FFCP PHASE1:Hg19::chr11:1944054..1944095,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7140|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11950|TSSclassifier=W|UniProt=|association_with_transcript=0bp_to_uc001lus.1,uc001lut.1_5end|coexpression_cluster_id=C31|description=CAGE_peak_5_at_TNNT3_5end|id=chr11:1944054..1944095,+|ontology_enrichment_celltype=CL:0000136!3.37e-14!15|ontology_enrichment_celltype_v019=CL:0000136;1.58e-15;13!CL:0002580;4.05e-11;3!CL:0002615;1.17e-10;3!CL:0002334;4.45e-10;12|ontology_enrichment_celltype_v019_2=CL:0000136,2.46e-13,15;CL:0002580,2.91e-11,3;CL:0002615,1.32e-10,3;CL:0002334,3.56e-10,12|ontology_enrichment_development_v019=UBERON:0006603;2.06e-08;65!UBERON:0006965;6.32e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.45e-17!115;UBERON:0003688!3.49e-10!6;UBERON:0002358!3.49e-10!6;UBERON:0003684!3.49e-10!6;UBERON:0001178!3.49e-10!6;UBERON:0001443!1.81e-07!11;UBERON:0000974!3.40e-07!10|ontology_enrichment_uberon_v019=UBERON:0003688;5.07e-14;6!UBERON:0002358;5.07e-14;6!UBERON:0003684;5.07e-14;6!UBERON:0001178;5.07e-14;6!UBERON:0001443;3.85e-11;11!UBERON:0004457;3.00e-09;9!UBERON:0000042;3.00e-09;9!UBERON:0005090;8.10e-09;2!UBERON:0001630;8.10e-09;2!UBERON:0005406;9.93e-09;2!UBERON:0000310;1.46e-08;10!UBERON:0000341;2.61e-08;2!UBERON:0003127;3.35e-08;2!UBERON:0003135;9.88e-08;11!UBERON:0000922;1.64e-07;49|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.94e-14,6;UBERON:0002358,4.94e-14,6;UBERON:0003684,4.94e-14,6;UBERON:0001178,4.94e-14,6;UBERON:0007023,2.06e-11,114;UBERON:0001443,3.21e-11,11;UBERON:0005090,7.96e-09,2;UBERON:0001630,7.96e-09,2;UBERON:0005406,9.94e-09,2;UBERON:0000310,1.24e-08,10;UBERON:0000341,2.47e-08,2;UBERON:0003127,3.18e-08,2;UBERON:0003135,1.13e-07,11;UBERON:0004457,7.31e-07,12;UBERON:0000042,7.31e-07,12|phase1_expression=2.72517568905835,0.642301571672949,1.55049844505568,1.0007329835313,4.91657203870017,15.7020934338066,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,4.71404834855676,1.84154367945675,4.77122160536225,2.81906128362542,3.58195074346692,0.160853921143607,16.325987308949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,5.43095417445098,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0.614321404198464,0,0,0,0,0.422250816255987,2.39097585901284,0.828851746593443,0,0,0,0,0,0,0,5.81996093257908,0,0,0,0,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,1.46205491157214,0,0,0.0897576444097721,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,5.49927130440263,0,0,0,0,36.9185717757443,0,0,0.19566461893209,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.775912131907355,0,4.06765333404958,0,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.916641696046735,0,0,0,0.446342914883745,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.681909645754975,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,2.51526888159466,0,0,0,0,0,2.72008901684737,2.7575888342497,1.83807346058077,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.917142992608395,0.115525666150338,0,0,0,0.82731361184183,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,10.9166459245645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56986185701028,0,0,0.913158720509496,0,0,0,0.158013611732727,0,0.521574816907738,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,16.8331497668853,8.21302454849976,30.1551752147932,6.31424290976881,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,3.67722482630858,0,0,0,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0.286679166302903,0,0,0,2.645134202577,0.371995018166751,0.462175628631418,4.32626562123789,0,0,0,0,0,0.18378979906969,0,3.25848402338429,2.67964130156179,0,0,3.62497769231668,7.85612623830343,0.452122368852043,1.24149428591716,0,0.190941474834495,3.03175783437329,15.6756058485812,21.5606979683727,0.471464371102113,2.7254438049217,10.3124710529264,0,0,0,0,0,1.4668973301944,0,3.99454064511308,3.22038069745642,0|short_description=p5@TNNT3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7140 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11950 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001lus.1,uc001lut.1_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_5_at_TNNT3_5end | |||
|id=chr11:1944054..1944095,+ | |||
|ontology_enrichment_celltype=CL:0000136!3.37e-14!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.58e-15;13!CL:0002580;4.05e-11;3!CL:0002615;1.17e-10;3!CL:0002334;4.45e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.46e-13,15;CL:0002580,2.91e-11,3;CL:0002615,1.32e-10,3;CL:0002334,3.56e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.06e-08;65!UBERON:0006965;6.32e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.45e-17!115;UBERON:0003688!3.49e-10!6;UBERON:0002358!3.49e-10!6;UBERON:0003684!3.49e-10!6;UBERON:0001178!3.49e-10!6;UBERON:0001443!1.81e-07!11;UBERON:0000974!3.40e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.07e-14;6!UBERON:0002358;5.07e-14;6!UBERON:0003684;5.07e-14;6!UBERON:0001178;5.07e-14;6!UBERON:0001443;3.85e-11;11!UBERON:0004457;3.00e-09;9!UBERON:0000042;3.00e-09;9!UBERON:0005090;8.10e-09;2!UBERON:0001630;8.10e-09;2!UBERON:0005406;9.93e-09;2!UBERON:0000310;1.46e-08;10!UBERON:0000341;2.61e-08;2!UBERON:0003127;3.35e-08;2!UBERON:0003135;9.88e-08;11!UBERON:0000922;1.64e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.94e-14,6;UBERON:0002358,4.94e-14,6;UBERON:0003684,4.94e-14,6;UBERON:0001178,4.94e-14,6;UBERON:0007023,2.06e-11,114;UBERON:0001443,3.21e-11,11;UBERON:0005090,7.96e-09,2;UBERON:0001630,7.96e-09,2;UBERON:0005406,9.94e-09,2;UBERON:0000310,1.24e-08,10;UBERON:0000341,2.47e-08,2;UBERON:0003127,3.18e-08,2;UBERON:0003135,1.13e-07,11;UBERON:0004457,7.31e-07,12;UBERON:0000042,7.31e-07,12 | |||
|phase1_expression=2.72517568905835,0.642301571672949,1.55049844505568,1.0007329835313,4.91657203870017,15.7020934338066,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,4.71404834855676,1.84154367945675,4.77122160536225,2.81906128362542,3.58195074346692,0.160853921143607,16.325987308949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,5.43095417445098,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0.614321404198464,0,0,0,0,0.422250816255987,2.39097585901284,0.828851746593443,0,0,0,0,0,0,0,5.81996093257908,0,0,0,0,1.99613798001194,0,0,4.34999745260876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,1.46205491157214,0,0,0.0897576444097721,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0.884575645033392,5.49927130440263,0,0,0,0,36.9185717757443,0,0,0.19566461893209,0,1.18375320854817,1.20990716048664,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,0.775912131907355,0,4.06765333404958,0,0,0,0,0.0801588202515337,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,0.916641696046735,0,0,0,0.446342914883745,1.74677028465488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,0.681909645754975,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.427149650270779,2.51526888159466,0,0,0,0,0,2.72008901684737,2.7575888342497,1.83807346058077,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0.917142992608395,0.115525666150338,0,0,0,0.82731361184183,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,10.9166459245645,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56986185701028,0,0,0.913158720509496,0,0,0,0.158013611732727,0,0.521574816907738,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,16.8331497668853,8.21302454849976,30.1551752147932,6.31424290976881,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,3.67722482630858,0,0,0,1.2679671827502,0,0,0,0,0.178553938605658,0,0,0,1.37618785021362,0.286679166302903,0,0,0,2.645134202577,0.371995018166751,0.462175628631418,4.32626562123789,0,0,0,0,0,0.18378979906969,0,3.25848402338429,2.67964130156179,0,0,3.62497769231668,7.85612623830343,0.452122368852043,1.24149428591716,0,0.190941474834495,3.03175783437329,15.6756058485812,21.5606979683727,0.471464371102113,2.7254438049217,10.3124710529264,0,0,0,0,0,1.4668973301944,0,3.99454064511308,3.22038069745642,0 | |||
|short_description=p5@TNNT3 | |||
}} |
Revision as of 17:05, 10 September 2013
Short description: | p5@TNNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TNNT3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_uc001lus.1, uc001lut.1_5end |
EntrezGene: | TNNT3 |
HGNC: | 11950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.46e-13 | 15 |
preadipocyte of the breast | 2.91e-11 | 3 |
adipocyte of omentum tissue | 1.32e-10 | 3 |
preadipocyte | 3.56e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.94e-14 | 6 |
peritoneum | 4.94e-14 | 6 |
abdominal cavity | 4.94e-14 | 6 |
visceral peritoneum | 4.94e-14 | 6 |
adult organism | 2.06e-11 | 114 |
chest | 3.21e-11 | 11 |
muscle structure | 7.96e-09 | 2 |
muscle organ | 7.96e-09 | 2 |
perirenal fat | 9.94e-09 | 2 |
breast | 1.24e-08 | 10 |
throat | 2.47e-08 | 2 |
open tracheal system trachea | 3.18e-08 | 2 |
male reproductive organ | 1.13e-07 | 11 |
cavity lining | 7.31e-07 | 12 |
serous membrane | 7.31e-07 | 12 |
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