FFCP PHASE1:Hg19::chr10:114594528..114594539,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C92|description=CAGE_peak_at_chr10:114594528..114594539,-|id=chr10:114594528..114594539,-|ontology_enrichment_celltype=CL:0002393!2.91e-31!9;CL:0002397!2.91e-31!9;CL:0000875!9.65e-19!3;CL:0002396!9.65e-19!3;CL:0000842!1.01e-16!3;CL:0000224!1.11e-12!4;CL:0000763!1.26e-12!112;CL:0000049!1.26e-12!112;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0000766!1.05e-11!76;CL:0000988!1.61e-11!182;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0000738!2.32e-10!140;CL:0002009!2.91e-10!65;CL:0002087!5.25e-10!119;CL:0002057!1.14e-09!42;CL:0002032!1.72e-09!165;CL:0000837!1.72e-09!165;CL:0000839!2.26e-09!70;CL:0000557!3.28e-09!71;CL:0000860!6.34e-09!45;CL:0000080!1.27e-08!6;CL:0000767!2.80e-08!3|ontology_enrichment_celltype_v019=CL:0000875;5.01e-67;3!CL:0002396;5.01e-67;3!CL:0002393;1.41e-15;6!CL:0002397;1.41e-15;6!CL:0000576;5.16e-14;48!CL:0000766;1.32e-10;69!CL:0000763;2.44e-08;100|ontology_enrichment_celltype_v019_2=CL:0000875,5.01e-67,3;CL:0002396,5.01e-67,3;CL:0002393,3.97e-61,9;CL:0002397,3.97e-61,9;CL:0002194,7.27e-18,59;CL:0000576,7.27e-18,59;CL:0000040,7.27e-18,59;CL:0000559,7.27e-18,59;CL:0002009,2.75e-17,61;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0000839,5.41e-16,66;CL:0000557,9.32e-16,67;CL:0000766,1.13e-14,72;CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,1.02e-11,48;CL:0000234,1.02e-11,48;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002087,3.52e-09,115;CL:0002031,8.60e-09,120;CL:0000738,9.72e-08,136|ontology_enrichment_development_v019=CL:0002057;4.57e-09;42!CL:0000049;1.20e-08;108|ontology_enrichment_disease=DOID:8692!2.23e-08!31;DOID:1240!2.62e-08!39;DOID:2531!1.20e-07!51;DOID:0060083!1.20e-07!51;DOID:9119!3.57e-07!1;DOID:2355!6.76e-07!1|ontology_enrichment_disease_v019=DOID:8692;4.08e-11;31|ontology_enrichment_disease_v019_2=DOID:8692,1.00e-11,31;DOID:1240,2.13e-09,39;DOID:2531,2.89e-07,51;DOID:0060083,2.89e-07,51|ontology_enrichment_uberon=UBERON:0002390!1.18e-17!102;UBERON:0003061!1.18e-17!102;UBERON:0002193!1.05e-15!112;UBERON:0000178!9.87e-13!15;UBERON:0000179!9.87e-13!15;UBERON:0000463!9.87e-13!15;UBERON:0002106!3.63e-08!3;UBERON:0004854!3.63e-08!3;UBERON:0009034!3.63e-08!3;UBERON:0002095!3.63e-08!3;UBERON:0004782!3.63e-08!3;UBERON:0003281!3.63e-08!3;UBERON:0009664!3.63e-08!3;UBERON:0002296!3.63e-08!3;UBERON:0005602!3.63e-08!3;UBERON:0001179!3.63e-08!3;UBERON:0006293!3.63e-08!3;UBERON:0002371!6.29e-08!80;UBERON:0001474!3.19e-07!86;UBERON:0002405!8.39e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.61e-14,76;UBERON:0001474,6.81e-13,82;UBERON:0004765,9.50e-12,90;UBERON:0002405,2.28e-11,93;UBERON:0002390,8.69e-11,98;UBERON:0003061,8.69e-11,98;UBERON:0001434,1.43e-10,100;UBERON:0002193,8.80e-10,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5350634357433,1.06302149982522,0.419317291016752,0,0,0,6.55529310604872,5.76858363877361,5.66258876670365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,2.98092366383228,0,0.921722292925374,1.11838053946208,1.16794399198336,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:114594528..114594539,- | |||
|id=chr10:114594528..114594539,- | |||
|ontology_enrichment_celltype=CL:0002393!2.91e-31!9;CL:0002397!2.91e-31!9;CL:0000875!9.65e-19!3;CL:0002396!9.65e-19!3;CL:0000842!1.01e-16!3;CL:0000224!1.11e-12!4;CL:0000763!1.26e-12!112;CL:0000049!1.26e-12!112;CL:0000037!1.81e-12!172;CL:0000566!1.81e-12!172;CL:0000766!1.05e-11!76;CL:0000988!1.61e-11!182;CL:0002194!1.17e-10!63;CL:0000576!1.17e-10!63;CL:0000040!1.17e-10!63;CL:0000559!1.17e-10!63;CL:0000738!2.32e-10!140;CL:0002009!2.91e-10!65;CL:0002087!5.25e-10!119;CL:0002057!1.14e-09!42;CL:0002032!1.72e-09!165;CL:0000837!1.72e-09!165;CL:0000839!2.26e-09!70;CL:0000557!3.28e-09!71;CL:0000860!6.34e-09!45;CL:0000080!1.27e-08!6;CL:0000767!2.80e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;5.01e-67;3!CL:0002396;5.01e-67;3!CL:0002393;1.41e-15;6!CL:0002397;1.41e-15;6!CL:0000576;5.16e-14;48!CL:0000766;1.32e-10;69!CL:0000763;2.44e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,5.01e-67,3;CL:0002396,5.01e-67,3;CL:0002393,3.97e-61,9;CL:0002397,3.97e-61,9;CL:0002194,7.27e-18,59;CL:0000576,7.27e-18,59;CL:0000040,7.27e-18,59;CL:0000559,7.27e-18,59;CL:0002009,2.75e-17,61;CL:0000763,3.81e-16,108;CL:0000049,3.81e-16,108;CL:0000839,5.41e-16,66;CL:0000557,9.32e-16,67;CL:0000766,1.13e-14,72;CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,1.02e-11,48;CL:0000234,1.02e-11,48;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002087,3.52e-09,115;CL:0002031,8.60e-09,120;CL:0000738,9.72e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;4.57e-09;42!CL:0000049;1.20e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!2.23e-08!31;DOID:1240!2.62e-08!39;DOID:2531!1.20e-07!51;DOID:0060083!1.20e-07!51;DOID:9119!3.57e-07!1;DOID:2355!6.76e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.08e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.00e-11,31;DOID:1240,2.13e-09,39;DOID:2531,2.89e-07,51;DOID:0060083,2.89e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-17!102;UBERON:0003061!1.18e-17!102;UBERON:0002193!1.05e-15!112;UBERON:0000178!9.87e-13!15;UBERON:0000179!9.87e-13!15;UBERON:0000463!9.87e-13!15;UBERON:0002106!3.63e-08!3;UBERON:0004854!3.63e-08!3;UBERON:0009034!3.63e-08!3;UBERON:0002095!3.63e-08!3;UBERON:0004782!3.63e-08!3;UBERON:0003281!3.63e-08!3;UBERON:0009664!3.63e-08!3;UBERON:0002296!3.63e-08!3;UBERON:0005602!3.63e-08!3;UBERON:0001179!3.63e-08!3;UBERON:0006293!3.63e-08!3;UBERON:0002371!6.29e-08!80;UBERON:0001474!3.19e-07!86;UBERON:0002405!8.39e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.61e-14,76;UBERON:0001474,6.81e-13,82;UBERON:0004765,9.50e-12,90;UBERON:0002405,2.28e-11,93;UBERON:0002390,8.69e-11,98;UBERON:0003061,8.69e-11,98;UBERON:0001434,1.43e-10,100;UBERON:0002193,8.80e-10,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5350634357433,1.06302149982522,0.419317291016752,0,0,0,6.55529310604872,5.76858363877361,5.66258876670365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.684704037099577,0,0,0,0,0,2.98092366383228,0,0.921722292925374,1.11838053946208,1.16794399198336,0,0,0,0,0.99921590399346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04628948090749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23658523500376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.404234377916439,0.217716747896961,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:114594528..114594539,- | |||
}} |
Revision as of 11:48, 10 September 2013
Short description: | p@chr10:114594528..114594539, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114594528..114594539, - |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
non-classical monocyte | 5.01e-67 | 3 |
CD14-low, CD16-positive monocyte | 5.01e-67 | 3 |
intermediate monocyte | 3.97e-61 | 9 |
CD14-positive, CD16-positive monocyte | 3.97e-61 | 9 |
monopoietic cell | 7.27e-18 | 59 |
monocyte | 7.27e-18 | 59 |
monoblast | 7.27e-18 | 59 |
promonocyte | 7.27e-18 | 59 |
macrophage dendritic cell progenitor | 2.75e-17 | 61 |
myeloid cell | 3.81e-16 | 108 |
common myeloid progenitor | 3.81e-16 | 108 |
myeloid lineage restricted progenitor cell | 5.41e-16 | 66 |
granulocyte monocyte progenitor cell | 9.32e-16 | 67 |
myeloid leukocyte | 1.13e-14 | 72 |
classical monocyte | 2.31e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-13 | 42 |
defensive cell | 1.02e-11 | 48 |
phagocyte | 1.02e-11 | 48 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
nongranular leukocyte | 3.52e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 8.60e-09 | 120 |
leukocyte | 9.72e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.61e-14 | 76 |
bone element | 6.81e-13 | 82 |
skeletal element | 9.50e-12 | 90 |
immune system | 2.28e-11 | 93 |
hematopoietic system | 8.69e-11 | 98 |
blood island | 8.69e-11 | 98 |
skeletal system | 1.43e-10 | 100 |
hemolymphoid system | 8.80e-10 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.00e-11 | 31 |
leukemia | 2.13e-09 | 39 |
hematologic cancer | 2.89e-07 | 51 |
immune system cancer | 2.89e-07 | 51 |
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