FFCP PHASE1:Hg19::chr10:72576095..72576115,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10817|TSSclassifier=S|UniProt=O95470|association_with_transcript=-24bp_to_AK314615_5end|coexpression_cluster_id=C3041|description=CAGE_peak_7_at_SGPL1_5end|id=chr10:72576095..72576115,+|ontology_enrichment_celltype=CL:0002009!6.63e-08!65;CL:0002194!9.01e-08!63;CL:0000576!9.01e-08!63;CL:0000040!9.01e-08!63;CL:0000559!9.01e-08!63;CL:0000557!7.22e-07!71|ontology_enrichment_celltype_v019=CL:0002619;1.21e-19;3!CL:0000235;1.78e-16;6!CL:0000473;8.89e-13;39!CL:0000234;8.89e-13;39!CL:0000840;1.05e-09;5!CL:0000576;2.53e-08;48!CL:0000766;1.18e-07;69!CL:0000860;2.48e-07;33!CL:0002057;2.48e-07;33!CL:0000222;3.96e-07;1|ontology_enrichment_celltype_v019_2=CL:0002194,1.71e-25,59;CL:0000576,1.71e-25,59;CL:0000040,1.71e-25,59;CL:0000559,1.71e-25,59;CL:0002009,1.49e-24,61;CL:0000766,6.47e-23,72;CL:0000839,1.89e-22,66;CL:0000557,4.56e-22,67;CL:0002619,1.30e-19,3;CL:0000235,2.31e-16,6;CL:0000763,4.40e-14,108;CL:0000049,4.40e-14,108;CL:0000473,5.53e-13,48;CL:0000234,5.53e-13,48;CL:0002087,1.90e-11,115;CL:0002031,7.90e-11,120;CL:0000738,1.97e-10,136;CL:0000840,9.63e-10,5;CL:0001029,9.63e-10,5;CL:0002032,3.00e-08,161;CL:0000837,3.00e-08,161;CL:0000037,9.34e-08,168;CL:0000988,3.52e-07,177|ontology_enrichment_development_v019=UBERON:0001045;3.96e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.27e-07;1!DOID:1357;1.27e-07;1|ontology_enrichment_disease_v019_2=DOID:0050619,1.20e-07,1;DOID:1357,1.20e-07,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001764;1.27e-07;1!UBERON:0001825;1.27e-07;1!UBERON:0001154;3.96e-07;1!UBERON:0001153;3.96e-07;1!UBERON:0009854;3.96e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-19,76;UBERON:0001474,2.00e-17,82;UBERON:0004765,1.41e-15,90;UBERON:0002405,5.78e-15,93;UBERON:0002390,5.00e-14,98;UBERON:0003061,5.00e-14,98;UBERON:0001434,1.12e-13,100;UBERON:0002193,2.06e-12,108;UBERON:0002204,8.16e-08,167;UBERON:0001764,1.20e-07,1;UBERON:0001825,1.20e-07,1;UBERON:0001154,6.57e-07,1;UBERON:0001153,6.57e-07,1;UBERON:0001045,6.57e-07,1|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0,0,0.369363174230364,0.612002073732759,0.313454721478088,0.286235987131057,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.15005590751826,3.2389366601898,8.24241816429397,0.726991193897824,0,0.727752183563449,0.929716147622738,1.6446715520873,0,0,0.256160706529101,0.47296445977717,0,0,0,0.564727018627814,0.818718450173537,0.898893937780338,0.918251677112708,0.641858054152187,0,0,0.199463657621632,0.426224750532694,1.16083695451434,2.26954089876456,1.86846674698672,0,0,0.217188844705117,1.21079900526674,2.57794345191295,1.89877432464531,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,1.5905718941022,0,0.0945348171640679,0.665188192387692,0.527008714158756,0.261958150995425,0,0.370784442784429,4.86821090482025,2.43781632218974,1.46253756570752,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,0,0,0.496971951695318,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.292311015483596,0,0.0920498986422993,0,0,0.201504196455281,0,0.386521706326594,0.272746120590835,0,0,0.132529768321485,0,0,0.252320850875628,0,1.56449532329816,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,2.53510069643662,0,1.18157981336281,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,1.05667824812239,0,0,0,0,0,3.44703808522356,0.702012795417713,2.0808362720422,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.499864955910285,1.2162378064119,2.00902836572851,0,0.479249710983165,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.623912584592421,0,0.157702415033935,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.0868836144680828,0.195801157462741,0.686286847621712,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0,0.512556597022804,0.511707249066704,0,0,0.308419387605311,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.0770153371044148,0,0,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0.9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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10817 | |||
|TSSclassifier=S | |||
|UniProt=O95470 | |||
|association_with_transcript=-24bp_to_AK314615_5end | |||
|coexpression_cluster_id=C3041 | |||
|description=CAGE_peak_7_at_SGPL1_5end | |||
|id=chr10:72576095..72576115,+ | |||
|ontology_enrichment_celltype=CL:0002009!6.63e-08!65;CL:0002194!9.01e-08!63;CL:0000576!9.01e-08!63;CL:0000040!9.01e-08!63;CL:0000559!9.01e-08!63;CL:0000557!7.22e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002619;1.21e-19;3!CL:0000235;1.78e-16;6!CL:0000473;8.89e-13;39!CL:0000234;8.89e-13;39!CL:0000840;1.05e-09;5!CL:0000576;2.53e-08;48!CL:0000766;1.18e-07;69!CL:0000860;2.48e-07;33!CL:0002057;2.48e-07;33!CL:0000222;3.96e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.71e-25,59;CL:0000576,1.71e-25,59;CL:0000040,1.71e-25,59;CL:0000559,1.71e-25,59;CL:0002009,1.49e-24,61;CL:0000766,6.47e-23,72;CL:0000839,1.89e-22,66;CL:0000557,4.56e-22,67;CL:0002619,1.30e-19,3;CL:0000235,2.31e-16,6;CL:0000763,4.40e-14,108;CL:0000049,4.40e-14,108;CL:0000473,5.53e-13,48;CL:0000234,5.53e-13,48;CL:0002087,1.90e-11,115;CL:0002031,7.90e-11,120;CL:0000738,1.97e-10,136;CL:0000840,9.63e-10,5;CL:0001029,9.63e-10,5;CL:0002032,3.00e-08,161;CL:0000837,3.00e-08,161;CL:0000037,9.34e-08,168;CL:0000988,3.52e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.96e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.27e-07;1!DOID:1357;1.27e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.20e-07,1;DOID:1357,1.20e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;1.27e-07;1!UBERON:0001825;1.27e-07;1!UBERON:0001154;3.96e-07;1!UBERON:0001153;3.96e-07;1!UBERON:0009854;3.96e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.59e-19,76;UBERON:0001474,2.00e-17,82;UBERON:0004765,1.41e-15,90;UBERON:0002405,5.78e-15,93;UBERON:0002390,5.00e-14,98;UBERON:0003061,5.00e-14,98;UBERON:0001434,1.12e-13,100;UBERON:0002193,2.06e-12,108;UBERON:0002204,8.16e-08,167;UBERON:0001764,1.20e-07,1;UBERON:0001825,1.20e-07,1;UBERON:0001154,6.57e-07,1;UBERON:0001153,6.57e-07,1;UBERON:0001045,6.57e-07,1 | |||
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| |||
|short_description=p7@SGPL1 | |||
}} |
Revision as of 14:12, 10 September 2013
Short description: | p7@SGPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SGPL1_5end |
Coexpression cluster: | C3041_CD14_maxillary_Dendritic_Macrophage_Monocytederived_alveolar_umbilical |
Association with transcript: | -24bp_to_AK314615_5end |
EntrezGene: | SGPL1 |
HGNC: | 10817 |
UniProt: | O95470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.71e-25 | 59 |
monocyte | 1.71e-25 | 59 |
monoblast | 1.71e-25 | 59 |
promonocyte | 1.71e-25 | 59 |
macrophage dendritic cell progenitor | 1.49e-24 | 61 |
myeloid leukocyte | 6.47e-23 | 72 |
myeloid lineage restricted progenitor cell | 1.89e-22 | 66 |
granulocyte monocyte progenitor cell | 4.56e-22 | 67 |
adult endothelial progenitor cell | 1.30e-19 | 3 |
macrophage | 2.31e-16 | 6 |
myeloid cell | 4.40e-14 | 108 |
common myeloid progenitor | 4.40e-14 | 108 |
defensive cell | 5.53e-13 | 48 |
phagocyte | 5.53e-13 | 48 |
nongranular leukocyte | 1.90e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.90e-11 | 120 |
leukocyte | 1.97e-10 | 136 |
immature conventional dendritic cell | 9.63e-10 | 5 |
common dendritic progenitor | 9.63e-10 | 5 |
hematopoietic oligopotent progenitor cell | 3.00e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.00e-08 | 161 |
hematopoietic stem cell | 9.34e-08 | 168 |
hematopoietic cell | 3.52e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.59e-19 | 76 |
bone element | 2.00e-17 | 82 |
skeletal element | 1.41e-15 | 90 |
immune system | 5.78e-15 | 93 |
hematopoietic system | 5.00e-14 | 98 |
blood island | 5.00e-14 | 98 |
skeletal system | 1.12e-13 | 100 |
hemolymphoid system | 2.06e-12 | 108 |
musculoskeletal system | 8.16e-08 | 167 |
maxillary sinus | 1.20e-07 | 1 |
paranasal sinus | 1.20e-07 | 1 |
vermiform appendix | 6.57e-07 | 1 |
caecum | 6.57e-07 | 1 |
midgut | 6.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.20e-07 | 1 |
maxillary sinus cancer | 1.20e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.