FFCP PHASE1:Hg19::chr11:31833719..31833735,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5080|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8620|TSSclassifier=S|UniProt=E9PKM0|association_with_transcript=0bp_to_ENST00000524853_5end|description=CAGE_peak_15_at_PAX6_5end|id=chr11:31833719..31833735,-|ontology_enrichment_celltype=CL:0000064!5.20e-08!3;CL:0005012!5.20e-08!3;CL:0000067!5.20e-08!3;CL:0002304!5.20e-08!3;CL:0002319!5.29e-08!25;CL:0000133!9.49e-07!59|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050687!1.36e-07!143|ontology_enrichment_disease_v019=DOID:6193;5.85e-14;1!DOID:3350;1.27e-07;2!DOID:154;1.93e-07;2!DOID:4236;1.93e-07;2|ontology_enrichment_disease_v019_2=DOID:6193,4.53e-14,1;DOID:3350,1.12e-07,2;DOID:154,1.99e-07,2;DOID:4236,1.99e-07,2|ontology_enrichment_uberon=UBERON:0000073!2.11e-21!94;UBERON:0001016!2.11e-21!94;UBERON:0002346!1.08e-20!90;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0005743!9.50e-19!86;UBERON:0007625!2.00e-16!11;UBERON:0001017!6.62e-16!82;UBERON:0003056!8.99e-16!61;UBERON:0000924!9.58e-16!173;UBERON:0006601!9.58e-16!173;UBERON:0001049!1.46e-15!57;UBERON:0005068!1.46e-15!57;UBERON:0006241!1.46e-15!57;UBERON:0007135!1.46e-15!57;UBERON:0004121!1.82e-15!169;UBERON:0000970!4.16e-12!20;UBERON:0002104!2.09e-11!21;UBERON:0003076!5.00e-11!15;UBERON:0003057!5.00e-11!15;UBERON:0002616!1.15e-10!59;UBERON:0000033!1.22e-10!123;UBERON:0000019!1.60e-10!19;UBERON:0000047!1.60e-10!19;UBERON:0004088!1.60e-10!19;UBERON:0003072!1.60e-10!19;UBERON:0003071!1.60e-10!19;UBERON:0004128!1.60e-10!19;UBERON:0000955!2.46e-10!69;UBERON:0006238!2.46e-10!69;UBERON:0000020!3.43e-10!23;UBERON:0000488!3.54e-10!4;UBERON:0000153!8.85e-10!129;UBERON:0007811!8.85e-10!129;UBERON:0001032!1.16e-09!24;UBERON:0004456!1.16e-09!24;UBERON:0001456!2.61e-09!21;UBERON:0001778!5.20e-08!3;UBERON:0001775!5.20e-08!3;UBERON:0002780!5.32e-08!41;UBERON:0001890!5.32e-08!41;UBERON:0006240!5.32e-08!41;UBERON:0002240!9.09e-08!3;UBERON:0003080!9.76e-08!42;UBERON:0002791!1.23e-07!33;UBERON:0001801!1.28e-07!14;UBERON:0001893!2.44e-07!34;UBERON:0002203!9.55e-07!6;UBERON:0001768!9.55e-07!6|ontology_enrichment_uberon_v019=UBERON:0002331;8.74e-12;10!UBERON:0000178;4.88e-08;15!UBERON:0000179;4.88e-08;15!UBERON:0000463;4.88e-08;15!UBERON:0001905;1.93e-07;2!UBERON:0002757;1.93e-07;2!UBERON:0010134;1.93e-07;2!UBERON:0005408;1.93e-07;2!UBERON:0001899;1.93e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.41e-12,10;UBERON:0000358,9.41e-12,10;UBERON:0000307,9.41e-12,10;UBERON:0000091,9.41e-12,10;UBERON:0000087,9.41e-12,10;UBERON:0007010,9.41e-12,10;UBERON:0007806,9.41e-12,10;UBERON:0008780,9.41e-12,10;UBERON:0005728,9.41e-12,10;UBERON:0000178,5.13e-08,15;UBERON:0000179,5.13e-08,15;UBERON:0000463,5.13e-08,15;UBERON:0001905,2.12e-07,2;UBERON:0002757,2.12e-07,2;UBERON:0010134,2.12e-07,2;UBERON:0005408,2.12e-07,2;UBERON:0001899,2.12e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0,0.313454721478088,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60709189178915,0.443458794925128,0.43917392846563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.231860809950154,0.821860859650752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0.502548796003046,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.38524393686274,0,0,0,0,0,0,0,0.568272293612826,0,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0.885741385813839,0,0,0.663475559587348,0.295547618953547,0,0,0,0,0,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0.451191321234361,0,0,2.46679852541441,0,0,0,0,0,0,0,0,3.26173241548684,1.48276726735803,1.04421949505455,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.829505531177977,0,0,0,0,0,0,0,0,0,0,2.92376255201748,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0.288180834308212,2.40526851948423,0.171594997861965,0.432164393964449,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |||
|TSSclassifier=S | |||
|UniProt=E9PKM0 | |||
|association_with_transcript=0bp_to_ENST00000524853_5end | |||
|description=CAGE_peak_15_at_PAX6_5end | |||
|id=chr11:31833719..31833735,- | |||
|ontology_enrichment_celltype=CL:0000064!5.20e-08!3;CL:0005012!5.20e-08!3;CL:0000067!5.20e-08!3;CL:0002304!5.20e-08!3;CL:0002319!5.29e-08!25;CL:0000133!9.49e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.36e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:6193;5.85e-14;1!DOID:3350;1.27e-07;2!DOID:154;1.93e-07;2!DOID:4236;1.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.53e-14,1;DOID:3350,1.12e-07,2;DOID:154,1.99e-07,2;DOID:4236,1.99e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.11e-21!94;UBERON:0001016!2.11e-21!94;UBERON:0002346!1.08e-20!90;UBERON:0003075!1.21e-20!86;UBERON:0007284!1.21e-20!86;UBERON:0005743!9.50e-19!86;UBERON:0007625!2.00e-16!11;UBERON:0001017!6.62e-16!82;UBERON:0003056!8.99e-16!61;UBERON:0000924!9.58e-16!173;UBERON:0006601!9.58e-16!173;UBERON:0001049!1.46e-15!57;UBERON:0005068!1.46e-15!57;UBERON:0006241!1.46e-15!57;UBERON:0007135!1.46e-15!57;UBERON:0004121!1.82e-15!169;UBERON:0000970!4.16e-12!20;UBERON:0002104!2.09e-11!21;UBERON:0003076!5.00e-11!15;UBERON:0003057!5.00e-11!15;UBERON:0002616!1.15e-10!59;UBERON:0000033!1.22e-10!123;UBERON:0000019!1.60e-10!19;UBERON:0000047!1.60e-10!19;UBERON:0004088!1.60e-10!19;UBERON:0003072!1.60e-10!19;UBERON:0003071!1.60e-10!19;UBERON:0004128!1.60e-10!19;UBERON:0000955!2.46e-10!69;UBERON:0006238!2.46e-10!69;UBERON:0000020!3.43e-10!23;UBERON:0000488!3.54e-10!4;UBERON:0000153!8.85e-10!129;UBERON:0007811!8.85e-10!129;UBERON:0001032!1.16e-09!24;UBERON:0004456!1.16e-09!24;UBERON:0001456!2.61e-09!21;UBERON:0001778!5.20e-08!3;UBERON:0001775!5.20e-08!3;UBERON:0002780!5.32e-08!41;UBERON:0001890!5.32e-08!41;UBERON:0006240!5.32e-08!41;UBERON:0002240!9.09e-08!3;UBERON:0003080!9.76e-08!42;UBERON:0002791!1.23e-07!33;UBERON:0001801!1.28e-07!14;UBERON:0001893!2.44e-07!34;UBERON:0002203!9.55e-07!6;UBERON:0001768!9.55e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.74e-12;10!UBERON:0000178;4.88e-08;15!UBERON:0000179;4.88e-08;15!UBERON:0000463;4.88e-08;15!UBERON:0001905;1.93e-07;2!UBERON:0002757;1.93e-07;2!UBERON:0010134;1.93e-07;2!UBERON:0005408;1.93e-07;2!UBERON:0001899;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.41e-12,10;UBERON:0000358,9.41e-12,10;UBERON:0000307,9.41e-12,10;UBERON:0000091,9.41e-12,10;UBERON:0000087,9.41e-12,10;UBERON:0007010,9.41e-12,10;UBERON:0007806,9.41e-12,10;UBERON:0008780,9.41e-12,10;UBERON:0005728,9.41e-12,10;UBERON:0000178,5.13e-08,15;UBERON:0000179,5.13e-08,15;UBERON:0000463,5.13e-08,15;UBERON:0001905,2.12e-07,2;UBERON:0002757,2.12e-07,2;UBERON:0010134,2.12e-07,2;UBERON:0005408,2.12e-07,2;UBERON:0001899,2.12e-07,2 | |||
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|short_description=p15@PAX6 | |||
}} |
Revision as of 17:27, 10 September 2013
Short description: | p15@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_PAX6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524853_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | E9PKM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.41e-12 | 10 |
blastocyst | 9.41e-12 | 10 |
blastula | 9.41e-12 | 10 |
bilaminar disc | 9.41e-12 | 10 |
inner cell mass | 9.41e-12 | 10 |
cleaving embryo | 9.41e-12 | 10 |
connecting stalk | 9.41e-12 | 10 |
inner cell mass derived epiblast | 9.41e-12 | 10 |
extraembryonic mesoderm | 9.41e-12 | 10 |
blood | 5.13e-08 | 15 |
haemolymphatic fluid | 5.13e-08 | 15 |
organism substance | 5.13e-08 | 15 |
pineal body | 2.12e-07 | 2 |
regional part of epithalamus | 2.12e-07 | 2 |
secretory circumventricular organ | 2.12e-07 | 2 |
circumventricular organ | 2.12e-07 | 2 |
epithalamus | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.53e-14 | 1 |
mesenchymal cell neoplasm | 1.12e-07 | 2 |
mixed cell type cancer | 1.99e-07 | 2 |
carcinosarcoma | 1.99e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.