FFCP PHASE1:Hg19::chr10:6066253..6066277,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3030|description=CAGE_peak_at_chr10:6066253..6066277,+|id=chr10:6066253..6066277,+|ontology_enrichment_celltype=CL:0000080!9.78e-22!6;CL:0000815!3.16e-11!2;CL:0000792!3.16e-11!2;CL:0002677!3.16e-11!2;CL:0000988!1.96e-09!182;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000738!1.62e-08!140;CL:0000624!4.09e-08!6;CL:0000838!7.01e-08!52;CL:0000898!9.23e-08!3;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53;CL:0000842!1.63e-07!3;CL:0002087!3.23e-07!119;CL:0000037!4.26e-07!172;CL:0000566!4.26e-07!172;CL:0002031!8.79e-07!124|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060058!1.64e-08!10|ontology_enrichment_disease_v019=DOID:0060060;5.71e-21;1!DOID:0060061;5.71e-21;1!DOID:8691;5.71e-21;1!DOID:0060058;7.22e-09;10|ontology_enrichment_disease_v019_2=DOID:0060060,5.16e-21,1;DOID:0060061,5.16e-21,1;DOID:8691,5.16e-21,1;DOID:0060058,7.07e-09,10|ontology_enrichment_uberon=UBERON:0000178!2.83e-16!15;UBERON:0000179!2.83e-16!15;UBERON:0000463!2.83e-16!15;UBERON:0002193!4.00e-09!112;UBERON:0002390!8.39e-08!102;UBERON:0003061!8.39e-08!102|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-21;15!UBERON:0000179;1.21e-21;15!UBERON:0000463;1.21e-21;15!UBERON:0002331;1.04e-18;10!UBERON:0002390;7.69e-10;32!UBERON:0000478;3.59e-08;24|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-21,15;UBERON:0000179,1.28e-21,15;UBERON:0000463,1.28e-21,15;UBERON:0002331,1.07e-18,10;UBERON:0000358,1.07e-18,10;UBERON:0000307,1.07e-18,10;UBERON:0000091,1.07e-18,10;UBERON:0000087,1.07e-18,10;UBERON:0007010,1.07e-18,10;UBERON:0007806,1.07e-18,10;UBERON:0008780,1.07e-18,10;UBERON:0005728,1.07e-18,10;UBERON:0000478,3.63e-08,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,1.5046784585161,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,0.221533894583621,0.270803863765016,6.91693126518646,8.58391693895196,0.822189523018381,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45474491260183,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,8.27878390941569,10.7554607990619,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.39984875025916,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:6066253..6066277,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3030 | |||
|description=CAGE_peak_at_chr10:6066253..6066277,+ | |||
|id=chr10:6066253..6066277,+ | |||
|ontology_enrichment_celltype=CL:0000080!9.78e-22!6;CL:0000815!3.16e-11!2;CL:0000792!3.16e-11!2;CL:0002677!3.16e-11!2;CL:0000988!1.96e-09!182;CL:0000084!2.91e-09!25;CL:0000827!2.91e-09!25;CL:0000738!1.62e-08!140;CL:0000624!4.09e-08!6;CL:0000838!7.01e-08!52;CL:0000898!9.23e-08!3;CL:0000542!1.07e-07!53;CL:0000051!1.07e-07!53;CL:0000842!1.63e-07!3;CL:0002087!3.23e-07!119;CL:0000037!4.26e-07!172;CL:0000566!4.26e-07!172;CL:0002031!8.79e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!1.64e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.71e-21;1!DOID:0060061;5.71e-21;1!DOID:8691;5.71e-21;1!DOID:0060058;7.22e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.16e-21,1;DOID:0060061,5.16e-21,1;DOID:8691,5.16e-21,1;DOID:0060058,7.07e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.83e-16!15;UBERON:0000179!2.83e-16!15;UBERON:0000463!2.83e-16!15;UBERON:0002193!4.00e-09!112;UBERON:0002390!8.39e-08!102;UBERON:0003061!8.39e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-21;15!UBERON:0000179;1.21e-21;15!UBERON:0000463;1.21e-21;15!UBERON:0002331;1.04e-18;10!UBERON:0002390;7.69e-10;32!UBERON:0000478;3.59e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.28e-21,15;UBERON:0000179,1.28e-21,15;UBERON:0000463,1.28e-21,15;UBERON:0002331,1.07e-18,10;UBERON:0000358,1.07e-18,10;UBERON:0000307,1.07e-18,10;UBERON:0000091,1.07e-18,10;UBERON:0000087,1.07e-18,10;UBERON:0007010,1.07e-18,10;UBERON:0007806,1.07e-18,10;UBERON:0008780,1.07e-18,10;UBERON:0005728,1.07e-18,10;UBERON:0000478,3.63e-08,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,1.5046784585161,0.32592226663359,0.473447805734733,0,1.44833593950726,0.589211814949674,0.221533894583621,0.270803863765016,6.91693126518646,8.58391693895196,0.822189523018381,0.829050053357545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0.561594356226918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45474491260183,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44781693020933,8.27878390941569,10.7554607990619,0,0,0,0.182454789215666,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,2.39984875025916,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:6066253..6066277,+ | |||
}} |
Revision as of 13:44, 10 September 2013
Short description: | p@chr10:6066253..6066277, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:6066253..6066277, + |
Coexpression cluster: | C3030_cord_CD4_mycosis_adult_anaplastic_hairy_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.28e-21 | 15 |
haemolymphatic fluid | 1.28e-21 | 15 |
organism substance | 1.28e-21 | 15 |
umbilical cord | 1.07e-18 | 10 |
blastocyst | 1.07e-18 | 10 |
blastula | 1.07e-18 | 10 |
bilaminar disc | 1.07e-18 | 10 |
inner cell mass | 1.07e-18 | 10 |
cleaving embryo | 1.07e-18 | 10 |
connecting stalk | 1.07e-18 | 10 |
inner cell mass derived epiblast | 1.07e-18 | 10 |
extraembryonic mesoderm | 1.07e-18 | 10 |
extraembryonic structure | 3.63e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.16e-21 | 1 |
cutaneous T cell lymphoma | 5.16e-21 | 1 |
mycosis fungoides | 5.16e-21 | 1 |
lymphoma | 7.07e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.