09168648054755,7.258557396932,7.93248761533951,4.28722822709274,2.77677151668526,7.08784219545705,10.0220555227663,11.005297368015,7.2541510723901,12.8866050155971,0.773043412653187,0.818238361772504,2.86804595389004,49.2773772763565,47.0480677541273,59.2589108634544,58.6721571386997,73.4253676048079,36.8627132666588,0,1.92972281457866,0,3.71494342425583,10.8281922250438,0,0,0,0,0,0,0.134831308160164,0,0,31.7406845488599,81.3402288059986,58.4435096090588,195.521586142771,0,0,0,0.441463099414651,34.4367627920718,49.4115293659754,0.329250856225877,2.24803506515239,0.502644862058154,10.7402596383894,35.8389135841357,6.23960871167747,31.7528952455601,196.84982764768,41.445269065245,54.4261508059248,48.6134788205441,38.2410845991542,15.8040879591855,14.5942647556128,0,0,0.297262324577456,0,1.84780341018745,2.41017665312057,0.358234090811393,0,0.766765358330422,0.492663237895943,0.088048434013226,1.03664057770386,0.432359860250884,0.6312121671319,1.77794104018073,0.381988425558278,1.17217447210047,5.13217338068116,0.411309970813294,0,2.00078502841405,3.1396703616701,16.5664826156646,2.12681028880755,11.6344544182,25.0359512096318,3.381211010224,15.1584726453376,11.4408180602503,22.8914563093306,34.0437916855868,21.5801965003041,17.1573592389777,103.098105024374,37.0458151551346,0.977208552881205,31.9852753868291,25.3424599338697,9.64606006590676,33.1182714268112,5.99837947092342,0,0,0,3.83399768786532,13.7834323000937,5.70547620162874,0.868687840005475,4.72595541865882,5.37182889719687,0,0,0,0,18.8030021924623,20.8223766172195,17.0123538811093,22.112147024134,17.2243462946354,0,0,0,52.5119584557919,59.0201214850419,18.446021611582,2.07970861530807,2.14114786556594,2.20783381047509,0,6.3198680942821,36.3852006489576,25.8682678231262,19.9267679560631,25.442945258755,11.8161715676593,20.9507238485132,20.9317488524622,0,0,0,17.2782715724368,44.9375686678342,160.266855464731,0.248107807818777,0.767309866440312,2.52594084989766,0.128139149255701,2.04682899626681,1.28683136914886,1.48418066444991,1.69630663182921,3.55123450626254,2.29956036838666,4.67328986265259,3.02146983995894,90.8863060928999,9.42380410425439,23.7568951454613,12.7444037462713,20.9404843207725,43.27105693661,55.0463527747042,12.0914079253931,120.789864453236,90.6063192850216,15.0938829316812,26.1586783363062,10.2056223165909,12.9549549661284,52.4372659146984,50.9379302582443,96.3244365801318,5.09752546090077,12.4661401339309,45.4465752086022,0,0,82.0640400372445,52.8103579576526,12.6897573919078,2.06082023295445,6.22672360764735,5.36311749483822,12.0595762979196,4.55042172225565,4.82051789532479,24.4576917279069,8.16457670707615,9.21022048356777,7.85668463161824,17.8317606481334,25.5229381289042,20.7100704621125,18.7857595214616,4.29740779938543,4.80475168412765,8.29482631214797,13.5551426346437,2.32422774648643,11.0184321390724,6.2733354314454,42.8166676444763,9.58150854570639,6.0895309445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| |||
|short_description=p2@MDK | |||
}} |
Revision as of 17:55, 10 September 2013
Short description: | p2@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000481047_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.00e-20 | 250 |
epithelial cell | 6.81e-18 | 253 |
mesodermal cell | 2.10e-14 | 121 |
electrically responsive cell | 9.68e-10 | 61 |
electrically active cell | 9.68e-10 | 61 |
endothelial cell | 4.07e-08 | 36 |
muscle cell | 4.71e-08 | 55 |
meso-epithelial cell | 5.54e-08 | 45 |
lining cell | 1.63e-07 | 58 |
barrier cell | 1.63e-07 | 58 |
muscle precursor cell | 1.91e-07 | 58 |
myoblast | 1.91e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-07 | 58 |
endothelial cell of vascular tree | 2.86e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.30e-15 | 309 |
epithelium | 1.36e-15 | 306 |
mesenchyme | 4.09e-14 | 160 |
entire embryonic mesenchyme | 4.09e-14 | 160 |
unilaminar epithelium | 6.40e-14 | 148 |
epithelial tube | 4.87e-13 | 117 |
trunk mesenchyme | 1.51e-10 | 122 |
vasculature | 4.53e-10 | 78 |
vascular system | 4.53e-10 | 78 |
anatomical conduit | 3.48e-09 | 240 |
endoderm-derived structure | 1.10e-08 | 160 |
endoderm | 1.10e-08 | 160 |
presumptive endoderm | 1.10e-08 | 160 |
trunk | 1.28e-08 | 199 |
urinary system structure | 2.27e-08 | 47 |
embryo | 2.93e-08 | 592 |
renal system | 8.06e-08 | 48 |
vessel | 1.94e-07 | 68 |
developing anatomical structure | 2.83e-07 | 581 |
splanchnic layer of lateral plate mesoderm | 2.91e-07 | 83 |
tube | 4.02e-07 | 192 |
muscle tissue | 6.18e-07 | 64 |
musculature | 6.18e-07 | 64 |
musculature of body | 6.18e-07 | 64 |
epithelial vesicle | 6.56e-07 | 78 |
skeletal muscle tissue | 8.79e-07 | 62 |
striated muscle tissue | 8.79e-07 | 62 |
myotome | 8.79e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.42e-10 | 143 |
carcinoma | 2.30e-07 | 106 |
germ cell and embryonal cancer | 2.88e-07 | 22 |
germ cell cancer | 2.88e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.