FFCP PHASE1:Hg19::chr10:14564009..14564018,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83641|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23726|TSSclassifier=W|UniProt=|association_with_transcript=205bp_to_ENST00000475858_5end|description=CAGE_peak_10_at_FAM107B_5end|id=chr10:14564009..14564018,-|ontology_enrichment_celltype=CL:0000738!2.14e-19!140;CL:0002087!2.85e-18!119;CL:0002031!1.36e-17!124;CL:0002032!2.53e-16!165;CL:0000837!2.53e-16!165;CL:0000860!5.24e-16!45;CL:0000037!5.97e-16!172;CL:0000566!5.97e-16!172;CL:0000988!2.11e-15!182;CL:0002057!2.43e-15!42;CL:0000766!7.81e-12!76;CL:0000839!4.21e-11!70;CL:0000557!4.51e-11!71;CL:0002009!1.26e-10!65;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000763!1.91e-09!112;CL:0000049!1.91e-09!112;CL:0000542!2.10e-07!53;CL:0000051!2.10e-07!53;CL:0000838!4.61e-07!52|ontology_enrichment_celltype_v019=CL:0000860;3.87e-51;33!CL:0002057;3.87e-51;33!CL:0000473;2.63e-37;39!CL:0000234;2.63e-37;39!CL:0000576;5.97e-23;48!CL:0000766;1.47e-13;69!CL:0002087;6.39e-11;104!CL:0000763;8.36e-09;100!CL:0000738;1.87e-08;136|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-43,42;CL:0002057,5.63e-43,42;CL:0000473,1.53e-39,48;CL:0000234,1.53e-39,48;CL:0002009,6.70e-31,61;CL:0002194,6.59e-30,59;CL:0000576,6.59e-30,59;CL:0000040,6.59e-30,59;CL:0000559,6.59e-30,59;CL:0002087,1.10e-28,115;CL:0002031,1.29e-28,120;CL:0000557,2.13e-27,67;CL:0000766,5.55e-27,72;CL:0000738,6.91e-27,136;CL:0000839,6.77e-26,66;CL:0002032,1.91e-23,161;CL:0000837,1.91e-23,161;CL:0000037,5.92e-22,168;CL:0000988,3.27e-20,177;CL:0000763,3.98e-19,108;CL:0000049,3.98e-19,108|ontology_enrichment_development_v019=CL:0002057;2.46e-33;42!CL:0000049;3.69e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.10e-10!102;UBERON:0003061!1.10e-10!102;UBERON:0002193!2.87e-10!112;UBERON:0002371!3.56e-09!80;UBERON:0002405!4.87e-08!115;UBERON:0001474!2.52e-07!86;UBERON:0004765!7.86e-07!101;UBERON:0001434!7.86e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-25,76;UBERON:0001474,1.31e-22,82;UBERON:0002405,2.50e-20,93;UBERON:0002390,2.54e-20,98;UBERON:0003061,2.54e-20,98;UBERON:0004765,7.55e-20,90;UBERON:0002193,7.19e-19,108;UBERON:0001434,4.99e-17,100;UBERON:0002204,3.61e-09,167;UBERON:0003081,1.06e-08,203|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0.57470412614962,0.236132343941038,0,0.383829398097213,0.154816123316076,0,0,0,0.852139206383318,1.13735385989937,0,0,0.802177789880567,0,0,0,0.77272670290256,1.59938062657521,2.26725566213286,1.94067248950253,2.32429036905685,3.70051099219643,3.09706370895104,1.7261543539329,3.07392847834921,2.83778675866302,1.03423704220986,1.29096936716765,2.70852973188684,1.88242339542605,2.18324920046277,1.12361742222542,4.28517449319264,0.962787081228281,1.91801137739712,1.9791078011203,1.99463657621632,0.852449501065388,9.57690487474327,2.8369261234557,1.24564449799115,2.76373531782418,5.21482918420201,1.08594422352558,3.02699751316684,2.57794345191295,2.53169909952708,0,0,0,0.22465726229299,0,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,0,0,0,0.786839080455332,1.96505381374582,2.2616164889946,1.00311897234407,0,0,0,0.445641827540694,0,0.443067789167242,0.812411591295047,0.25618263945135,0.390178042679635,0.493313713811028,0.276350017785848,0.289803085735052,0.444859689486181,0,1.04535523804977,0.453237370790265,0.383220493601921,0,0.759059076058509,0.318565414324097,0,0,0.150575119077773,0.511946444617674,0,0.710331756132051,0.821127996921047,0.403213486449465,1.60464117470104,1.15859523106239,0,0,0,0.722878304769133,0,0.289693037921647,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825354125820202,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.446498641420399,0,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0.612975591598039,0.600952235626387,0.226864366320042,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0,0,0,0,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.220587945464788,0,0.474541238222193,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0,0,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0,0,0,0.462985512576611,1.14152491340759,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0.20732811554077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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83641 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=205bp_to_ENST00000475858_5end | |||
|description=CAGE_peak_10_at_FAM107B_5end | |||
|id=chr10:14564009..14564018,- | |||
|ontology_enrichment_celltype=CL:0000738!2.14e-19!140;CL:0002087!2.85e-18!119;CL:0002031!1.36e-17!124;CL:0002032!2.53e-16!165;CL:0000837!2.53e-16!165;CL:0000860!5.24e-16!45;CL:0000037!5.97e-16!172;CL:0000566!5.97e-16!172;CL:0000988!2.11e-15!182;CL:0002057!2.43e-15!42;CL:0000766!7.81e-12!76;CL:0000839!4.21e-11!70;CL:0000557!4.51e-11!71;CL:0002009!1.26e-10!65;CL:0002194!1.43e-10!63;CL:0000576!1.43e-10!63;CL:0000040!1.43e-10!63;CL:0000559!1.43e-10!63;CL:0000763!1.91e-09!112;CL:0000049!1.91e-09!112;CL:0000542!2.10e-07!53;CL:0000051!2.10e-07!53;CL:0000838!4.61e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.87e-51;33!CL:0002057;3.87e-51;33!CL:0000473;2.63e-37;39!CL:0000234;2.63e-37;39!CL:0000576;5.97e-23;48!CL:0000766;1.47e-13;69!CL:0002087;6.39e-11;104!CL:0000763;8.36e-09;100!CL:0000738;1.87e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.63e-43,42;CL:0002057,5.63e-43,42;CL:0000473,1.53e-39,48;CL:0000234,1.53e-39,48;CL:0002009,6.70e-31,61;CL:0002194,6.59e-30,59;CL:0000576,6.59e-30,59;CL:0000040,6.59e-30,59;CL:0000559,6.59e-30,59;CL:0002087,1.10e-28,115;CL:0002031,1.29e-28,120;CL:0000557,2.13e-27,67;CL:0000766,5.55e-27,72;CL:0000738,6.91e-27,136;CL:0000839,6.77e-26,66;CL:0002032,1.91e-23,161;CL:0000837,1.91e-23,161;CL:0000037,5.92e-22,168;CL:0000988,3.27e-20,177;CL:0000763,3.98e-19,108;CL:0000049,3.98e-19,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.46e-33;42!CL:0000049;3.69e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-10!102;UBERON:0003061!1.10e-10!102;UBERON:0002193!2.87e-10!112;UBERON:0002371!3.56e-09!80;UBERON:0002405!4.87e-08!115;UBERON:0001474!2.52e-07!86;UBERON:0004765!7.86e-07!101;UBERON:0001434!7.86e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.60e-25,76;UBERON:0001474,1.31e-22,82;UBERON:0002405,2.50e-20,93;UBERON:0002390,2.54e-20,98;UBERON:0003061,2.54e-20,98;UBERON:0004765,7.55e-20,90;UBERON:0002193,7.19e-19,108;UBERON:0001434,4.99e-17,100;UBERON:0002204,3.61e-09,167;UBERON:0003081,1.06e-08,203 | |||
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| |||
|short_description=p10@FAM107B | |||
}} |
Revision as of 12:33, 10 September 2013
Short description: | p10@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_FAM107B_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENST00000475858_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.63e-43 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.63e-43 | 42 |
defensive cell | 1.53e-39 | 48 |
phagocyte | 1.53e-39 | 48 |
macrophage dendritic cell progenitor | 6.70e-31 | 61 |
monopoietic cell | 6.59e-30 | 59 |
monocyte | 6.59e-30 | 59 |
monoblast | 6.59e-30 | 59 |
promonocyte | 6.59e-30 | 59 |
nongranular leukocyte | 1.10e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.29e-28 | 120 |
granulocyte monocyte progenitor cell | 2.13e-27 | 67 |
myeloid leukocyte | 5.55e-27 | 72 |
leukocyte | 6.91e-27 | 136 |
myeloid lineage restricted progenitor cell | 6.77e-26 | 66 |
hematopoietic oligopotent progenitor cell | 1.91e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.91e-23 | 161 |
hematopoietic stem cell | 5.92e-22 | 168 |
hematopoietic cell | 3.27e-20 | 177 |
myeloid cell | 3.98e-19 | 108 |
common myeloid progenitor | 3.98e-19 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.60e-25 | 76 |
bone element | 1.31e-22 | 82 |
immune system | 2.50e-20 | 93 |
hematopoietic system | 2.54e-20 | 98 |
blood island | 2.54e-20 | 98 |
skeletal element | 7.55e-20 | 90 |
hemolymphoid system | 7.19e-19 | 108 |
skeletal system | 4.99e-17 | 100 |
musculoskeletal system | 3.61e-09 | 167 |
lateral plate mesoderm | 1.06e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.