FFCP PHASE1:Hg19::chr11:125472775..125472802,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3703|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6172|TSSclassifier=S|UniProt=|association_with_transcript=123bp_to_ENST00000526213_5end|description=CAGE_peak_8_at_STT3A_5end|id=chr11:125472775..125472802,+|ontology_enrichment_celltype=CL:0000055!6.22e-07!180|ontology_enrichment_celltype_v019=CL:0002579;2.05e-07;3|ontology_enrichment_celltype_v019_2=CL:0002579,1.76e-07,3;CL:0000136,3.74e-07,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.07e-07!57|ontology_enrichment_uberon_v019=UBERON:0004457;1.07e-10;9!UBERON:0000042;1.07e-10;9!UBERON:0003688;2.85e-09;6!UBERON:0002358;2.85e-09;6!UBERON:0003684;2.85e-09;6!UBERON:0001178;2.85e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.75e-09,6;UBERON:0002358,2.75e-09,6;UBERON:0003684,2.75e-09,6;UBERON:0001178,2.75e-09,6;UBERON:0004457,1.02e-07,12;UBERON:0000042,1.02e-07,12|phase1_expression=1.2717486548939,1.49870366723688,2.25527046553554,0,2.23480547213644,1.74467704820074,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.873765488520689,0.791300934685361,0.495065411840187,0,0.672325146451775,0.602694528023977,0.730310090387373,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.229240217243854,0.164201178899891,0.393553906568396,0.393364276848904,0,0.309632246632152,0,0,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,1.56740831967947,0.647787332037959,0.515151135268373,0.145398238779565,0.755751887377619,0,0.232429036905685,0.411167888021826,0,0,0.512321413058201,0.236482229888585,0,0,0,0.376484679085209,0,0.224723484445085,0.306083892370903,0.641858054152187,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.285012743741249,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0,0.552700035571697,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0.651083453856419,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,2.53007406669196,0.50133791063589,0.289693037921647,1.5905718941022,1.94653948121054,0,0.221729397462564,0.175669571386252,0.458426764241994,0,0,0,0.348259474598534,0.664789802594326,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0.550236083880135,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.24406205754817,1.47065232138347,0,0.625098097988558,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,1.2663051166458,0.264818361626438,5.16305917347865,1.77334191099179,1.12135520028461,0,0.98667019366864,0.311211035399766,0.67355336034844,0.490385709340376,0.605429710579726,0,0,0.624320153660641,1.1409436430889,0.149448680551801,0.117434498643765,0.485618833104395,0.140450806702248,0.408308342509787,0.245668634623536,0.103325781175765,0,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,0,0.612975591598039,1.35214253015937,0.340296549480063,1.79389635688862,0.213557388818567,0.211931901159562,0.300091096084402,0.721367704669072,1.03056216018252,1.8611685633159,1.0126579934476,1.16924406193438,1.26216887122057,0.184099797284599,0.80823028409406,2.13005755509969,0.302256294682921,0.169560592310488,1.15956511897978,1.09098448236334,0.860413786167011,0.609868530647977,0.265059536642971,0.464775771478074,0.621966330092223,0,0.72995471815166,0,0,1.38134921352481,0,0,0.236613600079688,0.505754070234305,0.241011029883482,0.330881918197182,0,0.237270619111097,0.404493924480493,0.588664395376038,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,1.96781501668982,0.171567810298526,0.98775256867763,0,0,0.185176890317059,0.651616610620649,0,0,0.115930404975077,0.352226082707465,0.866198686566443,0,0.380508304469197,0,0,0.246217006087397,0.702012795417713,0,0,0.335964256397719,0.425325291727159,0.0895585227028483,0,0,0,2.0251139823042,0.829312462163088,0.720599767084807,0.75745460055828,0.444485260045183,1.90994212779139,0,1.71072446022705,0.822619941626588,0.901029173531752,1.14330573052231,0.336393253036082,0.43596006883328,0.1466765716419,1.03417372606222,0,0,1.06375246633948,1.04007436911366,0.257207374262142,0,0,0,0,0.823240336780769,0.65147236858747,0.355391948742546,0,0,0,0.399891964728228,0,0.502257091432126,0,1.4377491329495,0,0,0.144781306667579,0.205476322550383,0.716243852959582,0.112085143993527,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,0.831883446123229,0.535286966391485,1.10391690523754,0.585707074963566,2.40756879782175,2.27407504055985,2.0694614258501,0.664225598535437,0.737476674166813,0.955719759148911,0,0.343143423810856,0,0.21571420081861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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3703 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6172 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=123bp_to_ENST00000526213_5end | |||
|description=CAGE_peak_8_at_STT3A_5end | |||
|id=chr11:125472775..125472802,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.22e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,1.76e-07,3;CL:0000136,3.74e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.07e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.07e-10;9!UBERON:0000042;1.07e-10;9!UBERON:0003688;2.85e-09;6!UBERON:0002358;2.85e-09;6!UBERON:0003684;2.85e-09;6!UBERON:0001178;2.85e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.75e-09,6;UBERON:0002358,2.75e-09,6;UBERON:0003684,2.75e-09,6;UBERON:0001178,2.75e-09,6;UBERON:0004457,1.02e-07,12;UBERON:0000042,1.02e-07,12 | |||
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| |||
|short_description=p8@STT3A | |||
}} |
Revision as of 16:29, 10 September 2013
Short description: | p8@STT3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_STT3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_ENST00000526213_5end |
EntrezGene: | STT3A |
HGNC: | 6172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 1.76e-07 | 3 |
fat cell | 3.74e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.75e-09 | 6 |
peritoneum | 2.75e-09 | 6 |
abdominal cavity | 2.75e-09 | 6 |
visceral peritoneum | 2.75e-09 | 6 |
cavity lining | 1.02e-07 | 12 |
serous membrane | 1.02e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.