FFCP PHASE1:Hg19::chr10:62492581..62492592,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C22|description=CAGE_peak_at_chr10:62492581..62492592,+|id=chr10:62492581..62492592,+|ontology_enrichment_celltype=CL:0000791!5.18e-16!18;CL:0000789!5.18e-16!18;CL:0002420!5.18e-16!18;CL:0002419!5.18e-16!18;CL:0000790!5.18e-16!18;CL:0000084!1.20e-10!25;CL:0000827!1.20e-10!25;CL:0000624!4.60e-10!6;CL:0000625!3.46e-09!11;CL:0000838!1.97e-08!52;CL:0000542!3.44e-08!53;CL:0000051!3.44e-08!53;CL:0000623!4.18e-08!3;CL:0000825!4.18e-08!3;CL:0000738!8.39e-07!140|ontology_enrichment_celltype_v019=CL:0000623;2.67e-35;3!CL:0000624;8.29e-32;6!CL:0000791;2.38e-16;18!CL:0000789;2.38e-16;18!CL:0002419;2.38e-16;18!CL:0000895;1.82e-13;1!CL:0000084;9.24e-12;25!CL:0000542;2.29e-09;53!CL:0000771;4.04e-07;2|ontology_enrichment_celltype_v019_2=CL:0000623,2.85e-35,3;CL:0000825,2.85e-35,3;CL:0000624,6.06e-32,6;CL:0000838,3.41e-17,52;CL:0000542,7.53e-17,53;CL:0000051,7.53e-17,53;CL:0000791,2.42e-16,18;CL:0000789,2.42e-16,18;CL:0002420,2.42e-16,18;CL:0002419,2.42e-16,18;CL:0000790,2.42e-16,18;CL:0000810,1.82e-13,1;CL:0000895,1.82e-13,1;CL:0002436,1.82e-13,1;CL:0002427,1.82e-13,1;CL:0002428,1.82e-13,1;CL:0002429,1.82e-13,1;CL:0002433,1.82e-13,1;CL:0002431,1.82e-13,1;CL:0002432,1.82e-13,1;CL:0000084,9.35e-12,25;CL:0000827,9.35e-12,25;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:0000738,2.88e-07,136;CL:0002087,4.15e-07,115;CL:0000771,4.17e-07,2;CL:0002031,9.08e-07,120|ontology_enrichment_development_v019=CL:0000790;2.38e-16;18!CL:0002427;1.82e-13;1!CL:0000051;2.29e-09;53!CL:0002425;2.28e-07;2!UBERON:0007297;4.04e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006947!1.03e-07!3;UBERON:0004054!1.03e-07!3|ontology_enrichment_uberon_v019=UBERON:0001301;5.70e-13;1!UBERON:0000007;4.04e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.76e-13,1;UBERON:0000007,4.69e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,0,0,0.560508562981536,0,4.13090517239049,1.96505381374582,1.23360899399706,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0.889719378972363,0.802622484269139,2.09071047609954,0.339928028092699,3.06576394881537,2.06176467289578,1.51811815211702,0.637130828648193,0.651083453856419,0,0,0.511946444617674,0,0.236777252044017,0,0.604820229674197,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.50939302401662,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930053882193542,0.327130788511688,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.682986574053893,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0.730336388246517,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.318235791390825,0,0,0,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0|short_description=p@chr10:62492581..62492592,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_at_chr10:62492581..62492592,+ | |||
|id=chr10:62492581..62492592,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.18e-16!18;CL:0000789!5.18e-16!18;CL:0002420!5.18e-16!18;CL:0002419!5.18e-16!18;CL:0000790!5.18e-16!18;CL:0000084!1.20e-10!25;CL:0000827!1.20e-10!25;CL:0000624!4.60e-10!6;CL:0000625!3.46e-09!11;CL:0000838!1.97e-08!52;CL:0000542!3.44e-08!53;CL:0000051!3.44e-08!53;CL:0000623!4.18e-08!3;CL:0000825!4.18e-08!3;CL:0000738!8.39e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.67e-35;3!CL:0000624;8.29e-32;6!CL:0000791;2.38e-16;18!CL:0000789;2.38e-16;18!CL:0002419;2.38e-16;18!CL:0000895;1.82e-13;1!CL:0000084;9.24e-12;25!CL:0000542;2.29e-09;53!CL:0000771;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.85e-35,3;CL:0000825,2.85e-35,3;CL:0000624,6.06e-32,6;CL:0000838,3.41e-17,52;CL:0000542,7.53e-17,53;CL:0000051,7.53e-17,53;CL:0000791,2.42e-16,18;CL:0000789,2.42e-16,18;CL:0002420,2.42e-16,18;CL:0002419,2.42e-16,18;CL:0000790,2.42e-16,18;CL:0000810,1.82e-13,1;CL:0000895,1.82e-13,1;CL:0002436,1.82e-13,1;CL:0002427,1.82e-13,1;CL:0002428,1.82e-13,1;CL:0002429,1.82e-13,1;CL:0002433,1.82e-13,1;CL:0002431,1.82e-13,1;CL:0002432,1.82e-13,1;CL:0000084,9.35e-12,25;CL:0000827,9.35e-12,25;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:0000738,2.88e-07,136;CL:0002087,4.15e-07,115;CL:0000771,4.17e-07,2;CL:0002031,9.08e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;2.38e-16;18!CL:0002427;1.82e-13;1!CL:0000051;2.29e-09;53!CL:0002425;2.28e-07;2!UBERON:0007297;4.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.03e-07!3;UBERON:0004054!1.03e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.70e-13;1!UBERON:0000007;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.76e-13,1;UBERON:0000007,4.69e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.464448369948228,0,0.30120591877825,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,0,0,0.560508562981536,0,4.13090517239049,1.96505381374582,1.23360899399706,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0.889719378972363,0.802622484269139,2.09071047609954,0.339928028092699,3.06576394881537,2.06176467289578,1.51811815211702,0.637130828648193,0.651083453856419,0,0,0.511946444617674,0,0.236777252044017,0,0.604820229674197,0.534880391567015,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.50939302401662,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.57254001417827,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0,0.144090417154106,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.930053882193542,0.327130788511688,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21393120847326,0.682986574053893,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0.730336388246517,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0.318235791390825,0,0,0,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr10:62492581..62492592,+ | |||
}} |
Revision as of 13:50, 10 September 2013
Short description: | p@chr10:62492581..62492592, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:62492581..62492592, + |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 3.76e-13 | 1 |
pituitary gland | 4.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.