FFCP PHASE1:Hg19::chr10:90988035..90988053,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C54|description=CAGE_peak_at_chr10:90988035..90988053,-|id=chr10:90988035..90988053,-|ontology_enrichment_celltype=CL:0002194!1.08e-12!63;CL:0000576!1.08e-12!63;CL:0000040!1.08e-12!63;CL:0000559!1.08e-12!63;CL:0002009!5.13e-12!65;CL:0000839!2.94e-11!70;CL:0000557!5.74e-11!71;CL:0000766!2.05e-10!76;CL:0000235!1.13e-08!10|ontology_enrichment_celltype_v019=CL:0000235;2.18e-78;6!CL:0000840;4.86e-21;5!CL:0000511;1.84e-14;1!CL:0002625;1.84e-14;1!CL:0000216;1.84e-14;1!CL:0000990;3.03e-14;8!CL:0000451;9.19e-12;10!CL:0000473;2.38e-10;39!CL:0000234;2.38e-10;39|ontology_enrichment_celltype_v019_2=CL:0000235,1.19e-78,6;CL:0000840,4.86e-21,5;CL:0001029,4.86e-21,5;CL:0002194,4.23e-17,59;CL:0000576,4.23e-17,59;CL:0000040,4.23e-17,59;CL:0000559,4.23e-17,59;CL:0002009,1.61e-16,61;CL:0000839,3.23e-15,66;CL:0000557,5.57e-15,67;CL:0000511,1.84e-14,1;CL:0002625,1.84e-14,1;CL:0000216,1.84e-14,1;CL:0000990,3.03e-14,8;CL:0000766,6.86e-14,72;CL:0000451,9.19e-12,10;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0000763,5.61e-09,108;CL:0000049,5.61e-09,108;CL:0002087,2.25e-08,115;CL:0002031,5.50e-08,120;CL:0000738,6.24e-07,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.94e-18;3!DOID:127;1.94e-18;3!DOID:0060072;4.40e-14;4|ontology_enrichment_disease_v019_2=DOID:0060084,1.94e-18,3;DOID:127,1.94e-18,3;DOID:0060072,4.40e-14,4|ontology_enrichment_uberon=UBERON:0002371!1.87e-09!80;UBERON:0001474!3.62e-08!86;UBERON:0002204!4.94e-08!167;UBERON:0004765!4.97e-08!101;UBERON:0001434!4.97e-08!101;UBERON:0002193!5.50e-08!112;UBERON:0002390!1.07e-07!102;UBERON:0003061!1.07e-07!102;UBERON:0002405!2.07e-07!115|ontology_enrichment_uberon_v019=UBERON:0001136;1.84e-14;1!UBERON:0001343;1.84e-14;1!UBERON:0004910;1.84e-14;1!UBERON:0004813;1.84e-14;1!UBERON:0004909;7.03e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.84e-14,1;UBERON:0001343,1.84e-14,1;UBERON:0004910,1.84e-14,1;UBERON:0005154,1.84e-14,1;UBERON:0005295,1.84e-14,1;UBERON:0004813,1.84e-14,1;UBERON:0005297,1.84e-14,1;UBERON:0005294,1.84e-14,1;UBERON:0010141,1.84e-14,1;UBERON:0005891,1.84e-14,1;UBERON:0002371,4.05e-13,76;UBERON:0001474,4.22e-12,82;UBERON:0004765,5.95e-11,90;UBERON:0002405,1.43e-10,93;UBERON:0002390,5.49e-10,98;UBERON:0003061,5.49e-10,98;UBERON:0001434,9.07e-10,100;UBERON:0002193,5.61e-09,108;UBERON:0004909,7.03e-08,2;UBERON:0002204,8.24e-07,167|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0.527533956456907,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.242584061187816,0,0.411167888021826,0,0.575384784644301,0,0.47296445977717,0,0,0,0,0,0.674170453335254,0,0,0,0.659702600373432,0,0,0.290209238628584,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,4.54366351116557,5.04976238167875,9.70593111787716,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0.280901613404497,0,0,0.309977343527296,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,1.96973604869918,1.8720341211139,1.63494278517601,0.93733833986777,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.487426979262569,0,0.136499911407986,0.141405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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90988035..90988053,- | |||
|id=chr10:90988035..90988053,- | |||
|ontology_enrichment_celltype=CL:0002194!1.08e-12!63;CL:0000576!1.08e-12!63;CL:0000040!1.08e-12!63;CL:0000559!1.08e-12!63;CL:0002009!5.13e-12!65;CL:0000839!2.94e-11!70;CL:0000557!5.74e-11!71;CL:0000766!2.05e-10!76;CL:0000235!1.13e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.18e-78;6!CL:0000840;4.86e-21;5!CL:0000511;1.84e-14;1!CL:0002625;1.84e-14;1!CL:0000216;1.84e-14;1!CL:0000990;3.03e-14;8!CL:0000451;9.19e-12;10!CL:0000473;2.38e-10;39!CL:0000234;2.38e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.19e-78,6;CL:0000840,4.86e-21,5;CL:0001029,4.86e-21,5;CL:0002194,4.23e-17,59;CL:0000576,4.23e-17,59;CL:0000040,4.23e-17,59;CL:0000559,4.23e-17,59;CL:0002009,1.61e-16,61;CL:0000839,3.23e-15,66;CL:0000557,5.57e-15,67;CL:0000511,1.84e-14,1;CL:0002625,1.84e-14,1;CL:0000216,1.84e-14,1;CL:0000990,3.03e-14,8;CL:0000766,6.86e-14,72;CL:0000451,9.19e-12,10;CL:0000473,1.17e-09,48;CL:0000234,1.17e-09,48;CL:0000763,5.61e-09,108;CL:0000049,5.61e-09,108;CL:0002087,2.25e-08,115;CL:0002031,5.50e-08,120;CL:0000738,6.24e-07,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.94e-18;3!DOID:127;1.94e-18;3!DOID:0060072;4.40e-14;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.94e-18,3;DOID:127,1.94e-18,3;DOID:0060072,4.40e-14,4 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.87e-09!80;UBERON:0001474!3.62e-08!86;UBERON:0002204!4.94e-08!167;UBERON:0004765!4.97e-08!101;UBERON:0001434!4.97e-08!101;UBERON:0002193!5.50e-08!112;UBERON:0002390!1.07e-07!102;UBERON:0003061!1.07e-07!102;UBERON:0002405!2.07e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.84e-14;1!UBERON:0001343;1.84e-14;1!UBERON:0004910;1.84e-14;1!UBERON:0004813;1.84e-14;1!UBERON:0004909;7.03e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.84e-14,1;UBERON:0001343,1.84e-14,1;UBERON:0004910,1.84e-14,1;UBERON:0005154,1.84e-14,1;UBERON:0005295,1.84e-14,1;UBERON:0004813,1.84e-14,1;UBERON:0005297,1.84e-14,1;UBERON:0005294,1.84e-14,1;UBERON:0010141,1.84e-14,1;UBERON:0005891,1.84e-14,1;UBERON:0002371,4.05e-13,76;UBERON:0001474,4.22e-12,82;UBERON:0004765,5.95e-11,90;UBERON:0002405,1.43e-10,93;UBERON:0002390,5.49e-10,98;UBERON:0003061,5.49e-10,98;UBERON:0001434,9.07e-10,100;UBERON:0002193,5.61e-09,108;UBERON:0004909,7.03e-08,2;UBERON:0002204,8.24e-07,167 | |||
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|short_description=p@chr10:90988035..90988053,- | |||
}} |
Revision as of 14:54, 10 September 2013
Short description: | p@chr10:90988035..90988053, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:90988035..90988053, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.19e-78 | 6 |
immature conventional dendritic cell | 4.86e-21 | 5 |
common dendritic progenitor | 4.86e-21 | 5 |
monopoietic cell | 4.23e-17 | 59 |
monocyte | 4.23e-17 | 59 |
monoblast | 4.23e-17 | 59 |
promonocyte | 4.23e-17 | 59 |
macrophage dendritic cell progenitor | 1.61e-16 | 61 |
myeloid lineage restricted progenitor cell | 3.23e-15 | 66 |
granulocyte monocyte progenitor cell | 5.57e-15 | 67 |
androgen binding protein secreting cell | 1.84e-14 | 1 |
seminiferous tubule epithelial cell | 1.84e-14 | 1 |
Sertoli cell | 1.84e-14 | 1 |
conventional dendritic cell | 3.03e-14 | 8 |
myeloid leukocyte | 6.86e-14 | 72 |
dendritic cell | 9.19e-12 | 10 |
defensive cell | 1.17e-09 | 48 |
phagocyte | 1.17e-09 | 48 |
myeloid cell | 5.61e-09 | 108 |
common myeloid progenitor | 5.61e-09 | 108 |
nongranular leukocyte | 2.25e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 5.50e-08 | 120 |
leukocyte | 6.24e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.84e-14 | 1 |
seminiferous tubule of testis | 1.84e-14 | 1 |
epithelium of male gonad | 1.84e-14 | 1 |
epithelial cord | 1.84e-14 | 1 |
sex cord | 1.84e-14 | 1 |
seminiferous tubule epithelium | 1.84e-14 | 1 |
testis sex cord | 1.84e-14 | 1 |
genital ridge | 1.84e-14 | 1 |
primitive sex cord of indifferent gonad | 1.84e-14 | 1 |
coelomic epithelium | 1.84e-14 | 1 |
bone marrow | 4.05e-13 | 76 |
bone element | 4.22e-12 | 82 |
skeletal element | 5.95e-11 | 90 |
immune system | 1.43e-10 | 93 |
hematopoietic system | 5.49e-10 | 98 |
blood island | 5.49e-10 | 98 |
skeletal system | 9.07e-10 | 100 |
hemolymphoid system | 5.61e-09 | 108 |
epithelium of gonad | 7.03e-08 | 2 |
musculoskeletal system | 8.24e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.94e-18 | 3 |
leiomyoma | 1.94e-18 | 3 |
benign neoplasm | 4.40e-14 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.