FFCP PHASE1:Hg19::chr10:64575812..64575824,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3239|TSSclassifier=S|UniProt=P11161|association_with_transcript=290bp_to_ENST00000242480_5end|coexpression_cluster_id=C7|description=CAGE_peak_4_at_EGR2_5end|id=chr10:64575812..64575824,-|ontology_enrichment_celltype=CL:0002057!9.53e-26!42;CL:0002194!2.68e-25!63;CL:0000576!2.68e-25!63;CL:0000040!2.68e-25!63;CL:0000559!2.68e-25!63;CL:0002009!4.40e-24!65;CL:0000860!3.05e-23!45;CL:0000839!1.37e-22!70;CL:0000557!4.54e-22!71;CL:0000766!9.40e-21!76;CL:0002087!3.90e-16!119;CL:0002031!4.64e-14!124;CL:0000738!1.26e-12!140;CL:0000763!1.79e-10!112;CL:0000049!1.79e-10!112;CL:0000988!2.12e-08!182;CL:0000037!5.16e-08!172;CL:0000566!5.16e-08!172;CL:0002032!5.94e-08!165;CL:0000837!5.94e-08!165|ontology_enrichment_celltype_v019=CL:0000860;4.99e-73;33!CL:0002057;4.99e-73;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;1.04e-33;48!CL:0000766;1.50e-20;69!CL:0000763;2.18e-11;100!CL:0002087;5.72e-10;104!CL:0000738;8.66e-08;136|ontology_enrichment_celltype_v019_2=CL:0000473,2.35e-63,48;CL:0000234,2.35e-63,48;CL:0000860,1.08e-61,42;CL:0002057,1.08e-61,42;CL:0002194,8.15e-58,59;CL:0000576,8.15e-58,59;CL:0000040,8.15e-58,59;CL:0000559,8.15e-58,59;CL:0002009,9.54e-56,61;CL:0000839,4.07e-51,66;CL:0000557,2.84e-50,67;CL:0000766,2.13e-46,72;CL:0002087,8.33e-34,115;CL:0002031,3.96e-32,120;CL:0000763,5.50e-29,108;CL:0000049,5.50e-29,108;CL:0000738,1.39e-27,136;CL:0002032,2.81e-22,161;CL:0000837,2.81e-22,161;CL:0000988,3.33e-21,177;CL:0000037,4.50e-21,168;CL:0000134,2.25e-10,354;CL:0002320,4.99e-10,361;CL:0000219,1.30e-09,386;CL:0000048,5.01e-08,427;CL:0000723,8.26e-08,433;CL:0000034,1.58e-07,441|ontology_enrichment_development_v019=CL:0002057;7.39e-46;42!CL:0000049;2.57e-10;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.60e-18!102;UBERON:0003061!3.60e-18!102;UBERON:0002371!5.24e-18!80;UBERON:0002193!6.68e-18!112;UBERON:0001474!8.41e-16!86;UBERON:0002405!5.53e-14!115;UBERON:0004765!3.36e-13!101;UBERON:0001434!3.36e-13!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-43,76;UBERON:0001474,4.78e-40,82;UBERON:0004765,5.70e-36,90;UBERON:0002390,4.09e-35,98;UBERON:0003061,4.09e-35,98;UBERON:0002405,1.28e-34,93;UBERON:0001434,2.92e-34,100;UBERON:0002193,2.68e-31,108;UBERON:0002204,1.64e-19,167;UBERON:0003081,3.08e-16,203;UBERON:0000926,1.37e-10,315;UBERON:0004120,1.37e-10,315;UBERON:0006603,1.37e-10,315;UBERON:0002384,1.48e-09,371|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98674854944673,1.72411237844886,2.12519109546934,0,0,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0,0,0,0,0.290796477559129,0.377875943688809,0.485168122375632,5.11343881192506,6.57868620834921,6.19412741790207,23.5907761704163,12.2957139133968,7.80391358632331,1.72372840368309,0.645484683583826,1.35426486594342,1.88242339542605,3.0019676506363,2.02251136000576,2.75475503133812,1.92557416245656,1.27867425159808,3.62836430205388,1.99463657621632,1.27867425159808,1.16083695451434,2.26954089876456,1.86846674698672,13.5674279238641,12.5155900420848,7.60160956467908,1.81619850790011,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0.486634870302636,0.189069634328136,0,0.175669571386252,0.0654895377488563,0,0,0,1.0447784237956,3.32394901297163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.891786973732369,0,0,0,0.0895585227028483,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,0.502257091432126,8.43335757932127,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,1.05553817648832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3239 | |||
|TSSclassifier=S | |||
|UniProt=P11161 | |||
|association_with_transcript=290bp_to_ENST00000242480_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_4_at_EGR2_5end | |||
|id=chr10:64575812..64575824,- | |||
|ontology_enrichment_celltype=CL:0002057!9.53e-26!42;CL:0002194!2.68e-25!63;CL:0000576!2.68e-25!63;CL:0000040!2.68e-25!63;CL:0000559!2.68e-25!63;CL:0002009!4.40e-24!65;CL:0000860!3.05e-23!45;CL:0000839!1.37e-22!70;CL:0000557!4.54e-22!71;CL:0000766!9.40e-21!76;CL:0002087!3.90e-16!119;CL:0002031!4.64e-14!124;CL:0000738!1.26e-12!140;CL:0000763!1.79e-10!112;CL:0000049!1.79e-10!112;CL:0000988!2.12e-08!182;CL:0000037!5.16e-08!172;CL:0000566!5.16e-08!172;CL:0002032!5.94e-08!165;CL:0000837!5.94e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.99e-73;33!CL:0002057;4.99e-73;33!CL:0000473;1.58e-59;39!CL:0000234;1.58e-59;39!CL:0000576;1.04e-33;48!CL:0000766;1.50e-20;69!CL:0000763;2.18e-11;100!CL:0002087;5.72e-10;104!CL:0000738;8.66e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.35e-63,48;CL:0000234,2.35e-63,48;CL:0000860,1.08e-61,42;CL:0002057,1.08e-61,42;CL:0002194,8.15e-58,59;CL:0000576,8.15e-58,59;CL:0000040,8.15e-58,59;CL:0000559,8.15e-58,59;CL:0002009,9.54e-56,61;CL:0000839,4.07e-51,66;CL:0000557,2.84e-50,67;CL:0000766,2.13e-46,72;CL:0002087,8.33e-34,115;CL:0002031,3.96e-32,120;CL:0000763,5.50e-29,108;CL:0000049,5.50e-29,108;CL:0000738,1.39e-27,136;CL:0002032,2.81e-22,161;CL:0000837,2.81e-22,161;CL:0000988,3.33e-21,177;CL:0000037,4.50e-21,168;CL:0000134,2.25e-10,354;CL:0002320,4.99e-10,361;CL:0000219,1.30e-09,386;CL:0000048,5.01e-08,427;CL:0000723,8.26e-08,433;CL:0000034,1.58e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.39e-46;42!CL:0000049;2.57e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.60e-18!102;UBERON:0003061!3.60e-18!102;UBERON:0002371!5.24e-18!80;UBERON:0002193!6.68e-18!112;UBERON:0001474!8.41e-16!86;UBERON:0002405!5.53e-14!115;UBERON:0004765!3.36e-13!101;UBERON:0001434!3.36e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.17e-43,76;UBERON:0001474,4.78e-40,82;UBERON:0004765,5.70e-36,90;UBERON:0002390,4.09e-35,98;UBERON:0003061,4.09e-35,98;UBERON:0002405,1.28e-34,93;UBERON:0001434,2.92e-34,100;UBERON:0002193,2.68e-31,108;UBERON:0002204,1.64e-19,167;UBERON:0003081,3.08e-16,203;UBERON:0000926,1.37e-10,315;UBERON:0004120,1.37e-10,315;UBERON:0006603,1.37e-10,315;UBERON:0002384,1.48e-09,371 | |||
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|short_description=p4@EGR2 | |||
}} |
Revision as of 13:57, 10 September 2013
Short description: | p4@EGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_EGR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 290bp_to_ENST00000242480_5end |
EntrezGene: | EGR2 |
HGNC: | 3239 |
UniProt: | P11161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.35e-63 | 48 |
phagocyte | 2.35e-63 | 48 |
classical monocyte | 1.08e-61 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.08e-61 | 42 |
monopoietic cell | 8.15e-58 | 59 |
monocyte | 8.15e-58 | 59 |
monoblast | 8.15e-58 | 59 |
promonocyte | 8.15e-58 | 59 |
macrophage dendritic cell progenitor | 9.54e-56 | 61 |
myeloid lineage restricted progenitor cell | 4.07e-51 | 66 |
granulocyte monocyte progenitor cell | 2.84e-50 | 67 |
myeloid leukocyte | 2.13e-46 | 72 |
nongranular leukocyte | 8.33e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 3.96e-32 | 120 |
myeloid cell | 5.50e-29 | 108 |
common myeloid progenitor | 5.50e-29 | 108 |
leukocyte | 1.39e-27 | 136 |
hematopoietic oligopotent progenitor cell | 2.81e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.81e-22 | 161 |
hematopoietic cell | 3.33e-21 | 177 |
hematopoietic stem cell | 4.50e-21 | 168 |
mesenchymal cell | 2.25e-10 | 354 |
connective tissue cell | 4.99e-10 | 361 |
motile cell | 1.30e-09 | 386 |
multi fate stem cell | 5.01e-08 | 427 |
somatic stem cell | 8.26e-08 | 433 |
stem cell | 1.58e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.17e-43 | 76 |
bone element | 4.78e-40 | 82 |
skeletal element | 5.70e-36 | 90 |
hematopoietic system | 4.09e-35 | 98 |
blood island | 4.09e-35 | 98 |
immune system | 1.28e-34 | 93 |
skeletal system | 2.92e-34 | 100 |
hemolymphoid system | 2.68e-31 | 108 |
musculoskeletal system | 1.64e-19 | 167 |
lateral plate mesoderm | 3.08e-16 | 203 |
mesoderm | 1.37e-10 | 315 |
mesoderm-derived structure | 1.37e-10 | 315 |
presumptive mesoderm | 1.37e-10 | 315 |
connective tissue | 1.48e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.