FFCP PHASE1:Hg19::chr11:313503..313523,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8519|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5412|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000528780_5end|description=CAGE_peak_8_at_IFITM1_5end|id=chr11:313503..313523,+|ontology_enrichment_celltype=CL:0002368!1.37e-10!13;CL:0000223!3.00e-09!59;CL:0002076!2.81e-08!43|ontology_enrichment_celltype_v019=CL:0002368;1.41e-16;13!CL:0002159;3.70e-15;14!CL:0002202;2.30e-11;9!CL:0002632;2.30e-11;9!CL:0000307;1.54e-09;3!CL:0000240;1.65e-09;6!CL:0000311;1.65e-09;6!CL:0000079;1.65e-09;6!CL:0000237;1.65e-09;6!CL:0000346;3.24e-09;3!CL:1000428;3.24e-09;3!CL:0002328;3.89e-09;3!CL:0002076;5.52e-09;42!CL:0002166;6.73e-09;3!CL:0002336;2.74e-07;1!CL:0002261;2.74e-07;1!CL:0002170;2.74e-07;1!CL:0002077;4.48e-07;34|ontology_enrichment_celltype_v019_2=CL:0002368,1.09e-16,13;CL:0000223,3.31e-15,58;CL:0002159,4.60e-15,14;CL:0002202,1.94e-11,9;CL:0002632,1.94e-11,9;CL:0002076,1.98e-10,42;CL:0000068,1.60e-09,3;CL:0000069,1.60e-09,3;CL:0000307,1.60e-09,3;CL:0000377,1.60e-09,3;CL:0000346,2.33e-09,3;CL:1000428,2.33e-09,3;CL:0000240,2.46e-09,6;CL:0000311,2.46e-09,6;CL:0000079,2.46e-09,6;CL:0000237,2.46e-09,6;CL:0000036,2.46e-09,6;CL:0000357,2.46e-09,6;CL:0000114,2.46e-09,6;CL:0002328,2.87e-09,3;CL:0002166,7.60e-09,3;CL:0002321,4.38e-08,250;CL:0000066,4.85e-08,253;CL:0002077,7.34e-08,34;CL:0002336,3.62e-07,1;CL:0002261,3.62e-07,1;CL:0002170,3.62e-07,1|ontology_enrichment_development_v019=CL:0000377;1.54e-09;3!CL:0000357;1.65e-09;6!CL:0000114;1.65e-09;6!CL:0000223;5.11e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;7.99e-08;1!DOID:0070004;7.99e-08;1|ontology_enrichment_disease_v019_2=DOID:4960,8.00e-08,1;DOID:0070004,8.00e-08,1|ontology_enrichment_uberon=UBERON:0001004!2.18e-10!72;UBERON:0001737!5.60e-10!9;UBERON:0000065!3.25e-09!53;UBERON:0001041!5.76e-09!98;UBERON:0004119!2.60e-08!169;UBERON:0000925!2.60e-08!169;UBERON:0006595!2.60e-08!169;UBERON:0001557!4.95e-08!19;UBERON:0001007!2.58e-07!155;UBERON:0001555!2.58e-07!155;UBERON:0007026!2.58e-07!155;UBERON:0000072!2.93e-07!46|ontology_enrichment_uberon_v019=UBERON:0001003;4.96e-10;15!UBERON:0007376;4.96e-10;15!UBERON:0000412;3.24e-09;3!UBERON:0001992;3.24e-09;3!UBERON:0004815;3.89e-09;3!UBERON:0002031;3.89e-09;3!UBERON:0000997;1.17e-07;1!UBERON:0005056;1.17e-07;1!UBERON:0004176;1.17e-07;1!UBERON:0001708;7.05e-07;4!UBERON:0008895;7.05e-07;4!UBERON:0007196;7.53e-07;15!UBERON:0001558;7.53e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,4.78e-10,15;UBERON:0007376,4.78e-10,15;UBERON:0007383,4.78e-10,15;UBERON:0000412,2.33e-09,3;UBERON:0001992,2.33e-09,3;UBERON:0004815,2.87e-09,3;UBERON:0002031,2.87e-09,3;UBERON:0000997,1.03e-07,1;UBERON:0005056,1.03e-07,1;UBERON:0007196,6.82e-07,15;UBERON:0001558,6.82e-07,15;UBERON:0001708,7.72e-07,4;UBERON:0008895,7.72e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687720651731561,0.246301768349837,0.708397031823113,0,0,0,0.919421224478927,2.409647350226,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0.289803085735052,0.296573126324121,0.267540828089713,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,3.27865759463288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0.545492241181669,1.43402297694502,0,0,0,0.10366105501537,0.252320850875628,0.36497735907583,3.12899064659632,1.92972281457866,0,0,0,0.591534000199219,0.337169380156203,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,1.96565443335525,1.18157981336281,0,0,0,0.219500570817251,1.1240175325762,1.10581869652794,1.11106134190236,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00789276919316,1.84307626415102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.431255149719035,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,2.87132768998086,0.650060246036521,0,0,0,0,0,0,0,0,0,1.15699440752685,0.576570202095319,1.53135254993501,0.809262246844399,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.731140468893853,1.05650146756755,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8519 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5412 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000528780_5end | |||
|description=CAGE_peak_8_at_IFITM1_5end | |||
|id=chr11:313503..313523,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.37e-10!13;CL:0000223!3.00e-09!59;CL:0002076!2.81e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.41e-16;13!CL:0002159;3.70e-15;14!CL:0002202;2.30e-11;9!CL:0002632;2.30e-11;9!CL:0000307;1.54e-09;3!CL:0000240;1.65e-09;6!CL:0000311;1.65e-09;6!CL:0000079;1.65e-09;6!CL:0000237;1.65e-09;6!CL:0000346;3.24e-09;3!CL:1000428;3.24e-09;3!CL:0002328;3.89e-09;3!CL:0002076;5.52e-09;42!CL:0002166;6.73e-09;3!CL:0002336;2.74e-07;1!CL:0002261;2.74e-07;1!CL:0002170;2.74e-07;1!CL:0002077;4.48e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.09e-16,13;CL:0000223,3.31e-15,58;CL:0002159,4.60e-15,14;CL:0002202,1.94e-11,9;CL:0002632,1.94e-11,9;CL:0002076,1.98e-10,42;CL:0000068,1.60e-09,3;CL:0000069,1.60e-09,3;CL:0000307,1.60e-09,3;CL:0000377,1.60e-09,3;CL:0000346,2.33e-09,3;CL:1000428,2.33e-09,3;CL:0000240,2.46e-09,6;CL:0000311,2.46e-09,6;CL:0000079,2.46e-09,6;CL:0000237,2.46e-09,6;CL:0000036,2.46e-09,6;CL:0000357,2.46e-09,6;CL:0000114,2.46e-09,6;CL:0002328,2.87e-09,3;CL:0002166,7.60e-09,3;CL:0002321,4.38e-08,250;CL:0000066,4.85e-08,253;CL:0002077,7.34e-08,34;CL:0002336,3.62e-07,1;CL:0002261,3.62e-07,1;CL:0002170,3.62e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;1.54e-09;3!CL:0000357;1.65e-09;6!CL:0000114;1.65e-09;6!CL:0000223;5.11e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;7.99e-08;1!DOID:0070004;7.99e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,8.00e-08,1;DOID:0070004,8.00e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.18e-10!72;UBERON:0001737!5.60e-10!9;UBERON:0000065!3.25e-09!53;UBERON:0001041!5.76e-09!98;UBERON:0004119!2.60e-08!169;UBERON:0000925!2.60e-08!169;UBERON:0006595!2.60e-08!169;UBERON:0001557!4.95e-08!19;UBERON:0001007!2.58e-07!155;UBERON:0001555!2.58e-07!155;UBERON:0007026!2.58e-07!155;UBERON:0000072!2.93e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.96e-10;15!UBERON:0007376;4.96e-10;15!UBERON:0000412;3.24e-09;3!UBERON:0001992;3.24e-09;3!UBERON:0004815;3.89e-09;3!UBERON:0002031;3.89e-09;3!UBERON:0000997;1.17e-07;1!UBERON:0005056;1.17e-07;1!UBERON:0004176;1.17e-07;1!UBERON:0001708;7.05e-07;4!UBERON:0008895;7.05e-07;4!UBERON:0007196;7.53e-07;15!UBERON:0001558;7.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,4.78e-10,15;UBERON:0007376,4.78e-10,15;UBERON:0007383,4.78e-10,15;UBERON:0000412,2.33e-09,3;UBERON:0001992,2.33e-09,3;UBERON:0004815,2.87e-09,3;UBERON:0002031,2.87e-09,3;UBERON:0000997,1.03e-07,1;UBERON:0005056,1.03e-07,1;UBERON:0007196,6.82e-07,15;UBERON:0001558,6.82e-07,15;UBERON:0001708,7.72e-07,4;UBERON:0008895,7.72e-07,4 | |||
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|short_description=p8@IFITM1 | |||
}} |
Revision as of 17:25, 10 September 2013
Short description: | p8@IFITM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_IFITM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528780_5end |
EntrezGene: | IFITM1 |
HGNC: | 5412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.09e-16 | 13 |
endodermal cell | 3.31e-15 | 58 |
general ecto-epithelial cell | 4.60e-15 | 14 |
epithelial cell of tracheobronchial tree | 1.94e-11 | 9 |
epithelial cell of lower respiratory tract | 1.94e-11 | 9 |
endo-epithelial cell | 1.98e-10 | 42 |
duct epithelial cell | 1.60e-09 | 3 |
branched duct epithelial cell | 1.60e-09 | 3 |
tracheal epithelial cell | 1.60e-09 | 3 |
tracheoblast | 1.60e-09 | 3 |
hair follicle dermal papilla cell | 2.33e-09 | 3 |
stem cell of epidermis | 2.33e-09 | 3 |
stratified squamous epithelial cell | 2.46e-09 | 6 |
keratin accumulating cell | 2.46e-09 | 6 |
stratified epithelial cell | 2.46e-09 | 6 |
keratinizing barrier epithelial cell | 2.46e-09 | 6 |
epithelial fate stem cell | 2.46e-09 | 6 |
stratified epithelial stem cell | 2.46e-09 | 6 |
surface ectodermal cell | 2.46e-09 | 6 |
bronchial epithelial cell | 2.87e-09 | 3 |
epithelial cell of Malassez | 7.60e-09 | 3 |
embryonic cell | 4.38e-08 | 250 |
epithelial cell | 4.85e-08 | 253 |
ecto-epithelial cell | 7.34e-08 | 34 |
buccal mucosa cell | 3.62e-07 | 1 |
endothelial cell of viscerocranial mucosa | 3.62e-07 | 1 |
keratinized cell of the oral mucosa | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 4.78e-10 | 15 |
outer epithelium | 4.78e-10 | 15 |
enveloping layer of ectoderm | 4.78e-10 | 15 |
dermal papilla | 2.33e-09 | 3 |
papillary layer of dermis | 2.33e-09 | 3 |
lower respiratory tract epithelium | 2.87e-09 | 3 |
epithelium of bronchus | 2.87e-09 | 3 |
mammalian vulva | 1.03e-07 | 1 |
external female genitalia | 1.03e-07 | 1 |
tracheobronchial tree | 6.82e-07 | 15 |
lower respiratory tract | 6.82e-07 | 15 |
jaw skeleton | 7.72e-07 | 4 |
splanchnocranium | 7.72e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 8.00e-08 | 1 |
myeloma | 8.00e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.