FFCP PHASE1:Hg19::chr10:73848236..73848250,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9806|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13564|TSSclassifier=S|UniProt=|association_with_transcript=28bp_to_ENST00000495888_5end|coexpression_cluster_id=C676|description=CAGE_peak_2_at_SPOCK2_5end|id=chr10:73848236..73848250,-|ontology_enrichment_celltype=CL:0000738!8.06e-18!140;CL:0000791!5.49e-15!18;CL:0000789!5.49e-15!18;CL:0002420!5.49e-15!18;CL:0002419!5.49e-15!18;CL:0000790!5.49e-15!18;CL:0002087!1.16e-13!119;CL:0000542!1.87e-11!53;CL:0000051!1.87e-11!53;CL:0002031!2.66e-11!124;CL:0000838!3.73e-11!52;CL:0000084!4.57e-11!25;CL:0000827!4.57e-11!25;CL:0000037!9.95e-10!172;CL:0000566!9.95e-10!172;CL:0000625!1.49e-09!11;CL:0000988!2.62e-09!182;CL:0002032!1.99e-08!165;CL:0000837!1.99e-08!165;CL:0002057!9.15e-07!42|ontology_enrichment_celltype_v019=CL:0000791;4.00e-17;18!CL:0000789;4.00e-17;18!CL:0002419;4.00e-17;18!CL:0000084;1.83e-11;25!CL:0000625;7.85e-11;11!CL:0000542;1.12e-07;53!CL:0000624;2.48e-07;6!CL:0002087;4.52e-07;104!CL:0000860;5.11e-07;33!CL:0002057;5.11e-07;33|ontology_enrichment_celltype_v019_2=CL:0000738,2.98e-17,136;CL:0000791,4.20e-17,18;CL:0000789,4.20e-17,18;CL:0002420,4.20e-17,18;CL:0002419,4.20e-17,18;CL:0000790,4.20e-17,18;CL:0002087,1.81e-15,115;CL:0000542,4.61e-12,53;CL:0000051,4.61e-12,53;CL:0000838,1.01e-11,52;CL:0000084,1.90e-11,25;CL:0000827,1.90e-11,25;CL:0002031,4.69e-11,120;CL:0000625,8.22e-11,11;CL:0000037,1.72e-09,168;CL:0000988,5.79e-09,177;CL:0002032,2.52e-08,161;CL:0000837,2.52e-08,161;CL:0000624,2.49e-07,6;CL:0000860,9.51e-07,42;CL:0002057,9.51e-07,42|ontology_enrichment_development_v019=CL:0000790;4.00e-17;18!CL:0000051;1.12e-07;53!UBERON:0006601;4.93e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.49e-44!115;UBERON:0001049!3.17e-30!57;UBERON:0005068!3.17e-30!57;UBERON:0006241!3.17e-30!57;UBERON:0007135!3.17e-30!57;UBERON:0002616!1.18e-25!59;UBERON:0001017!3.29e-25!82;UBERON:0005743!8.35e-24!86;UBERON:0002780!1.15e-23!41;UBERON:0001890!1.15e-23!41;UBERON:0006240!1.15e-23!41;UBERON:0003080!1.16e-22!42;UBERON:0000955!1.04e-21!69;UBERON:0006238!1.04e-21!69;UBERON:0000073!5.30e-21!94;UBERON:0001016!5.30e-21!94;UBERON:0002020!2.28e-20!34;UBERON:0003528!2.28e-20!34;UBERON:0003075!3.58e-20!86;UBERON:0007284!3.58e-20!86;UBERON:0001893!3.79e-20!34;UBERON:0002791!1.77e-19!33;UBERON:0001869!3.69e-19!32;UBERON:0002346!3.92e-18!90;UBERON:0000956!4.08e-15!25;UBERON:0000203!4.08e-15!25;UBERON:0002619!2.17e-14!22;UBERON:0003056!2.20e-13!61;UBERON:0001950!3.29e-13!20;UBERON:0000153!2.95e-10!129;UBERON:0007811!2.95e-10!129;UBERON:0003076!1.17e-08!15;UBERON:0003057!1.17e-08!15;UBERON:0000033!2.00e-08!123;UBERON:0000025!1.41e-07!194;UBERON:0004732!2.92e-07!13;UBERON:0004121!3.12e-07!169;UBERON:0004733!7.41e-07!12;UBERON:0002028!7.41e-07!12;UBERON:0007277!7.41e-07!12|ontology_enrichment_uberon_v019=UBERON:0003528;4.07e-20;34!UBERON:0002020;4.07e-20;34!UBERON:0001893;4.59e-20;34!UBERON:0001869;5.20e-20;32!UBERON:0002791;8.73e-20;32!UBERON:0002780;1.46e-19;41!UBERON:0001890;1.46e-19;41!UBERON:0000073;1.85e-18;53!UBERON:0002616;1.85e-18;53!UBERON:0000956;2.76e-17;25!UBERON:0000203;2.76e-17;25!UBERON:0002619;2.05e-16;22!UBERON:0001950;4.84e-15;20!UBERON:0007023;1.53e-12;114!UBERON:0000955;2.48e-12;68!UBERON:0001017;6.54e-12;75!UBERON:0001016;3.62e-10;83!UBERON:0000125;1.51e-07;9!UBERON:0002308;1.51e-07;9!UBERON:0002420;2.43e-07;9!UBERON:0007245;2.43e-07;9!UBERON:0010009;2.43e-07;9!UBERON:0010011;2.43e-07;9!UBERON:0000454;2.43e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-45,114;UBERON:0001049,4.24e-34,56;UBERON:0005068,4.24e-34,56;UBERON:0006241,4.24e-34,56;UBERON:0007135,4.24e-34,56;UBERON:0000073,7.31e-32,53;UBERON:0002616,7.31e-32,53;UBERON:0001017,1.72e-27,81;UBERON:0002780,3.69e-27,41;UBERON:0001890,3.69e-27,41;UBERON:0003080,3.69e-27,41;UBERON:0006240,3.69e-27,41;UBERON:0000955,1.14e-24,68;UBERON:0006238,1.14e-24,68;UBERON:0001016,2.15e-23,89;UBERON:0003528,2.45e-23,34;UBERON:0002020,2.45e-23,34;UBERON:0001893,4.40e-23,34;UBERON:0001869,6.16e-22,32;UBERON:0002791,1.12e-21,32;UBERON:0003075,5.16e-20,82;UBERON:0007284,5.16e-20,82;UBERON:0002346,3.95e-18,86;UBERON:0000956,2.98e-17,25;UBERON:0000203,2.98e-17,25;UBERON:0002619,2.06e-16,22;UBERON:0003056,3.83e-15,61;UBERON:0001950,4.80e-15,20;UBERON:0010371,2.94e-12,104;UBERON:0010314,1.62e-10,132;UBERON:0011216,2.95e-09,223;UBERON:0003076,3.88e-08,15;UBERON:0003057,3.88e-08,15;UBERON:0000025,4.44e-08,192;UBERON:0000125,1.54e-07,9;UBERON:0002308,1.54e-07,9;UBERON:0002420,2.48e-07,9;UBERON:0007245,2.48e-07,9;UBERON:0010009,2.48e-07,9;UBERON:0010011,2.48e-07,9;UBERON:0000454,2.48e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,27.7679348246705,85.1317424926362,0,0,0,0.331397375727916,0,0,0,0,0.738726348460727,0,0.313454721478088,9.15955158819382,3.28498620174922,2.38531015230125,0,0,0,54.2842702051488,139.713900907385,25.0802119772043,0,0,0,0,0,0,21.6058209327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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9806 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13564 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENST00000495888_5end | |||
|coexpression_cluster_id=C676 | |||
|description=CAGE_peak_2_at_SPOCK2_5end | |||
|id=chr10:73848236..73848250,- | |||
|ontology_enrichment_celltype=CL:0000738!8.06e-18!140;CL:0000791!5.49e-15!18;CL:0000789!5.49e-15!18;CL:0002420!5.49e-15!18;CL:0002419!5.49e-15!18;CL:0000790!5.49e-15!18;CL:0002087!1.16e-13!119;CL:0000542!1.87e-11!53;CL:0000051!1.87e-11!53;CL:0002031!2.66e-11!124;CL:0000838!3.73e-11!52;CL:0000084!4.57e-11!25;CL:0000827!4.57e-11!25;CL:0000037!9.95e-10!172;CL:0000566!9.95e-10!172;CL:0000625!1.49e-09!11;CL:0000988!2.62e-09!182;CL:0002032!1.99e-08!165;CL:0000837!1.99e-08!165;CL:0002057!9.15e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.00e-17;18!CL:0000789;4.00e-17;18!CL:0002419;4.00e-17;18!CL:0000084;1.83e-11;25!CL:0000625;7.85e-11;11!CL:0000542;1.12e-07;53!CL:0000624;2.48e-07;6!CL:0002087;4.52e-07;104!CL:0000860;5.11e-07;33!CL:0002057;5.11e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.98e-17,136;CL:0000791,4.20e-17,18;CL:0000789,4.20e-17,18;CL:0002420,4.20e-17,18;CL:0002419,4.20e-17,18;CL:0000790,4.20e-17,18;CL:0002087,1.81e-15,115;CL:0000542,4.61e-12,53;CL:0000051,4.61e-12,53;CL:0000838,1.01e-11,52;CL:0000084,1.90e-11,25;CL:0000827,1.90e-11,25;CL:0002031,4.69e-11,120;CL:0000625,8.22e-11,11;CL:0000037,1.72e-09,168;CL:0000988,5.79e-09,177;CL:0002032,2.52e-08,161;CL:0000837,2.52e-08,161;CL:0000624,2.49e-07,6;CL:0000860,9.51e-07,42;CL:0002057,9.51e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000790;4.00e-17;18!CL:0000051;1.12e-07;53!UBERON:0006601;4.93e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-44!115;UBERON:0001049!3.17e-30!57;UBERON:0005068!3.17e-30!57;UBERON:0006241!3.17e-30!57;UBERON:0007135!3.17e-30!57;UBERON:0002616!1.18e-25!59;UBERON:0001017!3.29e-25!82;UBERON:0005743!8.35e-24!86;UBERON:0002780!1.15e-23!41;UBERON:0001890!1.15e-23!41;UBERON:0006240!1.15e-23!41;UBERON:0003080!1.16e-22!42;UBERON:0000955!1.04e-21!69;UBERON:0006238!1.04e-21!69;UBERON:0000073!5.30e-21!94;UBERON:0001016!5.30e-21!94;UBERON:0002020!2.28e-20!34;UBERON:0003528!2.28e-20!34;UBERON:0003075!3.58e-20!86;UBERON:0007284!3.58e-20!86;UBERON:0001893!3.79e-20!34;UBERON:0002791!1.77e-19!33;UBERON:0001869!3.69e-19!32;UBERON:0002346!3.92e-18!90;UBERON:0000956!4.08e-15!25;UBERON:0000203!4.08e-15!25;UBERON:0002619!2.17e-14!22;UBERON:0003056!2.20e-13!61;UBERON:0001950!3.29e-13!20;UBERON:0000153!2.95e-10!129;UBERON:0007811!2.95e-10!129;UBERON:0003076!1.17e-08!15;UBERON:0003057!1.17e-08!15;UBERON:0000033!2.00e-08!123;UBERON:0000025!1.41e-07!194;UBERON:0004732!2.92e-07!13;UBERON:0004121!3.12e-07!169;UBERON:0004733!7.41e-07!12;UBERON:0002028!7.41e-07!12;UBERON:0007277!7.41e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.07e-20;34!UBERON:0002020;4.07e-20;34!UBERON:0001893;4.59e-20;34!UBERON:0001869;5.20e-20;32!UBERON:0002791;8.73e-20;32!UBERON:0002780;1.46e-19;41!UBERON:0001890;1.46e-19;41!UBERON:0000073;1.85e-18;53!UBERON:0002616;1.85e-18;53!UBERON:0000956;2.76e-17;25!UBERON:0000203;2.76e-17;25!UBERON:0002619;2.05e-16;22!UBERON:0001950;4.84e-15;20!UBERON:0007023;1.53e-12;114!UBERON:0000955;2.48e-12;68!UBERON:0001017;6.54e-12;75!UBERON:0001016;3.62e-10;83!UBERON:0000125;1.51e-07;9!UBERON:0002308;1.51e-07;9!UBERON:0002420;2.43e-07;9!UBERON:0007245;2.43e-07;9!UBERON:0010009;2.43e-07;9!UBERON:0010011;2.43e-07;9!UBERON:0000454;2.43e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.49e-45,114;UBERON:0001049,4.24e-34,56;UBERON:0005068,4.24e-34,56;UBERON:0006241,4.24e-34,56;UBERON:0007135,4.24e-34,56;UBERON:0000073,7.31e-32,53;UBERON:0002616,7.31e-32,53;UBERON:0001017,1.72e-27,81;UBERON:0002780,3.69e-27,41;UBERON:0001890,3.69e-27,41;UBERON:0003080,3.69e-27,41;UBERON:0006240,3.69e-27,41;UBERON:0000955,1.14e-24,68;UBERON:0006238,1.14e-24,68;UBERON:0001016,2.15e-23,89;UBERON:0003528,2.45e-23,34;UBERON:0002020,2.45e-23,34;UBERON:0001893,4.40e-23,34;UBERON:0001869,6.16e-22,32;UBERON:0002791,1.12e-21,32;UBERON:0003075,5.16e-20,82;UBERON:0007284,5.16e-20,82;UBERON:0002346,3.95e-18,86;UBERON:0000956,2.98e-17,25;UBERON:0000203,2.98e-17,25;UBERON:0002619,2.06e-16,22;UBERON:0003056,3.83e-15,61;UBERON:0001950,4.80e-15,20;UBERON:0010371,2.94e-12,104;UBERON:0010314,1.62e-10,132;UBERON:0011216,2.95e-09,223;UBERON:0003076,3.88e-08,15;UBERON:0003057,3.88e-08,15;UBERON:0000025,4.44e-08,192;UBERON:0000125,1.54e-07,9;UBERON:0002308,1.54e-07,9;UBERON:0002420,2.48e-07,9;UBERON:0007245,2.48e-07,9;UBERON:0010009,2.48e-07,9;UBERON:0010011,2.48e-07,9;UBERON:0000454,2.48e-07,9 | |||
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| |||
|short_description=p2@SPOCK2 | |||
}} |
Revision as of 14:17, 10 September 2013
Short description: | p2@SPOCK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SPOCK2_5end |
Coexpression cluster: | C676_serous_CD8_CD4_Natural_gall_cerebellum_Basophils |
Association with transcript: | 28bp_to_ENST00000495888_5end |
EntrezGene: | SPOCK2 |
HGNC: | 13564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.98e-17 | 136 |
mature alpha-beta T cell | 4.20e-17 | 18 |
alpha-beta T cell | 4.20e-17 | 18 |
immature T cell | 4.20e-17 | 18 |
mature T cell | 4.20e-17 | 18 |
immature alpha-beta T cell | 4.20e-17 | 18 |
nongranular leukocyte | 1.81e-15 | 115 |
lymphocyte | 4.61e-12 | 53 |
common lymphoid progenitor | 4.61e-12 | 53 |
lymphoid lineage restricted progenitor cell | 1.01e-11 | 52 |
T cell | 1.90e-11 | 25 |
pro-T cell | 1.90e-11 | 25 |
hematopoietic lineage restricted progenitor cell | 4.69e-11 | 120 |
CD8-positive, alpha-beta T cell | 8.22e-11 | 11 |
hematopoietic stem cell | 1.72e-09 | 168 |
hematopoietic cell | 5.79e-09 | 177 |
hematopoietic oligopotent progenitor cell | 2.52e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.52e-08 | 161 |
CD4-positive, alpha-beta T cell | 2.49e-07 | 6 |
classical monocyte | 9.51e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.51e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.