FFCP PHASE1:Hg19::chr11:129266300..129266304,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:129266300..129266304,+|id=chr11:129266300..129266304,+|ontology_enrichment_celltype=CL:0000080!1.56e-09!6;CL:0002623!1.79e-08!3;CL:0002178!3.76e-08!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:178!8.98e-07!1;DOID:326!8.98e-07!1;DOID:3978!8.98e-07!1;DOID:3394!8.98e-07!1;DOID:5844!8.98e-07!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001044!1.19e-15!6;UBERON:0003293!1.19e-15!6;UBERON:0003294!1.19e-15!6;UBERON:0010047!1.19e-15!6;UBERON:0000167!1.19e-15!6;UBERON:0003408!1.96e-09!10;UBERON:0000166!2.36e-09!21;UBERON:0000078!7.93e-08!18;UBERON:0007029!2.50e-07!1;UBERON:0001736!3.57e-07!1;UBERON:0006298!3.57e-07!1;UBERON:0000165!7.31e-07!28;UBERON:0000930!7.31e-07!28|ontology_enrichment_uberon_v019=UBERON:0007029;2.21e-40;1!UBERON:0002331;7.21e-17;10!UBERON:0000922;3.50e-12;49!UBERON:0000178;1.31e-11;15!UBERON:0000179;1.31e-11;15!UBERON:0000463;1.31e-11;15!UBERON:0000014;3.42e-11;4!UBERON:0001044;5.73e-08;6!UBERON:0003293;5.73e-08;6!UBERON:0003294;5.73e-08;6!UBERON:0010047;5.73e-08;6!UBERON:0003408;5.73e-08;6!UBERON:0000167;5.73e-08;6!UBERON:0000478;1.25e-07;24!UBERON:0001871;6.04e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.21e-40,1;UBERON:0002331,6.39e-17,10;UBERON:0000358,6.39e-17,10;UBERON:0000307,6.39e-17,10;UBERON:0000091,6.39e-17,10;UBERON:0000087,6.39e-17,10;UBERON:0007010,6.39e-17,10;UBERON:0007806,6.39e-17,10;UBERON:0008780,6.39e-17,10;UBERON:0005728,6.39e-17,10;UBERON:0000178,1.21e-11,15;UBERON:0000179,1.21e-11,15;UBERON:0000463,1.21e-11,15;UBERON:0000014,3.42e-11,4;UBERON:0001044,5.92e-08,6;UBERON:0003293,5.92e-08,6;UBERON:0003294,5.92e-08,6;UBERON:0010047,5.92e-08,6;UBERON:0000167,5.92e-08,6;UBERON:0000478,1.19e-07,24;UBERON:0001871,6.39e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.593042257361244,1.48276726735803,2.40170483862547,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,2.15113679410139,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p@chr11:129266300..129266304,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:129266300..129266304,+ | |||
|id=chr11:129266300..129266304,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.56e-09!6;CL:0002623!1.79e-08!3;CL:0002178!3.76e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:178!8.98e-07!1;DOID:326!8.98e-07!1;DOID:3978!8.98e-07!1;DOID:3394!8.98e-07!1;DOID:5844!8.98e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!1.19e-15!6;UBERON:0003293!1.19e-15!6;UBERON:0003294!1.19e-15!6;UBERON:0010047!1.19e-15!6;UBERON:0000167!1.19e-15!6;UBERON:0003408!1.96e-09!10;UBERON:0000166!2.36e-09!21;UBERON:0000078!7.93e-08!18;UBERON:0007029!2.50e-07!1;UBERON:0001736!3.57e-07!1;UBERON:0006298!3.57e-07!1;UBERON:0000165!7.31e-07!28;UBERON:0000930!7.31e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.21e-40;1!UBERON:0002331;7.21e-17;10!UBERON:0000922;3.50e-12;49!UBERON:0000178;1.31e-11;15!UBERON:0000179;1.31e-11;15!UBERON:0000463;1.31e-11;15!UBERON:0000014;3.42e-11;4!UBERON:0001044;5.73e-08;6!UBERON:0003293;5.73e-08;6!UBERON:0003294;5.73e-08;6!UBERON:0010047;5.73e-08;6!UBERON:0003408;5.73e-08;6!UBERON:0000167;5.73e-08;6!UBERON:0000478;1.25e-07;24!UBERON:0001871;6.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.21e-40,1;UBERON:0002331,6.39e-17,10;UBERON:0000358,6.39e-17,10;UBERON:0000307,6.39e-17,10;UBERON:0000091,6.39e-17,10;UBERON:0000087,6.39e-17,10;UBERON:0007010,6.39e-17,10;UBERON:0007806,6.39e-17,10;UBERON:0008780,6.39e-17,10;UBERON:0005728,6.39e-17,10;UBERON:0000178,1.21e-11,15;UBERON:0000179,1.21e-11,15;UBERON:0000463,1.21e-11,15;UBERON:0000014,3.42e-11,4;UBERON:0001044,5.92e-08,6;UBERON:0003293,5.92e-08,6;UBERON:0003294,5.92e-08,6;UBERON:0010047,5.92e-08,6;UBERON:0000167,5.92e-08,6;UBERON:0000478,1.19e-07,24;UBERON:0001871,6.39e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0.593042257361244,1.48276726735803,2.40170483862547,0,0,0,0,0,0.242780379534093,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0.3414369541879,0,2.15113679410139,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,1.45713297917742,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr11:129266300..129266304,+ | |||
}} |
Revision as of 16:38, 10 September 2013
Short description: | p@chr11:129266300..129266304, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:129266300..129266304, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
surface | 2.21e-40 | 1 |
umbilical cord | 6.39e-17 | 10 |
blastocyst | 6.39e-17 | 10 |
blastula | 6.39e-17 | 10 |
bilaminar disc | 6.39e-17 | 10 |
inner cell mass | 6.39e-17 | 10 |
cleaving embryo | 6.39e-17 | 10 |
connecting stalk | 6.39e-17 | 10 |
inner cell mass derived epiblast | 6.39e-17 | 10 |
extraembryonic mesoderm | 6.39e-17 | 10 |
blood | 1.21e-11 | 15 |
haemolymphatic fluid | 1.21e-11 | 15 |
organism substance | 1.21e-11 | 15 |
zone of skin | 3.42e-11 | 4 |
saliva-secreting gland | 5.92e-08 | 6 |
gland of oral region | 5.92e-08 | 6 |
gland of foregut | 5.92e-08 | 6 |
oral gland | 5.92e-08 | 6 |
oral cavity | 5.92e-08 | 6 |
extraembryonic structure | 1.19e-07 | 24 |
temporal lobe | 6.39e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.