FFCP PHASE1:Hg19::chr11:117056889..117056905,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51092|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24272|TSSclassifier=N|UniProt=|association_with_transcript=222bp_to_ENST00000529441_5end|coexpression_cluster_id=C92|description=CAGE_peak_21_at_SIDT2_5end|id=chr11:117056889..117056905,+|ontology_enrichment_celltype=CL:0002057!1.27e-55!42;CL:0000860!2.57e-51!45;CL:0002194!4.07e-44!63;CL:0000576!4.07e-44!63;CL:0000040!4.07e-44!63;CL:0000559!4.07e-44!63;CL:0002009!1.77e-42!65;CL:0000839!8.61e-39!70;CL:0000557!4.08e-38!71;CL:0000766!1.65e-37!76;CL:0000763!1.68e-25!112;CL:0000049!1.68e-25!112;CL:0002087!4.74e-22!119;CL:0000738!6.48e-20!140;CL:0002031!2.69e-19!124;CL:0002393!5.32e-16!9;CL:0002397!5.32e-16!9;CL:0000037!2.43e-15!172;CL:0000566!2.43e-15!172;CL:0002032!2.89e-15!165;CL:0000837!2.89e-15!165;CL:0000988!6.03e-14!182;CL:0000875!2.69e-10!3;CL:0002396!2.69e-10!3|ontology_enrichment_celltype_v019=CL:0000875;2.56e-41;3!CL:0002396;2.56e-41;3!CL:0002393;1.62e-20;6!CL:0002397;1.62e-20;6!CL:0000576;4.60e-20;48!CL:0000766;1.38e-15;69!CL:0000473;3.29e-09;39!CL:0000234;3.29e-09;39!CL:0000860;9.36e-09;33!CL:0002057;9.36e-09;33!CL:0000763;2.14e-08;100!CL:0002087;5.75e-08;104|ontology_enrichment_celltype_v019_2=CL:0002393,2.67e-53,9;CL:0002397,2.67e-53,9;CL:0000875,2.57e-41,3;CL:0002396,2.57e-41,3;CL:0000473,2.26e-38,48;CL:0000234,2.26e-38,48;CL:0000860,5.59e-37,42;CL:0002057,5.59e-37,42;CL:0002194,1.84e-30,59;CL:0000576,1.84e-30,59;CL:0000040,1.84e-30,59;CL:0000559,1.84e-30,59;CL:0002009,1.94e-29,61;CL:0000766,2.88e-29,72;CL:0000839,3.76e-27,66;CL:0000557,9.84e-27,67;CL:0002087,6.90e-21,115;CL:0000738,2.98e-20,136;CL:0000763,3.75e-19,108;CL:0000049,3.75e-19,108;CL:0002031,4.55e-17,120;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002032,1.52e-14,161;CL:0000837,1.52e-14,161;CL:0000134,8.46e-07,354|ontology_enrichment_development_v019=CL:0002057;2.85e-24;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!8.64e-33!80;UBERON:0001474!7.40e-30!86;UBERON:0004765!8.35e-26!101;UBERON:0001434!8.35e-26!101;UBERON:0002390!1.64e-25!102;UBERON:0003061!1.64e-25!102;UBERON:0002405!9.31e-23!115;UBERON:0002193!2.18e-22!112;UBERON:0002204!6.27e-15!167;UBERON:0003081!1.28e-11!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-23,76;UBERON:0001474,1.13e-21,82;UBERON:0002390,3.26e-21,98;UBERON:0003061,3.26e-21,98;UBERON:0004765,1.18e-19,90;UBERON:0002193,3.87e-19,108;UBERON:0002405,5.52e-19,93;UBERON:0001434,1.41e-17,100;UBERON:0002204,5.27e-10,167;UBERON:0003081,1.59e-09,203|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,1.1507695692886,0,0.709446689665756,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0,1.92557416245656,1.27867425159808,0.659702600373432,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,1.00499466102697,0,0.65156653411535,0,0.736555271975129,0.632924774881769,3.16882929467913,1.27562579979026,1.67726916406701,0,0,0,6.84030584978997,6.16641699317179,7.85455861187926,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1220262649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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51092 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24272 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=222bp_to_ENST00000529441_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_21_at_SIDT2_5end | |||
|id=chr11:117056889..117056905,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.27e-55!42;CL:0000860!2.57e-51!45;CL:0002194!4.07e-44!63;CL:0000576!4.07e-44!63;CL:0000040!4.07e-44!63;CL:0000559!4.07e-44!63;CL:0002009!1.77e-42!65;CL:0000839!8.61e-39!70;CL:0000557!4.08e-38!71;CL:0000766!1.65e-37!76;CL:0000763!1.68e-25!112;CL:0000049!1.68e-25!112;CL:0002087!4.74e-22!119;CL:0000738!6.48e-20!140;CL:0002031!2.69e-19!124;CL:0002393!5.32e-16!9;CL:0002397!5.32e-16!9;CL:0000037!2.43e-15!172;CL:0000566!2.43e-15!172;CL:0002032!2.89e-15!165;CL:0000837!2.89e-15!165;CL:0000988!6.03e-14!182;CL:0000875!2.69e-10!3;CL:0002396!2.69e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.56e-41;3!CL:0002396;2.56e-41;3!CL:0002393;1.62e-20;6!CL:0002397;1.62e-20;6!CL:0000576;4.60e-20;48!CL:0000766;1.38e-15;69!CL:0000473;3.29e-09;39!CL:0000234;3.29e-09;39!CL:0000860;9.36e-09;33!CL:0002057;9.36e-09;33!CL:0000763;2.14e-08;100!CL:0002087;5.75e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.67e-53,9;CL:0002397,2.67e-53,9;CL:0000875,2.57e-41,3;CL:0002396,2.57e-41,3;CL:0000473,2.26e-38,48;CL:0000234,2.26e-38,48;CL:0000860,5.59e-37,42;CL:0002057,5.59e-37,42;CL:0002194,1.84e-30,59;CL:0000576,1.84e-30,59;CL:0000040,1.84e-30,59;CL:0000559,1.84e-30,59;CL:0002009,1.94e-29,61;CL:0000766,2.88e-29,72;CL:0000839,3.76e-27,66;CL:0000557,9.84e-27,67;CL:0002087,6.90e-21,115;CL:0000738,2.98e-20,136;CL:0000763,3.75e-19,108;CL:0000049,3.75e-19,108;CL:0002031,4.55e-17,120;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002032,1.52e-14,161;CL:0000837,1.52e-14,161;CL:0000134,8.46e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.85e-24;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.64e-33!80;UBERON:0001474!7.40e-30!86;UBERON:0004765!8.35e-26!101;UBERON:0001434!8.35e-26!101;UBERON:0002390!1.64e-25!102;UBERON:0003061!1.64e-25!102;UBERON:0002405!9.31e-23!115;UBERON:0002193!2.18e-22!112;UBERON:0002204!6.27e-15!167;UBERON:0003081!1.28e-11!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.84e-23,76;UBERON:0001474,1.13e-21,82;UBERON:0002390,3.26e-21,98;UBERON:0003061,3.26e-21,98;UBERON:0004765,1.18e-19,90;UBERON:0002193,3.87e-19,108;UBERON:0002405,5.52e-19,93;UBERON:0001434,1.41e-17,100;UBERON:0002204,5.27e-10,167;UBERON:0003081,1.59e-09,203 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.464858073811369,0.411167888021826,0.619412741790207,1.1507695692886,0,0.709446689665756,0.344745680736619,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0,1.92557416245656,1.27867425159808,0.659702600373432,0.598390972864896,0.852449501065388,0,0.56738522469114,0.622822248995575,1.00499466102697,0,0.65156653411535,0,0.736555271975129,0.632924774881769,3.16882929467913,1.27562579979026,1.67726916406701,0,0,0,6.84030584978997,6.16641699317179,7.85455861187926,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,1.2942852049117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@SIDT2 | |||
}} |
Revision as of 15:54, 10 September 2013
Short description: | p21@SIDT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_SIDT2_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 222bp_to_ENST00000529441_5end |
EntrezGene: | SIDT2 |
HGNC: | 24272 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.67e-53 | 9 |
CD14-positive, CD16-positive monocyte | 2.67e-53 | 9 |
non-classical monocyte | 2.57e-41 | 3 |
CD14-low, CD16-positive monocyte | 2.57e-41 | 3 |
defensive cell | 2.26e-38 | 48 |
phagocyte | 2.26e-38 | 48 |
classical monocyte | 5.59e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.59e-37 | 42 |
monopoietic cell | 1.84e-30 | 59 |
monocyte | 1.84e-30 | 59 |
monoblast | 1.84e-30 | 59 |
promonocyte | 1.84e-30 | 59 |
macrophage dendritic cell progenitor | 1.94e-29 | 61 |
myeloid leukocyte | 2.88e-29 | 72 |
myeloid lineage restricted progenitor cell | 3.76e-27 | 66 |
granulocyte monocyte progenitor cell | 9.84e-27 | 67 |
nongranular leukocyte | 6.90e-21 | 115 |
leukocyte | 2.98e-20 | 136 |
myeloid cell | 3.75e-19 | 108 |
common myeloid progenitor | 3.75e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 4.55e-17 | 120 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.52e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.52e-14 | 161 |
mesenchymal cell | 8.46e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.84e-23 | 76 |
bone element | 1.13e-21 | 82 |
hematopoietic system | 3.26e-21 | 98 |
blood island | 3.26e-21 | 98 |
skeletal element | 1.18e-19 | 90 |
hemolymphoid system | 3.87e-19 | 108 |
immune system | 5.52e-19 | 93 |
skeletal system | 1.41e-17 | 100 |
musculoskeletal system | 5.27e-10 | 167 |
lateral plate mesoderm | 1.59e-09 | 203 |
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