FFCP PHASE1:Hg19::chr11:18034671..18034683,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26297|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17499|TSSclassifier=S|UniProt=Q9UGK8|association_with_transcript=25bp_to_ENST00000265965_5end|description=CAGE_peak_3_at_SERGEF_5end|id=chr11:18034671..18034683,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!2.00e-20!86;UBERON:0000073!5.55e-20!94;UBERON:0001016!5.55e-20!94;UBERON:0001017!9.21e-20!82;UBERON:0002616!2.61e-16!59;UBERON:0000955!4.26e-16!69;UBERON:0006238!4.26e-16!69;UBERON:0001049!4.48e-16!57;UBERON:0005068!4.48e-16!57;UBERON:0006241!4.48e-16!57;UBERON:0007135!4.48e-16!57;UBERON:0002346!9.84e-16!90;UBERON:0003075!1.11e-15!86;UBERON:0007284!1.11e-15!86;UBERON:0007023!6.48e-15!115;UBERON:0002780!4.54e-12!41;UBERON:0001890!4.54e-12!41;UBERON:0006240!4.54e-12!41;UBERON:0000924!5.81e-12!173;UBERON:0006601!5.81e-12!173;UBERON:0004121!9.59e-12!169;UBERON:0003080!2.33e-11!42;UBERON:0000033!1.49e-10!123;UBERON:0001893!1.51e-10!34;UBERON:0003056!2.99e-10!61;UBERON:0000153!3.66e-10!129;UBERON:0007811!3.66e-10!129;UBERON:0002791!5.10e-10!33;UBERON:0002020!7.22e-10!34;UBERON:0003528!7.22e-10!34;UBERON:0001869!1.45e-09!32;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000477!1.38e-07!286;UBERON:0002619!4.85e-07!22;UBERON:0000025!7.24e-07!194|ontology_enrichment_uberon_v019=UBERON:0001016;1.08e-09;83!UBERON:0001893;5.03e-09;34!UBERON:0002780;9.56e-09;41!UBERON:0001890;9.56e-09;41!UBERON:0000073;1.66e-08;53!UBERON:0002616;1.66e-08;53!UBERON:0001869;2.68e-08;32!UBERON:0002791;3.03e-07;32!UBERON:0003528;3.22e-07;34!UBERON:0002020;3.22e-07;34!UBERON:0000349;3.55e-07;5!UBERON:0001017;4.70e-07;75!UBERON:0002619;5.02e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.19e-22,81;UBERON:0001016,4.09e-19,89;UBERON:0000955,3.02e-16,68;UBERON:0006238,3.02e-16,68;UBERON:0001049,8.77e-15,56;UBERON:0005068,8.77e-15,56;UBERON:0006241,8.77e-15,56;UBERON:0007135,8.77e-15,56;UBERON:0003075,1.07e-14,82;UBERON:0007284,1.07e-14,82;UBERON:0002346,8.74e-14,86;UBERON:0000073,4.42e-12,53;UBERON:0002616,4.42e-12,53;UBERON:0004121,6.15e-12,171;UBERON:0000924,6.15e-12,171;UBERON:0006601,6.15e-12,171;UBERON:0010371,9.29e-12,104;UBERON:0001893,1.16e-10,34;UBERON:0002780,3.42e-10,41;UBERON:0001890,3.42e-10,41;UBERON:0003080,3.42e-10,41;UBERON:0006240,3.42e-10,41;UBERON:0001869,2.13e-09,32;UBERON:0003056,1.26e-08,61;UBERON:0007023,3.22e-08,114;UBERON:0002791,1.14e-07,32;UBERON:0000349,2.40e-07,5;UBERON:0010314,2.49e-07,132;UBERON:0002619,3.31e-07,22;UBERON:0003528,3.87e-07,34;UBERON:0002020,3.87e-07,34;UBERON:0011216,7.12e-07,223|phase1_expression=0,0.428201047781966,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0.626909442956176,0.286235987131057,0.684372125364421,0.502170558379211,0.382067028739756,0,0.472264687882075,0,0,0.309632246632152,0,0.30120591877825,0.369754010166788,0.154934401160603,0,0.587200878669695,0,0.601633342410425,0.217010870715852,0,0.32389366601898,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0,0.32145117339416,1.14005097496499,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,1.77901850772711,0.426730222566507,0.800791974072025,0,0,0,0,0,0.382273228125229,1.32171328579026,1.12101712596307,0.526768169550154,0.196709770113833,0,0,0.167186495390678,0.651844533267181,0.946895611469467,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0,0,0,0.296573126324121,0.535081656179426,0,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0,0,0.602300476311091,0.127986611154418,1.24930726552346,0.710331756132051,0,0.403213486449465,0.267440195783507,0.724122019413995,0,0,0.12786256184353,0,0.50133791063589,0.579386075843295,0,0.973269740605272,0.661743720148475,0.886917589850256,0.614843499851882,0.589405839739707,0,0.370784442784429,0,0.348259474598534,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,0.56530794192401,0,0.550236083880135,0.835979866147242,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.803697554556718,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0.496971951695318,0,0.264818361626438,0,0.709336764396714,0,0,0,0,0.269421344139376,0.326923806226917,0.605429710579726,1.15235184896,0.234321431833797,0.624320153660641,0,0.298897361103602,0.117434498643765,0,0,0.61246251376468,0.368502951935304,0.413303124703062,1.18800285728205,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17499 | |||
|TSSclassifier=S | |||
|UniProt=Q9UGK8 | |||
|association_with_transcript=25bp_to_ENST00000265965_5end | |||
|description=CAGE_peak_3_at_SERGEF_5end | |||
|id=chr11:18034671..18034683,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.00e-20!86;UBERON:0000073!5.55e-20!94;UBERON:0001016!5.55e-20!94;UBERON:0001017!9.21e-20!82;UBERON:0002616!2.61e-16!59;UBERON:0000955!4.26e-16!69;UBERON:0006238!4.26e-16!69;UBERON:0001049!4.48e-16!57;UBERON:0005068!4.48e-16!57;UBERON:0006241!4.48e-16!57;UBERON:0007135!4.48e-16!57;UBERON:0002346!9.84e-16!90;UBERON:0003075!1.11e-15!86;UBERON:0007284!1.11e-15!86;UBERON:0007023!6.48e-15!115;UBERON:0002780!4.54e-12!41;UBERON:0001890!4.54e-12!41;UBERON:0006240!4.54e-12!41;UBERON:0000924!5.81e-12!173;UBERON:0006601!5.81e-12!173;UBERON:0004121!9.59e-12!169;UBERON:0003080!2.33e-11!42;UBERON:0000033!1.49e-10!123;UBERON:0001893!1.51e-10!34;UBERON:0003056!2.99e-10!61;UBERON:0000153!3.66e-10!129;UBERON:0007811!3.66e-10!129;UBERON:0002791!5.10e-10!33;UBERON:0002020!7.22e-10!34;UBERON:0003528!7.22e-10!34;UBERON:0001869!1.45e-09!32;UBERON:0000956!1.30e-07!25;UBERON:0000203!1.30e-07!25;UBERON:0000477!1.38e-07!286;UBERON:0002619!4.85e-07!22;UBERON:0000025!7.24e-07!194 | |||
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| |||
|short_description=p3@SERGEF | |||
}} |
Revision as of 16:58, 10 September 2013
Short description: | p3@SERGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SERGEF_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000265965_5end |
EntrezGene: | SERGEF |
HGNC: | 17499 |
UniProt: | Q9UGK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.19e-22 | 81 |
nervous system | 4.09e-19 | 89 |
brain | 3.02e-16 | 68 |
future brain | 3.02e-16 | 68 |
neural tube | 8.77e-15 | 56 |
neural rod | 8.77e-15 | 56 |
future spinal cord | 8.77e-15 | 56 |
neural keel | 8.77e-15 | 56 |
neural plate | 1.07e-14 | 82 |
presumptive neural plate | 1.07e-14 | 82 |
neurectoderm | 8.74e-14 | 86 |
regional part of nervous system | 4.42e-12 | 53 |
regional part of brain | 4.42e-12 | 53 |
ectoderm-derived structure | 6.15e-12 | 171 |
ectoderm | 6.15e-12 | 171 |
presumptive ectoderm | 6.15e-12 | 171 |
ecto-epithelium | 9.29e-12 | 104 |
telencephalon | 1.16e-10 | 34 |
regional part of forebrain | 3.42e-10 | 41 |
forebrain | 3.42e-10 | 41 |
anterior neural tube | 3.42e-10 | 41 |
future forebrain | 3.42e-10 | 41 |
cerebral hemisphere | 2.13e-09 | 32 |
pre-chordal neural plate | 1.26e-08 | 61 |
adult organism | 3.22e-08 | 114 |
regional part of telencephalon | 1.14e-07 | 32 |
limbic system | 2.40e-07 | 5 |
structure with developmental contribution from neural crest | 2.49e-07 | 132 |
regional part of cerebral cortex | 3.31e-07 | 22 |
brain grey matter | 3.87e-07 | 34 |
gray matter | 3.87e-07 | 34 |
organ system subdivision | 7.12e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.