FFCP PHASE1:Hg19::chr11:121972361..121972368,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=25bp_to_ENST00000530072,ENST00000531629,ENST00000532890_5end|coexpression_cluster_id=C10|description=CAGE_peak_2_at_ENST00000530072_5end,CAGE_peak_2_at_ENST00000531629_5end,CAGE_peak_2_at_ENST00000532890_5end|id=chr11:121972361..121972368,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000540;2.53e-08;6!CL:0000404;2.53e-08;6!CL:0000135;3.31e-07;3!CL:0000388;3.31e-07;3|ontology_enrichment_celltype_v019_2=CL:0000047,1.68e-10,8;CL:0000540,2.61e-08,6;CL:0000031,2.61e-08,6;CL:0000404,2.61e-08,6;CL:0000135,4.54e-07,3;CL:0000388,4.54e-07,3|ontology_enrichment_development_v019=UBERON:0006601;7.61e-09;82!CL:0000031;2.53e-08;6!UBERON:0006241;1.64e-07;3!UBERON:0003057;1.64e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!3.73e-39!86;UBERON:0001017!1.23e-38!82;UBERON:0001049!4.41e-38!57;UBERON:0005068!4.41e-38!57;UBERON:0006241!4.41e-38!57;UBERON:0007135!4.41e-38!57;UBERON:0000073!1.58e-37!94;UBERON:0001016!1.58e-37!94;UBERON:0003075!4.24e-34!86;UBERON:0007284!4.24e-34!86;UBERON:0007023!9.60e-34!115;UBERON:0002616!2.15e-33!59;UBERON:0002346!1.05e-31!90;UBERON:0000955!5.15e-30!69;UBERON:0006238!5.15e-30!69;UBERON:0002780!2.01e-29!41;UBERON:0001890!2.01e-29!41;UBERON:0006240!2.01e-29!41;UBERON:0003080!1.94e-28!42;UBERON:0002020!6.51e-26!34;UBERON:0003528!6.51e-26!34;UBERON:0001893!1.10e-25!34;UBERON:0002791!1.14e-24!33;UBERON:0001869!2.39e-23!32;UBERON:0003056!2.77e-23!61;UBERON:0004121!1.14e-21!169;UBERON:0000924!1.22e-20!173;UBERON:0006601!1.22e-20!173;UBERON:0000153!1.96e-19!129;UBERON:0007811!1.96e-19!129;UBERON:0000033!2.13e-19!123;UBERON:0000956!7.51e-18!25;UBERON:0000203!7.51e-18!25;UBERON:0002619!1.10e-15!22;UBERON:0001950!1.65e-15!20;UBERON:0000475!2.95e-14!365;UBERON:0003076!1.37e-10!15;UBERON:0003057!1.37e-10!15;UBERON:0002308!1.19e-09!9;UBERON:0002420!1.19e-09!9;UBERON:0000125!1.19e-09!9;UBERON:0007245!1.19e-09!9;UBERON:0010009!1.19e-09!9;UBERON:0010011!1.19e-09!9;UBERON:0000454!1.19e-09!9;UBERON:0000025!8.33e-09!194;UBERON:0000468!1.05e-08!659;UBERON:0001871!2.37e-08!7;UBERON:0002298!2.42e-08!8;UBERON:0000483!5.61e-08!309;UBERON:0000119!1.06e-07!312;UBERON:0000467!2.33e-07!625;UBERON:0004733!2.58e-07!12;UBERON:0002028!2.58e-07!12;UBERON:0007277!2.58e-07!12;UBERON:0000480!2.74e-07!626;UBERON:0000477!2.82e-07!286;UBERON:0009663!2.91e-07!7;UBERON:0004111!3.93e-07!241|ontology_enrichment_uberon_v019=UBERON:0002780;1.56e-31;41!UBERON:0001890;1.56e-31;41!UBERON:0003528;7.96e-29;34!UBERON:0002020;7.96e-29;34!UBERON:0000073;3.62e-26;53!UBERON:0002616;3.62e-26;53!UBERON:0002791;5.22e-26;32!UBERON:0001893;7.32e-25;34!UBERON:0002619;2.66e-23;22!UBERON:0001869;4.51e-22;32!UBERON:0001950;2.78e-21;20!UBERON:0000956;2.33e-20;25!UBERON:0000203;2.33e-20;25!UBERON:0002420;1.58e-18;9!UBERON:0000125;1.58e-18;9!UBERON:0007245;1.58e-18;9!UBERON:0002308;1.58e-18;9!UBERON:0010009;1.58e-18;9!UBERON:0010011;1.58e-18;9!UBERON:0000454;1.58e-18;9!UBERON:0001016;6.73e-16;83!UBERON:0000349;2.77e-15;5!UBERON:0000988;4.34e-15;3!UBERON:0001017;7.91e-14;75!UBERON:0000955;3.43e-13;68!UBERON:0001871;2.06e-11;6!UBERON:0002784;3.52e-11;4!UBERON:0001894;3.73e-11;7!UBERON:0009663;3.73e-11;7!UBERON:0001876;2.13e-10;2!UBERON:0001897;2.13e-10;2!UBERON:0002148;2.13e-10;2!UBERON:0001875;2.13e-10;2!UBERON:0006331;2.13e-10;2!UBERON:0009662;2.13e-10;2!UBERON:0006514;2.13e-10;2!UBERON:0010225;2.13e-10;2!UBERON:0001872;2.27e-09;5!UBERON:0002298;8.89e-08;6!UBERON:0002240;1.64e-07;3!UBERON:0005174;1.64e-07;3!UBERON:0001137;1.64e-07;3!UBERON:0007846;3.31e-07;3!UBERON:0000043;3.31e-07;3!UBERON:0007845;3.31e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.03e-47,56;UBERON:0005068,3.03e-47,56;UBERON:0006241,3.03e-47,56;UBERON:0007135,3.03e-47,56;UBERON:0001017,1.99e-46,81;UBERON:0000073,8.15e-42,53;UBERON:0002616,8.15e-42,53;UBERON:0001016,3.07e-41,89;UBERON:0002780,3.62e-41,41;UBERON:0001890,3.62e-41,41;UBERON:0003080,3.62e-41,41;UBERON:0006240,3.62e-41,41;UBERON:0003528,4.32e-36,34;UBERON:0002020,4.32e-36,34;UBERON:0000955,3.35e-34,68;UBERON:0006238,3.35e-34,68;UBERON:0003075,2.21e-33,82;UBERON:0007284,2.21e-33,82;UBERON:0001893,1.05e-31,34;UBERON:0002346,1.42e-31,86;UBERON:0002791,9.08e-30,32;UBERON:0003056,2.18e-26,61;UBERON:0001869,1.02e-25,32;UBERON:0010371,3.79e-25,104;UBERON:0002619,1.08e-23,22;UBERON:0001950,1.38e-21,20;UBERON:0000956,1.06e-20,25;UBERON:0000203,1.06e-20,25;UBERON:0004121,3.25e-20,171;UBERON:0000924,3.25e-20,171;UBERON:0006601,3.25e-20,171;UBERON:0010314,1.30e-18,132;UBERON:0007023,1.36e-18,114;UBERON:0002420,1.98e-18,9;UBERON:0000125,1.98e-18,9;UBERON:0007245,1.98e-18,9;UBERON:0002308,1.98e-18,9;UBERON:0010009,1.98e-18,9;UBERON:0010011,1.98e-18,9;UBERON:0000454,1.98e-18,9;UBERON:0011216,2.04e-16,223;UBERON:0000349,2.59e-15,5;UBERON:0000988,3.87e-15,3;UBERON:0000025,3.87e-12,192;UBERON:0001871,1.76e-11,6;UBERON:0002784,4.29e-11,4;UBERON:0001894,4.52e-11,7;UBERON:0006222,4.52e-11,7;UBERON:0009663,5.17e-11,7;UBERON:0001897,1.46e-10,2;UBERON:0010225,1.46e-10,2;UBERON:0001876,1.69e-10,2;UBERON:0002148,1.69e-10,2;UBERON:0006331,1.69e-10,2;UBERON:0009662,1.69e-10,2;UBERON:0001875,2.14e-10,2;UBERON:0006514,2.14e-10,2;UBERON:0001872,1.64e-09,5;UBERON:0004111,1.95e-09,240;UBERON:0003076,5.35e-08,15;UBERON:0003057,5.35e-08,15;UBERON:0002298,8.41e-08,6;UBERON:0002240,1.07e-07,3;UBERON:0005174,1.07e-07,3;UBERON:0001137,1.07e-07,3;UBERON:0007846,4.54e-07,3;UBERON:0000043,4.54e-07,3;UBERON:0007845,4.54e-07,3|phase1_expression=0.908391896352783,0.214100523890983,0.986680828671798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.85870796139317,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.45071417671979,0,0.179389635688862,1.2813443329114,0,0.600182192168805,0,0.257640540045629,1.11670113798954,0.337552664482532,0.584622030967192,0,0.276149695926898,0.646584227275248,1.42003837006646,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,2.60279707715243,3.86644406388848,5.36052049069916,5.10351001322531,0,0,0,0.12269149171914,0,0,0,0,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0,0.173767228936166,0.783204629850962,0.343143423810856,0,0,0,0,0,0,0.248107807818777,1.53461973288062,0,0.384417447767103,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0.633322905892992,0.987884678879706,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0.371072392647405,5.98841394003583,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,1.01101699471016,0,0.937057782901357,0,0,0,0,0,4.28501866282686,0.505492637027904,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0.441280633457501,0,0,0,0.823040347426423,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0.101998217636322,0,1.20084057741958,1.50595916781192,0,0,0,0.837847203816763,1.3749625440701,0.717873024576814,0,0,0.223171457441873,0.604651252380536,0.360299883542404,0,0,0,0,0,0,0,1.63444087333891,0,0,0,0,0,0.850493793212345,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.85125642439766,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0,0.655745261419609,0,0,0.610131324509816,1.752673029891,0.573409195690071,0.998361463831671,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,2.48865185073115,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0.215649622793364,0.314531883711793,0,0,0,0,0,0.318004350653419,0,0,0,0,1.02766760154335,0,1.43670473151436,0.205116364240755,2.26864526599546,0.345786262321089,0.807378228159255,0,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,0.742913430802341,0,1.44680757550829,1.58539525484767,6.01672289920042,0,0,0,0,0,1.00885116665647,0,2.04895972216168,0,0,0,2.03909198930495,0.591954962065642,0,0,0.627944742804112,0.942693539496011,0,0,0,0,0.714765441766563,0,0,0.347716544605159,0,0.207216164163037,0,0.691259661814092,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0.994753875806841,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,1.96308467114945,4.75274240523338,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,2.15009374727177,0,0.475940431336403,6.10890966476528,0,1.11598505450025,1.38652688589425,0.432626562123789,0,0,0,0,0,0,0,0.303114792872958,0,1.65833887891756,1.34462894620464,0.213233981900981,0.952257725854961,0,0,0,0.954707374172474,0.404234377916439,0,0,0,0.143444410785353,1.33064142618405,0,0,0,0,0,0.122241444182866,0,1.33151354837103,0,0|short_description=p2@ENST00000530072,p2@ENST00000531629,p2@ENST00000532890}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000530072,ENST00000531629,ENST00000532890_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_2_at_ENST00000530072_5end,CAGE_peak_2_at_ENST00000531629_5end,CAGE_peak_2_at_ENST00000532890_5end | |||
|id=chr11:121972361..121972368,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.53e-08;6!CL:0000404;2.53e-08;6!CL:0000135;3.31e-07;3!CL:0000388;3.31e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.68e-10,8;CL:0000540,2.61e-08,6;CL:0000031,2.61e-08,6;CL:0000404,2.61e-08,6;CL:0000135,4.54e-07,3;CL:0000388,4.54e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.61e-09;82!CL:0000031;2.53e-08;6!UBERON:0006241;1.64e-07;3!UBERON:0003057;1.64e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.73e-39!86;UBERON:0001017!1.23e-38!82;UBERON:0001049!4.41e-38!57;UBERON:0005068!4.41e-38!57;UBERON:0006241!4.41e-38!57;UBERON:0007135!4.41e-38!57;UBERON:0000073!1.58e-37!94;UBERON:0001016!1.58e-37!94;UBERON:0003075!4.24e-34!86;UBERON:0007284!4.24e-34!86;UBERON:0007023!9.60e-34!115;UBERON:0002616!2.15e-33!59;UBERON:0002346!1.05e-31!90;UBERON:0000955!5.15e-30!69;UBERON:0006238!5.15e-30!69;UBERON:0002780!2.01e-29!41;UBERON:0001890!2.01e-29!41;UBERON:0006240!2.01e-29!41;UBERON:0003080!1.94e-28!42;UBERON:0002020!6.51e-26!34;UBERON:0003528!6.51e-26!34;UBERON:0001893!1.10e-25!34;UBERON:0002791!1.14e-24!33;UBERON:0001869!2.39e-23!32;UBERON:0003056!2.77e-23!61;UBERON:0004121!1.14e-21!169;UBERON:0000924!1.22e-20!173;UBERON:0006601!1.22e-20!173;UBERON:0000153!1.96e-19!129;UBERON:0007811!1.96e-19!129;UBERON:0000033!2.13e-19!123;UBERON:0000956!7.51e-18!25;UBERON:0000203!7.51e-18!25;UBERON:0002619!1.10e-15!22;UBERON:0001950!1.65e-15!20;UBERON:0000475!2.95e-14!365;UBERON:0003076!1.37e-10!15;UBERON:0003057!1.37e-10!15;UBERON:0002308!1.19e-09!9;UBERON:0002420!1.19e-09!9;UBERON:0000125!1.19e-09!9;UBERON:0007245!1.19e-09!9;UBERON:0010009!1.19e-09!9;UBERON:0010011!1.19e-09!9;UBERON:0000454!1.19e-09!9;UBERON:0000025!8.33e-09!194;UBERON:0000468!1.05e-08!659;UBERON:0001871!2.37e-08!7;UBERON:0002298!2.42e-08!8;UBERON:0000483!5.61e-08!309;UBERON:0000119!1.06e-07!312;UBERON:0000467!2.33e-07!625;UBERON:0004733!2.58e-07!12;UBERON:0002028!2.58e-07!12;UBERON:0007277!2.58e-07!12;UBERON:0000480!2.74e-07!626;UBERON:0000477!2.82e-07!286;UBERON:0009663!2.91e-07!7;UBERON:0004111!3.93e-07!241 | |||
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|short_description=p2@ENST00000530072,p2@ENST00000531629,p2@ENST00000532890 | |||
}} |
Revision as of 16:16, 10 September 2013
Short description: | p2@ENST00000530072, p2@ENST00000531629, p2@ENST00000532890 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000530072_5end, CAGE_peak_2_at_ENST00000531629_5end, CAGE_peak_2_at_ENST00000532890_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 25bp_to_ENST00000530072, ENST00000531629, ENST00000532890_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.68e-10 | 8 |
neuron | 2.61e-08 | 6 |
neuroblast | 2.61e-08 | 6 |
electrically signaling cell | 2.61e-08 | 6 |
fibrocyte | 4.54e-07 | 3 |
tendon cell | 4.54e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.