FFCP PHASE1:Hg19::chr10:49893321..49893329,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57705|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=29323|TSSclassifier=W|UniProt=Q6ZS81|association_with_transcript=-188bp_to_NM_020945,uc001jha.3_5end|coexpression_cluster_id=C314|description=CAGE_peak_8_at_WDFY4_5end|id=chr10:49893321..49893329,+|ontology_enrichment_celltype=CL:0002057!3.68e-40!42;CL:0002009!5.75e-39!65;CL:0002194!1.75e-37!63;CL:0000576!1.75e-37!63;CL:0000040!1.75e-37!63;CL:0000559!1.75e-37!63;CL:0002032!4.04e-37!165;CL:0000837!4.04e-37!165;CL:0000860!4.85e-37!45;CL:0000037!3.83e-35!172;CL:0000566!3.83e-35!172;CL:0000557!4.92e-35!71;CL:0002031!6.29e-35!124;CL:0002087!1.11e-34!119;CL:0000763!6.00e-34!112;CL:0000049!6.00e-34!112;CL:0000839!5.28e-33!70;CL:0000988!1.40e-32!182;CL:0000766!4.74e-32!76;CL:0000738!1.71e-31!140;CL:0000134!1.15e-11!358;CL:0002320!3.19e-11!365;CL:0000945!3.53e-11!24;CL:0000826!3.53e-11!24;CL:0000840!7.66e-10!5;CL:0001029!7.66e-10!5;CL:0000219!1.17e-09!390;CL:0000048!8.40e-08!430;CL:0000034!8.68e-08!444;CL:0000723!1.54e-07!436|ontology_enrichment_celltype_v019=CL:0000473;1.10e-26;39!CL:0000234;1.10e-26;39!CL:0000860;1.87e-22;33!CL:0002057;1.87e-22;33!CL:0000840;1.71e-19;5!CL:0000576;7.30e-14;48!CL:0000990;3.30e-13;8!CL:0000451;6.52e-11;10!CL:0000235;1.91e-09;6!CL:0000766;3.27e-09;69|ontology_enrichment_celltype_v019_2=CL:0002194,2.40e-33,59;CL:0000576,2.40e-33,59;CL:0000040,2.40e-33,59;CL:0000559,2.40e-33,59;CL:0002009,3.17e-32,61;CL:0000839,1.03e-29,66;CL:0000557,2.96e-29,67;CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0000766,3.76e-27,72;CL:0000473,1.52e-24,48;CL:0000234,1.52e-24,48;CL:0000840,1.33e-19,5;CL:0001029,1.33e-19,5;CL:0000860,6.38e-18,42;CL:0002057,6.38e-18,42;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0002087,1.61e-16,115;CL:0000988,3.76e-16,177;CL:0002031,9.03e-16,120;CL:0000738,9.69e-14,136;CL:0000990,2.80e-13,8;CL:0000451,5.70e-11,10;CL:0000235,1.91e-09,6;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361|ontology_enrichment_development_v019=CL:0002057;2.38e-14;42!CL:0000049;3.93e-09;108|ontology_enrichment_disease=DOID:0060058!1.55e-07!10;DOID:74!3.62e-07!2|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!3.11e-30!80;UBERON:0002390!3.73e-29!102;UBERON:0003061!3.73e-29!102;UBERON:0001474!1.37e-27!86;UBERON:0002193!1.62e-27!112;UBERON:0002405!8.42e-25!115;UBERON:0004765!4.66e-24!101;UBERON:0001434!4.66e-24!101;UBERON:0002204!1.78e-11!167;UBERON:0002384!1.29e-10!375;UBERON:0003081!4.04e-10!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-25,76;UBERON:0001474,1.06e-23,82;UBERON:0004765,1.75e-21,90;UBERON:0002405,9.47e-21,93;UBERON:0002390,1.27e-19,98;UBERON:0003061,1.27e-19,98;UBERON:0001434,3.32e-19,100;UBERON:0002193,1.11e-17,108;UBERON:0002204,6.72e-11,167;UBERON:0003081,1.13e-08,203;UBERON:0002384,9.92e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.472264687882075,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.710846162437108,0,0,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0.755751887377619,1.21292030593908,0.232429036905685,1.23350366406548,2.47765096716083,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0.564727018627814,1.09162460023138,0.898893937780338,0.612167784741805,1.28371610830437,0.639337125799041,0,0,0,0,0,0.622822248995575,0.75374599577023,2.60741459210101,1.08594422352558,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24547393654683,5.57215159357655,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91408956792399,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1974762285969,0.191505370132367,4.86849240264931,0.324621940274555,0.280797178113459,2.51058146936511,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0|short_description=p8@WDFY4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=57705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29323 | |||
|TSSclassifier=W | |||
|UniProt=Q6ZS81 | |||
|association_with_transcript=-188bp_to_NM_020945,uc001jha.3_5end | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_8_at_WDFY4_5end | |||
|id=chr10:49893321..49893329,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.68e-40!42;CL:0002009!5.75e-39!65;CL:0002194!1.75e-37!63;CL:0000576!1.75e-37!63;CL:0000040!1.75e-37!63;CL:0000559!1.75e-37!63;CL:0002032!4.04e-37!165;CL:0000837!4.04e-37!165;CL:0000860!4.85e-37!45;CL:0000037!3.83e-35!172;CL:0000566!3.83e-35!172;CL:0000557!4.92e-35!71;CL:0002031!6.29e-35!124;CL:0002087!1.11e-34!119;CL:0000763!6.00e-34!112;CL:0000049!6.00e-34!112;CL:0000839!5.28e-33!70;CL:0000988!1.40e-32!182;CL:0000766!4.74e-32!76;CL:0000738!1.71e-31!140;CL:0000134!1.15e-11!358;CL:0002320!3.19e-11!365;CL:0000945!3.53e-11!24;CL:0000826!3.53e-11!24;CL:0000840!7.66e-10!5;CL:0001029!7.66e-10!5;CL:0000219!1.17e-09!390;CL:0000048!8.40e-08!430;CL:0000034!8.68e-08!444;CL:0000723!1.54e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.10e-26;39!CL:0000234;1.10e-26;39!CL:0000860;1.87e-22;33!CL:0002057;1.87e-22;33!CL:0000840;1.71e-19;5!CL:0000576;7.30e-14;48!CL:0000990;3.30e-13;8!CL:0000451;6.52e-11;10!CL:0000235;1.91e-09;6!CL:0000766;3.27e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.40e-33,59;CL:0000576,2.40e-33,59;CL:0000040,2.40e-33,59;CL:0000559,2.40e-33,59;CL:0002009,3.17e-32,61;CL:0000839,1.03e-29,66;CL:0000557,2.96e-29,67;CL:0000763,1.91e-27,108;CL:0000049,1.91e-27,108;CL:0000766,3.76e-27,72;CL:0000473,1.52e-24,48;CL:0000234,1.52e-24,48;CL:0000840,1.33e-19,5;CL:0001029,1.33e-19,5;CL:0000860,6.38e-18,42;CL:0002057,6.38e-18,42;CL:0002032,6.43e-18,161;CL:0000837,6.43e-18,161;CL:0000037,4.19e-17,168;CL:0002087,1.61e-16,115;CL:0000988,3.76e-16,177;CL:0002031,9.03e-16,120;CL:0000738,9.69e-14,136;CL:0000990,2.80e-13,8;CL:0000451,5.70e-11,10;CL:0000235,1.91e-09,6;CL:0000134,3.77e-07,354;CL:0002320,5.67e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.38e-14;42!CL:0000049;3.93e-09;108 | |||
|ontology_enrichment_disease=DOID:0060058!1.55e-07!10;DOID:74!3.62e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.11e-30!80;UBERON:0002390!3.73e-29!102;UBERON:0003061!3.73e-29!102;UBERON:0001474!1.37e-27!86;UBERON:0002193!1.62e-27!112;UBERON:0002405!8.42e-25!115;UBERON:0004765!4.66e-24!101;UBERON:0001434!4.66e-24!101;UBERON:0002204!1.78e-11!167;UBERON:0002384!1.29e-10!375;UBERON:0003081!4.04e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.16e-25,76;UBERON:0001474,1.06e-23,82;UBERON:0004765,1.75e-21,90;UBERON:0002405,9.47e-21,93;UBERON:0002390,1.27e-19,98;UBERON:0003061,1.27e-19,98;UBERON:0001434,3.32e-19,100;UBERON:0002193,1.11e-17,108;UBERON:0002204,6.72e-11,167;UBERON:0003081,1.13e-08,203;UBERON:0002384,9.92e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.472264687882075,0,0,0.154816123316076,0,0,0,0.0774672005803016,0.710846162437108,0,0,0.601633342410425,0.651032612147555,0,0,0,0.145398238779565,0.755751887377619,1.21292030593908,0.232429036905685,1.23350366406548,2.47765096716083,0,0.256160706529101,0.709446689665756,0.344745680736619,1.29096936716765,0,0.564727018627814,1.09162460023138,0.898893937780338,0.612167784741805,1.28371610830437,0.639337125799041,0,0,0,0,0,0.622822248995575,0.75374599577023,2.60741459210101,1.08594422352558,0,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24547393654683,5.57215159357655,1.99436940778298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91408956792399,3.12125440806329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1974762285969,0.191505370132367,4.86849240264931,0.324621940274555,0.280797178113459,2.51058146936511,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p8@WDFY4 | |||
}} |
Revision as of 13:33, 10 September 2013
Short description: | p8@WDFY4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_WDFY4_5end |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | -188bp_to_NM_020945, uc001jha.3_5end |
EntrezGene: | WDFY4 |
HGNC: | 29323 |
UniProt: | Q6ZS81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.40e-33 | 59 |
monocyte | 2.40e-33 | 59 |
monoblast | 2.40e-33 | 59 |
promonocyte | 2.40e-33 | 59 |
macrophage dendritic cell progenitor | 3.17e-32 | 61 |
myeloid lineage restricted progenitor cell | 1.03e-29 | 66 |
granulocyte monocyte progenitor cell | 2.96e-29 | 67 |
myeloid cell | 1.91e-27 | 108 |
common myeloid progenitor | 1.91e-27 | 108 |
myeloid leukocyte | 3.76e-27 | 72 |
defensive cell | 1.52e-24 | 48 |
phagocyte | 1.52e-24 | 48 |
immature conventional dendritic cell | 1.33e-19 | 5 |
common dendritic progenitor | 1.33e-19 | 5 |
classical monocyte | 6.38e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.38e-18 | 42 |
hematopoietic oligopotent progenitor cell | 6.43e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-18 | 161 |
hematopoietic stem cell | 4.19e-17 | 168 |
nongranular leukocyte | 1.61e-16 | 115 |
hematopoietic cell | 3.76e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 9.03e-16 | 120 |
leukocyte | 9.69e-14 | 136 |
conventional dendritic cell | 2.80e-13 | 8 |
dendritic cell | 5.70e-11 | 10 |
macrophage | 1.91e-09 | 6 |
mesenchymal cell | 3.77e-07 | 354 |
connective tissue cell | 5.67e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.16e-25 | 76 |
bone element | 1.06e-23 | 82 |
skeletal element | 1.75e-21 | 90 |
immune system | 9.47e-21 | 93 |
hematopoietic system | 1.27e-19 | 98 |
blood island | 1.27e-19 | 98 |
skeletal system | 3.32e-19 | 100 |
hemolymphoid system | 1.11e-17 | 108 |
musculoskeletal system | 6.72e-11 | 167 |
lateral plate mesoderm | 1.13e-08 | 203 |
connective tissue | 9.92e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.