FFCP PHASE1:Hg19::chr10:33277827..33277833,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:33277827..33277833,+|id=chr10:33277827..33277833,+|ontology_enrichment_celltype=CL:0000066!3.61e-09!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;9.72e-14;1|ontology_enrichment_disease=DOID:14566!9.62e-11!239;DOID:162!1.31e-09!235;DOID:0050687!1.31e-09!143;DOID:2394!3.00e-09!14;DOID:305!3.24e-08!106;DOID:120!8.26e-07!27|ontology_enrichment_disease_v019=DOID:2394;1.49e-08;14!DOID:120;1.36e-07;27!DOID:4468;1.64e-07;2!DOID:193;4.42e-07;29|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-08,14;DOID:120,1.52e-07,27;DOID:4468,2.40e-07,2;DOID:193,4.88e-07,29|ontology_enrichment_uberon=UBERON:0002294!7.42e-08!7;UBERON:0001173!7.42e-08!7;UBERON:0004912!7.42e-08!7|ontology_enrichment_uberon_v019=UBERON:0000941;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0.219500570817251,0,0.402115889646523,0.370353780634118,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.577332676353072,0.670302275535787,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.918893600827838,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,2.00355669041231,0,0.422250816255987,0.19924798825107,0,0,0.306806047506464,0,0,0.269605053441981,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0,0.0821154570532092,0,0.176512253383001,0,1.50746117111426,0.794858446811959,0,0.195551382734803,0.240476460754601,0.213452994739353,0,0,0,0.171594997861965,0.288109595976299,0.248505071130865,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,4.44825778499256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0.477890301491107,0.899606224327209,0.155262956876259,0,0,1.5652351854352,0.601030435988874,1.14241563650639,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,1.19428766609585,0,0.343395705182793,0,0,0.57785949122191,0.214441591374926,0,0,0,0,0.537266523244462,0,0,0.706756583783524,0,0.506827321959218,0.256241518587947,0,0.303859956177382,0,0,0,0.163565394255844,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.490738592505128,0.11796972334774,0,0,0,0,0,0,0.60511520611056,0,0,0,0.443568258651136,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53651993149159,0.889851215136553,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0.709992004383392,1.10777426186905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0|short_description=p@chr10:33277827..33277833,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:33277827..33277833,+ | |||
|id=chr10:33277827..33277833,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.61e-09!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.72e-14;1 | |||
|ontology_enrichment_disease=DOID:14566!9.62e-11!239;DOID:162!1.31e-09!235;DOID:0050687!1.31e-09!143;DOID:2394!3.00e-09!14;DOID:305!3.24e-08!106;DOID:120!8.26e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.49e-08;14!DOID:120;1.36e-07;27!DOID:4468;1.64e-07;2!DOID:193;4.42e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.49e-08,14;DOID:120,1.52e-07,27;DOID:4468,2.40e-07,2;DOID:193,4.88e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002294!7.42e-08!7;UBERON:0001173!7.42e-08!7;UBERON:0004912!7.42e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.72e-14;1!UBERON:0001785;9.72e-14;1!UBERON:0002464;9.72e-14;1!UBERON:0004904;9.72e-14;1!UBERON:0001021;9.72e-14;1!UBERON:0003714;1.64e-07;2!UBERON:0005162;1.64e-07;2!UBERON:0000122;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.515281080091258,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,0.386521706326594,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,2.94848165003288,0,0,0,0,0.219500570817251,0,0.402115889646523,0.370353780634118,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.499864955910285,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0.145016693914229,0,0,0,0.576570202095319,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,0,0,0.379473173765715,0,0.577332676353072,0.670302275535787,1.08890984861323,0.0941438007767792,0,1.68471475667626,0.443430153536676,0.918893600827838,0,0.764637207142375,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0.140669416410513,2.00355669041231,0,0.422250816255987,0.19924798825107,0,0,0.306806047506464,0,0,0.269605053441981,1.9692329214317,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0.295547618953547,0,0.21787692703798,0,0,0.227884111694002,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0,0,0,0.0821154570532092,0,0.176512253383001,0,1.50746117111426,0.794858446811959,0,0.195551382734803,0.240476460754601,0.213452994739353,0,0,0,0.171594997861965,0.288109595976299,0.248505071130865,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0.105600336519406,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0.113312091520126,0.146552233678082,0,0.129282956361551,0,4.44825778499256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.295710299979268,0.477890301491107,0.899606224327209,0.155262956876259,0,0,1.5652351854352,0.601030435988874,1.14241563650639,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,1.19428766609585,0,0.343395705182793,0,0,0.57785949122191,0.214441591374926,0,0,0,0,0.537266523244462,0,0,0.706756583783524,0,0.506827321959218,0.256241518587947,0,0.303859956177382,0,0,0,0.163565394255844,0,0.737318726261158,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.490738592505128,0.11796972334774,0,0,0,0,0,0,0.60511520611056,0,0,0,0.443568258651136,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53651993149159,0.889851215136553,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0,0,0.116241425368125,0,0.801711364730253,0,0,0,0,0.709992004383392,1.10777426186905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.224263725161227,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p@chr10:33277827..33277833,+ | |||
}} |
Revision as of 13:14, 10 September 2013
Short description: | p@chr10:33277827..33277833, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:33277827..33277833, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.73e-14 | 1 |
cranial nerve | 9.73e-14 | 1 |
nerve trunk | 9.73e-14 | 1 |
nerve connecting eye with brain | 9.73e-14 | 1 |
nerve | 9.73e-14 | 1 |
retinal neural layer | 9.73e-14 | 1 |
presumptive neural retina | 9.73e-14 | 1 |
neural tissue | 1.64e-07 | 2 |
multi cell component structure | 1.64e-07 | 2 |
neuron projection bundle | 1.64e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.49e-08 | 14 |
female reproductive organ cancer | 1.52e-07 | 27 |
clear cell adenocarcinoma | 2.40e-07 | 2 |
reproductive organ cancer | 4.88e-07 | 29 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.