FFCP PHASE1:Hg19::chr10:28884887..28884922,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51322|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17327|TSSclassifier=S|UniProt=|association_with_transcript=31bp_to_ENST00000476046_5end|coexpression_cluster_id=C3011|description=CAGE_peak_12_at_WAC_5end|id=chr10:28884887..28884922,+|ontology_enrichment_celltype=CL:0002057!5.41e-07!42|ontology_enrichment_celltype_v019=CL:0000775;7.99e-08;3!CL:0000094;7.01e-07;8|ontology_enrichment_celltype_v019_2=CL:0000775,6.51e-08,3;CL:0000094,6.00e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.31e-15!115;UBERON:0001049!1.87e-11!57;UBERON:0005068!1.87e-11!57;UBERON:0006241!1.87e-11!57;UBERON:0007135!1.87e-11!57;UBERON:0003080!1.32e-10!42;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0002616!1.90e-09!59;UBERON:0000955!4.82e-09!69;UBERON:0006238!4.82e-09!69;UBERON:0001017!7.46e-09!82;UBERON:0002020!1.66e-08!34;UBERON:0003528!1.66e-08!34;UBERON:0005743!4.26e-08!86;UBERON:0000073!6.59e-08!94;UBERON:0001016!6.59e-08!94;UBERON:0002791!1.63e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!4.93e-07!32;UBERON:0002619!5.87e-07!22|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-13;22!UBERON:0001950;7.53e-13;20!UBERON:0003528;1.14e-12;34!UBERON:0002020;1.14e-12;34!UBERON:0002791;9.15e-12;32!UBERON:0001869;9.69e-12;32!UBERON:0000956;1.10e-11;25!UBERON:0000203;1.10e-11;25!UBERON:0002780;3.28e-11;41!UBERON:0001890;3.28e-11;41!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0001893;2.73e-10;34!UBERON:0002021;2.94e-07;5!UBERON:0001017;3.91e-07;75!UBERON:0001016;4.09e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.02e-22,56;UBERON:0005068,3.02e-22,56;UBERON:0006241,3.02e-22,56;UBERON:0007135,3.02e-22,56;UBERON:0000073,1.29e-18,53;UBERON:0002616,1.29e-18,53;UBERON:0003075,1.60e-17,82;UBERON:0007284,1.60e-17,82;UBERON:0002346,2.74e-16,86;UBERON:0003528,7.33e-16,34;UBERON:0002020,7.33e-16,34;UBERON:0002780,1.48e-15,41;UBERON:0001890,1.48e-15,41;UBERON:0003080,1.48e-15,41;UBERON:0006240,1.48e-15,41;UBERON:0001017,3.36e-15,81;UBERON:0007023,8.44e-15,114;UBERON:0000955,4.80e-14,68;UBERON:0006238,4.80e-14,68;UBERON:0001016,5.91e-14,89;UBERON:0002619,9.62e-14,22;UBERON:0002791,3.74e-13,32;UBERON:0001869,3.74e-13,32;UBERON:0010371,5.42e-13,104;UBERON:0001950,6.37e-13,20;UBERON:0001893,3.79e-12,34;UBERON:0000956,9.52e-12,25;UBERON:0000203,9.52e-12,25;UBERON:0010314,6.23e-10,132;UBERON:0003056,8.44e-10,61;UBERON:0003076,5.42e-08,15;UBERON:0003057,5.42e-08,15;UBERON:0002021,1.97e-07,5|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0,0,0,0.975865597581014,0,0,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0.619264493264304,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,0,0.601633342410425,0.434021741431704,0.447830948479849,0.647787332037959,0,0.581592955118259,0.377875943688809,0.727752183563449,2.09186133215116,1.23350366406548,0.929119112685311,0.863077176966451,1.5369642391746,0.945928919554341,2.41321976515633,0,1.35426486594342,0.941211697713023,0.545812300115692,0.449446968890169,1.22433556948361,0.320929027076094,1.91801137739712,1.31940520074686,1.19678194572979,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,1.81619850790011,0.368277635987565,0.949387162322653,0.211255286311942,0,0.209658645508376,0.561643155732475,0.600707571366025,0.32145117339416,0,0.39783335439818,0.365328307529268,0,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,2.27685187643779,0.587237189370939,1.14681968437569,1.32171328579026,0.560508562981536,0,0.786839080455332,2.35806457649499,1.43921049299656,0.334372990781356,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.434473211648397,29.2568239576754,0.670700859703636,0.12786256184353,0,0,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0.261958150995425,0,0,0,0.696518949197069,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,3.87780264148325,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,5.18558332031999,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.515281080091258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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17327 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENST00000476046_5end | |||
|coexpression_cluster_id=C3011 | |||
|description=CAGE_peak_12_at_WAC_5end | |||
|id=chr10:28884887..28884922,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.41e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000775;7.99e-08;3!CL:0000094;7.01e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.51e-08,3;CL:0000094,6.00e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.31e-15!115;UBERON:0001049!1.87e-11!57;UBERON:0005068!1.87e-11!57;UBERON:0006241!1.87e-11!57;UBERON:0007135!1.87e-11!57;UBERON:0003080!1.32e-10!42;UBERON:0002780!3.96e-10!41;UBERON:0001890!3.96e-10!41;UBERON:0006240!3.96e-10!41;UBERON:0002616!1.90e-09!59;UBERON:0000955!4.82e-09!69;UBERON:0006238!4.82e-09!69;UBERON:0001017!7.46e-09!82;UBERON:0002020!1.66e-08!34;UBERON:0003528!1.66e-08!34;UBERON:0005743!4.26e-08!86;UBERON:0000073!6.59e-08!94;UBERON:0001016!6.59e-08!94;UBERON:0002791!1.63e-07!33;UBERON:0001893!2.36e-07!34;UBERON:0001869!4.93e-07!32;UBERON:0002619!5.87e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.14e-13;22!UBERON:0001950;7.53e-13;20!UBERON:0003528;1.14e-12;34!UBERON:0002020;1.14e-12;34!UBERON:0002791;9.15e-12;32!UBERON:0001869;9.69e-12;32!UBERON:0000956;1.10e-11;25!UBERON:0000203;1.10e-11;25!UBERON:0002780;3.28e-11;41!UBERON:0001890;3.28e-11;41!UBERON:0000073;8.61e-11;53!UBERON:0002616;8.61e-11;53!UBERON:0001893;2.73e-10;34!UBERON:0002021;2.94e-07;5!UBERON:0001017;3.91e-07;75!UBERON:0001016;4.09e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.02e-22,56;UBERON:0005068,3.02e-22,56;UBERON:0006241,3.02e-22,56;UBERON:0007135,3.02e-22,56;UBERON:0000073,1.29e-18,53;UBERON:0002616,1.29e-18,53;UBERON:0003075,1.60e-17,82;UBERON:0007284,1.60e-17,82;UBERON:0002346,2.74e-16,86;UBERON:0003528,7.33e-16,34;UBERON:0002020,7.33e-16,34;UBERON:0002780,1.48e-15,41;UBERON:0001890,1.48e-15,41;UBERON:0003080,1.48e-15,41;UBERON:0006240,1.48e-15,41;UBERON:0001017,3.36e-15,81;UBERON:0007023,8.44e-15,114;UBERON:0000955,4.80e-14,68;UBERON:0006238,4.80e-14,68;UBERON:0001016,5.91e-14,89;UBERON:0002619,9.62e-14,22;UBERON:0002791,3.74e-13,32;UBERON:0001869,3.74e-13,32;UBERON:0010371,5.42e-13,104;UBERON:0001950,6.37e-13,20;UBERON:0001893,3.79e-12,34;UBERON:0000956,9.52e-12,25;UBERON:0000203,9.52e-12,25;UBERON:0010314,6.23e-10,132;UBERON:0003056,8.44e-10,61;UBERON:0003076,5.42e-08,15;UBERON:0003057,5.42e-08,15;UBERON:0002021,1.97e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.662794751455832,0,0,0,0.975865597581014,0,0,0,0,0,0.125542639594803,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0.619264493264304,0,0,0,0.154934401160603,0.426507697462265,0.293600439334847,0,0.601633342410425,0.434021741431704,0.447830948479849,0.647787332037959,0,0.581592955118259,0.377875943688809,0.727752183563449,2.09186133215116,1.23350366406548,0.929119112685311,0.863077176966451,1.5369642391746,0.945928919554341,2.41321976515633,0,1.35426486594342,0.941211697713023,0.545812300115692,0.449446968890169,1.22433556948361,0.320929027076094,1.91801137739712,1.31940520074686,1.19678194572979,0.426224750532694,0.870627715885752,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0.434377689410233,1.81619850790011,0.368277635987565,0.949387162322653,0.211255286311942,0,0.209658645508376,0.561643155732475,0.600707571366025,0.32145117339416,0,0.39783335439818,0.365328307529268,0,0,0,0.853460445133014,0.800791974072025,0.574752439954483,0,0,2.27685187643779,0.587237189370939,1.14681968437569,1.32171328579026,0.560508562981536,0,0.786839080455332,2.35806457649499,1.43921049299656,0.334372990781356,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,0,0.113309342697566,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0.236777252044017,0,0.403213486449465,1.60464117470104,0.434473211648397,29.2568239576754,0.670700859703636,0.12786256184353,0,0,0.724232594804119,0,0.486634870302636,0,0,0.175669571386252,0.261958150995425,0,0,0,0.696518949197069,0.398873881556595,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0.446498641420399,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,3.87780264148325,0,0,0.759783069987479,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.151357427644931,5.18558332031999,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.280901613404497,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.515281080091258,0.37223371266318,0,0.292311015483596,0,0.368199594569197,0,0.710019185033229,0.403008392910561,0,0,0,0,0.365921118388786,0.132529768321485,0.348581828608555,0.414644220061482,0.252320850875628,1.45990943630332,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0,0.441175890929576,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,0.245976877086227,0,0.329250856225877,0,0.301586917234893,0.277765335475589,0,0,0,0,0.821860859650752,0.288732895522148,0,0.761016608938393,0.790204397959275,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0,0,0.44024217006613,0,0.144119953416961,0.25248486685276,0.317489471460845,0.381988425558278,0,0,0.514137463516618,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,4.21667878966063,0.479249710983165,1.14861935834114,0,0.434343920002738,0.410952645100767,0.716243852959582,0.672510863961164,0.591092280605782,0.862510299438069,0.898401253958239,0.254094624222463,0,0,0.167516265334349,0.637938751653163,5.99205619157746,17.9496875522415,2.90090859405225,0.49076596687656,1.00034104211935,0.542530047399471,1.66376689224646,0.535286966391485,0.473107245101804,0.234282829985426,0.601892199455438,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0,0.343143423810856,0.206768026122887,1.2942852049117,0.853820462427555,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0.511707249066704,0.64341568457443,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.601519410909855,1.01289087829486,0.229628896329213,0,0.393373244878272,0,0.308061348417659,0.784349769176855,0,0.844413031143006,0,0.170093705276516,1.0795795805107,0,0,0.501689773854853,0,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.457847324091717,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.413509717453592,0.107420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0.165284915360978,0,0.255225424989168,0.6069466851333,0.464845549297286,0,0,0,0,0,0,0.429374660225974,0,0.316379424718726,0.190630193923825,0,8.13084077264449,0.318203247925937,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.876901770507525,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0.633322905892992,0.987884678879706,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0.229723400206959,1.01489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| |||
|short_description=p12@WAC | |||
}} |
Revision as of 13:03, 10 September 2013
Short description: | p12@WAC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_WAC_5end |
Coexpression cluster: | C3011_Cardiac_Neutrophils_Smooth_parietal_occipital_middle_medial |
Association with transcript: | 31bp_to_ENST00000476046_5end |
EntrezGene: | WAC |
HGNC: | 17327 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.51e-08 | 3 |
granulocyte | 6.00e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.02e-22 | 56 |
neural rod | 3.02e-22 | 56 |
future spinal cord | 3.02e-22 | 56 |
neural keel | 3.02e-22 | 56 |
regional part of nervous system | 1.29e-18 | 53 |
regional part of brain | 1.29e-18 | 53 |
neural plate | 1.60e-17 | 82 |
presumptive neural plate | 1.60e-17 | 82 |
neurectoderm | 2.74e-16 | 86 |
brain grey matter | 7.33e-16 | 34 |
gray matter | 7.33e-16 | 34 |
regional part of forebrain | 1.48e-15 | 41 |
forebrain | 1.48e-15 | 41 |
anterior neural tube | 1.48e-15 | 41 |
future forebrain | 1.48e-15 | 41 |
central nervous system | 3.36e-15 | 81 |
adult organism | 8.44e-15 | 114 |
brain | 4.80e-14 | 68 |
future brain | 4.80e-14 | 68 |
nervous system | 5.91e-14 | 89 |
regional part of cerebral cortex | 9.62e-14 | 22 |
regional part of telencephalon | 3.74e-13 | 32 |
cerebral hemisphere | 3.74e-13 | 32 |
ecto-epithelium | 5.42e-13 | 104 |
neocortex | 6.37e-13 | 20 |
telencephalon | 3.79e-12 | 34 |
cerebral cortex | 9.52e-12 | 25 |
pallium | 9.52e-12 | 25 |
structure with developmental contribution from neural crest | 6.23e-10 | 132 |
pre-chordal neural plate | 8.44e-10 | 61 |
posterior neural tube | 5.42e-08 | 15 |
chordal neural plate | 5.42e-08 | 15 |
occipital lobe | 1.97e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.