FFCP PHASE1:Hg19::chr11:32851278..32851318,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79056|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30799|TSSclassifier=W|UniProt=Q9BZD6|association_with_transcript=-162bp_to_NM_024081_5end|description=CAGE_peak_3_at_PRRG4_5end|id=chr11:32851278..32851318,+|ontology_enrichment_celltype=CL:0000763!1.04e-29!112;CL:0000049!1.04e-29!112;CL:0002194!5.07e-29!63;CL:0000576!5.07e-29!63;CL:0000040!5.07e-29!63;CL:0000559!5.07e-29!63;CL:0002009!1.22e-28!65;CL:0000839!7.16e-28!70;CL:0000766!1.45e-27!76;CL:0000557!1.69e-27!71;CL:0000860!5.57e-23!45;CL:0002057!5.17e-21!42;CL:0000037!1.77e-17!172;CL:0000566!1.77e-17!172;CL:0002032!5.94e-17!165;CL:0000837!5.94e-17!165;CL:0000988!1.12e-16!182;CL:0000738!2.09e-14!140;CL:0002087!1.42e-13!119;CL:0002031!1.18e-12!124;CL:0002393!5.22e-07!9;CL:0002397!5.22e-07!9|ontology_enrichment_celltype_v019=CL:0000576;3.23e-24;48!CL:0000473;1.41e-20;39!CL:0000234;1.41e-20;39!CL:0000860;9.48e-19;33!CL:0002057;9.48e-19;33!CL:0000766;3.02e-17;69!CL:0000763;3.20e-13;100!CL:0002393;2.15e-09;6!CL:0002397;2.15e-09;6!CL:0000738;1.05e-08;136!CL:0000990;1.49e-07;8!CL:0002087;5.24e-07;104!CL:0000235;7.81e-07;6|ontology_enrichment_celltype_v019_2=CL:0000763,7.21e-48,108;CL:0000049,7.21e-48,108;CL:0002009,1.42e-45,61;CL:0002194,1.62e-45,59;CL:0000576,1.62e-45,59;CL:0000040,1.62e-45,59;CL:0000559,1.62e-45,59;CL:0000766,2.26e-42,72;CL:0000557,2.66e-42,67;CL:0000839,6.54e-41,66;CL:0000473,4.94e-36,48;CL:0000234,4.94e-36,48;CL:0000037,6.84e-34,168;CL:0000988,3.72e-33,177;CL:0002032,1.13e-32,161;CL:0000837,1.13e-32,161;CL:0000860,9.89e-31,42;CL:0002057,9.89e-31,42;CL:0000738,5.99e-28,136;CL:0002087,1.58e-25,115;CL:0002031,1.16e-23,120;CL:0002393,1.90e-12,9;CL:0002397,1.90e-12,9;CL:0000134,7.71e-08,354;CL:0000990,8.97e-08,8;CL:0002320,2.61e-07,361;CL:0000219,5.95e-07,386|ontology_enrichment_development_v019=CL:0002057;1.63e-21;42!CL:0000049;2.10e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.47e-31!112;UBERON:0002390!2.80e-30!102;UBERON:0003061!2.80e-30!102;UBERON:0002371!6.36e-25!80;UBERON:0001474!5.96e-21!86;UBERON:0002405!1.07e-19!115;UBERON:0004765!1.58e-15!101;UBERON:0001434!1.58e-15!101;UBERON:0007023!3.45e-09!115;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0003081!8.23e-07!216|ontology_enrichment_uberon_v019=UBERON:0000178;4.73e-11;15!UBERON:0000179;4.73e-11;15!UBERON:0000463;4.73e-11;15!UBERON:0002390;2.61e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.97e-46,98;UBERON:0003061,4.97e-46,98;UBERON:0002193,2.65e-41,108;UBERON:0002371,9.88e-39,76;UBERON:0001474,1.16e-34,82;UBERON:0002405,2.08e-31,93;UBERON:0004765,4.26e-30,90;UBERON:0001434,1.91e-25,100;UBERON:0003081,2.91e-12,203;UBERON:0000178,5.41e-11,15;UBERON:0000179,5.41e-11,15;UBERON:0000463,5.41e-11,15;UBERON:0002204,2.66e-09,167;UBERON:0002384,9.72e-08,371|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,1.83392173795083,1.88831355734875,1.57421562627358,0.786728553697808,0,2.63187409637329,0,0,0,0,0,2.05520307534393,4.9859586767869,2.20598892217156,2.17010870715852,3.58264758783879,2.91504299417082,3.09090681161024,2.18097358169347,2.26725566213286,2.66842467306598,1.16214518452842,0,0.619412741790207,0.863077176966451,1.0246428261164,1.6553756092201,0.689491361473237,1.29096936716765,5.41705946377367,1.69418105588344,0.272906150057846,1.12361742222542,1.83650335422542,0.320929027076094,1.27867425159808,1.9791078011203,0.598390972864896,1.27867425159808,0.870627715885752,2.26954089876456,1.24564449799115,1.7587406567972,3.12889751052121,2.17188844705117,1.21079900526674,2.20966581592539,1.26584954976354,1.90129757680748,2.33864729961548,3.56419697364239,4.83013113929929,4.35512989240368,6.58974905458029,1.14005097496499,2.18808344918999,1.46131323011707,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,2.63384084775077,0,0,0.205601498999509,0.668745981562712,0,0,0,0.111410456885174,0,0,0,0.768547918354051,0.260118695119756,0.328875809207352,0.552700035571697,0,0,0,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0.710331756132051,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.263504357079378,0.654895377488563,0.364295288292542,0,3.24547393654683,4.35324343248168,1.72845348674525,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0.573609190778008,0.121973706129595,0.132529768321485,0.232387885739037,0,0,0,1.56449532329816,0,0,0,0,1.30137480043828,1.01150814046861,1.20505514941741,1.43382164552112,2.17879444092406,0.4745412382221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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30799 | |||
|TSSclassifier=W | |||
|UniProt=Q9BZD6 | |||
|association_with_transcript=-162bp_to_NM_024081_5end | |||
|description=CAGE_peak_3_at_PRRG4_5end | |||
|id=chr11:32851278..32851318,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.04e-29!112;CL:0000049!1.04e-29!112;CL:0002194!5.07e-29!63;CL:0000576!5.07e-29!63;CL:0000040!5.07e-29!63;CL:0000559!5.07e-29!63;CL:0002009!1.22e-28!65;CL:0000839!7.16e-28!70;CL:0000766!1.45e-27!76;CL:0000557!1.69e-27!71;CL:0000860!5.57e-23!45;CL:0002057!5.17e-21!42;CL:0000037!1.77e-17!172;CL:0000566!1.77e-17!172;CL:0002032!5.94e-17!165;CL:0000837!5.94e-17!165;CL:0000988!1.12e-16!182;CL:0000738!2.09e-14!140;CL:0002087!1.42e-13!119;CL:0002031!1.18e-12!124;CL:0002393!5.22e-07!9;CL:0002397!5.22e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;3.23e-24;48!CL:0000473;1.41e-20;39!CL:0000234;1.41e-20;39!CL:0000860;9.48e-19;33!CL:0002057;9.48e-19;33!CL:0000766;3.02e-17;69!CL:0000763;3.20e-13;100!CL:0002393;2.15e-09;6!CL:0002397;2.15e-09;6!CL:0000738;1.05e-08;136!CL:0000990;1.49e-07;8!CL:0002087;5.24e-07;104!CL:0000235;7.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.21e-48,108;CL:0000049,7.21e-48,108;CL:0002009,1.42e-45,61;CL:0002194,1.62e-45,59;CL:0000576,1.62e-45,59;CL:0000040,1.62e-45,59;CL:0000559,1.62e-45,59;CL:0000766,2.26e-42,72;CL:0000557,2.66e-42,67;CL:0000839,6.54e-41,66;CL:0000473,4.94e-36,48;CL:0000234,4.94e-36,48;CL:0000037,6.84e-34,168;CL:0000988,3.72e-33,177;CL:0002032,1.13e-32,161;CL:0000837,1.13e-32,161;CL:0000860,9.89e-31,42;CL:0002057,9.89e-31,42;CL:0000738,5.99e-28,136;CL:0002087,1.58e-25,115;CL:0002031,1.16e-23,120;CL:0002393,1.90e-12,9;CL:0002397,1.90e-12,9;CL:0000134,7.71e-08,354;CL:0000990,8.97e-08,8;CL:0002320,2.61e-07,361;CL:0000219,5.95e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-21;42!CL:0000049;2.10e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.47e-31!112;UBERON:0002390!2.80e-30!102;UBERON:0003061!2.80e-30!102;UBERON:0002371!6.36e-25!80;UBERON:0001474!5.96e-21!86;UBERON:0002405!1.07e-19!115;UBERON:0004765!1.58e-15!101;UBERON:0001434!1.58e-15!101;UBERON:0007023!3.45e-09!115;UBERON:0000178!1.66e-07!15;UBERON:0000179!1.66e-07!15;UBERON:0000463!1.66e-07!15;UBERON:0003081!8.23e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.73e-11;15!UBERON:0000179;4.73e-11;15!UBERON:0000463;4.73e-11;15!UBERON:0002390;2.61e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.97e-46,98;UBERON:0003061,4.97e-46,98;UBERON:0002193,2.65e-41,108;UBERON:0002371,9.88e-39,76;UBERON:0001474,1.16e-34,82;UBERON:0002405,2.08e-31,93;UBERON:0004765,4.26e-30,90;UBERON:0001434,1.91e-25,100;UBERON:0003081,2.91e-12,203;UBERON:0000178,5.41e-11,15;UBERON:0000179,5.41e-11,15;UBERON:0000463,5.41e-11,15;UBERON:0002204,2.66e-09,167;UBERON:0002384,9.72e-08,371 | |||
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| |||
|short_description=p3@PRRG4 | |||
}} |
Revision as of 17:29, 10 September 2013
Short description: | p3@PRRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRRG4_5end |
Coexpression cluster: | NA |
Association with transcript: | -162bp_to_NM_024081_5end |
EntrezGene: | PRRG4 |
HGNC: | 30799 |
UniProt: | Q9BZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.21e-48 | 108 |
common myeloid progenitor | 7.21e-48 | 108 |
macrophage dendritic cell progenitor | 1.42e-45 | 61 |
monopoietic cell | 1.62e-45 | 59 |
monocyte | 1.62e-45 | 59 |
monoblast | 1.62e-45 | 59 |
promonocyte | 1.62e-45 | 59 |
myeloid leukocyte | 2.26e-42 | 72 |
granulocyte monocyte progenitor cell | 2.66e-42 | 67 |
myeloid lineage restricted progenitor cell | 6.54e-41 | 66 |
defensive cell | 4.94e-36 | 48 |
phagocyte | 4.94e-36 | 48 |
hematopoietic stem cell | 6.84e-34 | 168 |
hematopoietic cell | 3.72e-33 | 177 |
hematopoietic oligopotent progenitor cell | 1.13e-32 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-32 | 161 |
classical monocyte | 9.89e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.89e-31 | 42 |
leukocyte | 5.99e-28 | 136 |
nongranular leukocyte | 1.58e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 1.16e-23 | 120 |
intermediate monocyte | 1.90e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.90e-12 | 9 |
mesenchymal cell | 7.71e-08 | 354 |
conventional dendritic cell | 8.97e-08 | 8 |
connective tissue cell | 2.61e-07 | 361 |
motile cell | 5.95e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.97e-46 | 98 |
blood island | 4.97e-46 | 98 |
hemolymphoid system | 2.65e-41 | 108 |
bone marrow | 9.88e-39 | 76 |
bone element | 1.16e-34 | 82 |
immune system | 2.08e-31 | 93 |
skeletal element | 4.26e-30 | 90 |
skeletal system | 1.91e-25 | 100 |
lateral plate mesoderm | 2.91e-12 | 203 |
blood | 5.41e-11 | 15 |
haemolymphatic fluid | 5.41e-11 | 15 |
organism substance | 5.41e-11 | 15 |
musculoskeletal system | 2.66e-09 | 167 |
connective tissue | 9.72e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.