FFCP PHASE1:Hg19::chr10:11362805..11362809,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-223bp_to_AF086447_5end|description=CAGE_peak_1_at_AF086447_5end|id=chr10:11362805..11362809,+|ontology_enrichment_celltype=CL:0000037!1.21e-31!172;CL:0000566!1.21e-31!172;CL:0000988!3.43e-30!182;CL:0002032!7.24e-30!165;CL:0000837!7.24e-30!165;CL:0000738!4.50e-25!140;CL:0002087!5.03e-18!119;CL:0002031!7.26e-17!124;CL:0000763!7.64e-17!112;CL:0000049!7.64e-17!112;CL:0000542!1.57e-12!53;CL:0000051!1.57e-12!53;CL:0000838!4.95e-12!52;CL:0000084!7.35e-11!25;CL:0000827!7.35e-11!25;CL:0000766!3.89e-10!76;CL:0000791!6.97e-10!18;CL:0000789!6.97e-10!18;CL:0002420!6.97e-10!18;CL:0002419!6.97e-10!18;CL:0000790!6.97e-10!18;CL:0000839!6.14e-07!70;CL:0000624!7.65e-07!6;CL:0002393!9.88e-07!9;CL:0002397!9.88e-07!9|ontology_enrichment_celltype_v019=CL:0000226;3.55e-12;3!CL:0000842;3.55e-12;3!CL:0000791;4.22e-12;18!CL:0000789;4.22e-12;18!CL:0002419;4.22e-12;18!CL:0000623;4.87e-12;3!CL:0000624;2.87e-10;6!CL:0000084;2.49e-08;25!CL:0000094;1.10e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,3.32e-18,168;CL:0000738,3.98e-18,136;CL:0000988,7.42e-17,177;CL:0002032,2.41e-15,161;CL:0000837,2.41e-15,161;CL:0002087,1.34e-13,115;CL:0000791,2.93e-12,18;CL:0000789,2.93e-12,18;CL:0002420,2.93e-12,18;CL:0002419,2.93e-12,18;CL:0000790,2.93e-12,18;CL:0000623,4.49e-12,3;CL:0000825,4.49e-12,3;CL:0000226,5.40e-12,3;CL:0000842,5.40e-12,3;CL:0002031,1.87e-11,120;CL:0000838,5.81e-11,52;CL:0000542,1.07e-10,53;CL:0000051,1.07e-10,53;CL:0000624,1.54e-10,6;CL:0000084,1.94e-08,25;CL:0000827,1.94e-08,25;CL:0000094,1.31e-07,8;CL:0002393,9.35e-07,9;CL:0002397,9.35e-07,9|ontology_enrichment_development_v019=CL:0000790;4.22e-12;18|ontology_enrichment_disease=DOID:1240!1.89e-09!39;DOID:2531!4.20e-08!51;DOID:0060083!4.20e-08!51;DOID:8692!9.88e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.85e-14!115;UBERON:0002020!7.97e-14!34;UBERON:0003528!7.97e-14!34;UBERON:0001893!9.46e-14!34;UBERON:0002791!2.21e-13!33;UBERON:0001869!3.54e-13!32;UBERON:0002780!4.65e-12!41;UBERON:0001890!4.65e-12!41;UBERON:0006240!4.65e-12!41;UBERON:0003080!1.52e-11!42;UBERON:0002390!6.01e-10!102;UBERON:0003061!6.01e-10!102;UBERON:0000956!2.41e-09!25;UBERON:0000203!2.41e-09!25;UBERON:0002619!2.83e-09!22;UBERON:0001049!3.70e-09!57;UBERON:0005068!3.70e-09!57;UBERON:0006241!3.70e-09!57;UBERON:0007135!3.70e-09!57;UBERON:0002616!1.63e-08!59;UBERON:0000178!2.74e-08!15;UBERON:0000179!2.74e-08!15;UBERON:0000463!2.74e-08!15;UBERON:0002193!3.73e-08!112;UBERON:0001950!7.09e-08!20;UBERON:0003075!3.60e-07!86;UBERON:0007284!3.60e-07!86;UBERON:0002346!9.21e-07!90|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-18;15!UBERON:0000179;2.98e-18;15!UBERON:0000463;2.98e-18;15!UBERON:0002390;1.91e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.23e-18,15;UBERON:0000179,2.23e-18,15;UBERON:0000463,2.23e-18,15;UBERON:0002390,1.55e-08,98;UBERON:0003061,1.55e-08,98;UBERON:0002193,2.27e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.236132343941038,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0,0,0,0.553995408531877,2.60707781711184,1.51907609501096,0.671746422719773,0,0.257575567634187,0.290796477559129,1.13362783106643,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,1.25624332628372,1.0429658368404,0,0,0,0,0,0.212604299965044,0.628975936525128,1.34794357375794,0.750884464207532,0.16072558669708,0.855038231223746,1.79025009479181,1.27864907635244,0,0,0,0.426730222566507,0,1.14950487990897,0,0,2.84606484554724,1.76171156811282,0.764546456250458,0,1.68152568894461,0.263384084775077,2.55722701147983,7.46720449223413,1.85041349099558,0.334372990781356,0.32592226663359,2.36723902867367,0,0.222820913770347,1.47302953737419,2.21533894583621,1.08321545506006,1.0247305578054,0.520237390239513,1.47994114143309,0.829050053357545,0,0.296573126324121,1.33770414044857,2.09071047609954,0.226618685395132,0.766440987203842,1.37450978193052,0.506039384039006,0.318565414324097,0.651083453856419,0,0.451725357233318,0.255973222308837,0,1.18388626022008,0,2.62088766192152,3.20928234940209,1.44824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.196468613246569,0,0,0,0.348259474598534,0.132957960518865,0.715471872916026,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0.352193736052904,1.03664057770386,1.72943944100354,0.6312121671319,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,1.37921532141349,2.80315847317372,2.18183161675572,0,1.30139853857622,0,0.167516265334349,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,2.06768026122887,3.01999881146064,1.28073069364133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.70894156152249,0.476463550915578,1.23408681925858,1.29694662238543,1.62009431171434,1.58625035258854,0,0,0,0.371606350251437,0,0.355709216742071,0.159426272728822,0.199579371432817,0.383010740264733,0.846694330895531,0.324621940274555,3.65036331547496,0.912938716132769,0.313359791546046,2.50634477090067,0.169291777801603,0.642352300414798,0.80719882876419,0.851692475380653,0.343505344755765,0,0.223676107892416,0.500547425135725,0.19538809540204,0.278406173895242,0,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0.36408156524854,0.445773537109913,0,0,0.296964680832639,0,0,0.844016498463076,0.111308705022906,0,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.361789315876224,0,0.663475559587348,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0.370691816839509,0.104421949505455,0.134802265961354,1.60515529459758,0,0,0,0,0.394584402849391,0,0.61214552326098,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0.19980960958213,0,0.114536596165916,0,0,0,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0.717873024576814,0.399358000997982,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0.254019996197353,1.59045937961861,0.544813624446302,0,0,0,0,0,0.303747783290123,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0.366078794705889,0.3755727921195,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0.779441235357554,0.797189041880179,0.817826971279221,0,0,0,0.19998739585493,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.319267718114302,0.205116364240755,0.756215088665154,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0.202612753855184,0,0.206686796501184,0.253663240775627,0.546974809018219,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0.785577949580009,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0,0.399764623699716,0,0,0,0,0,0.143339583151451,0.788857810965923,0.271965960763659,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.151557396436479,0.267964130156178,0.829169439458779,0.517164979309476,0.213233981900981,0,0,0.248298857183432,0,0,0,0.217716747896961,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0.244482888365733,0,0,0.201273793591026,0.641136984606466|short_description=p1@AF086447}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-223bp_to_AF086447_5end | |||
|description=CAGE_peak_1_at_AF086447_5end | |||
|id=chr10:11362805..11362809,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.21e-31!172;CL:0000566!1.21e-31!172;CL:0000988!3.43e-30!182;CL:0002032!7.24e-30!165;CL:0000837!7.24e-30!165;CL:0000738!4.50e-25!140;CL:0002087!5.03e-18!119;CL:0002031!7.26e-17!124;CL:0000763!7.64e-17!112;CL:0000049!7.64e-17!112;CL:0000542!1.57e-12!53;CL:0000051!1.57e-12!53;CL:0000838!4.95e-12!52;CL:0000084!7.35e-11!25;CL:0000827!7.35e-11!25;CL:0000766!3.89e-10!76;CL:0000791!6.97e-10!18;CL:0000789!6.97e-10!18;CL:0002420!6.97e-10!18;CL:0002419!6.97e-10!18;CL:0000790!6.97e-10!18;CL:0000839!6.14e-07!70;CL:0000624!7.65e-07!6;CL:0002393!9.88e-07!9;CL:0002397!9.88e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000226;3.55e-12;3!CL:0000842;3.55e-12;3!CL:0000791;4.22e-12;18!CL:0000789;4.22e-12;18!CL:0002419;4.22e-12;18!CL:0000623;4.87e-12;3!CL:0000624;2.87e-10;6!CL:0000084;2.49e-08;25!CL:0000094;1.10e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.32e-18,168;CL:0000738,3.98e-18,136;CL:0000988,7.42e-17,177;CL:0002032,2.41e-15,161;CL:0000837,2.41e-15,161;CL:0002087,1.34e-13,115;CL:0000791,2.93e-12,18;CL:0000789,2.93e-12,18;CL:0002420,2.93e-12,18;CL:0002419,2.93e-12,18;CL:0000790,2.93e-12,18;CL:0000623,4.49e-12,3;CL:0000825,4.49e-12,3;CL:0000226,5.40e-12,3;CL:0000842,5.40e-12,3;CL:0002031,1.87e-11,120;CL:0000838,5.81e-11,52;CL:0000542,1.07e-10,53;CL:0000051,1.07e-10,53;CL:0000624,1.54e-10,6;CL:0000084,1.94e-08,25;CL:0000827,1.94e-08,25;CL:0000094,1.31e-07,8;CL:0002393,9.35e-07,9;CL:0002397,9.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000790;4.22e-12;18 | |||
|ontology_enrichment_disease=DOID:1240!1.89e-09!39;DOID:2531!4.20e-08!51;DOID:0060083!4.20e-08!51;DOID:8692!9.88e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.85e-14!115;UBERON:0002020!7.97e-14!34;UBERON:0003528!7.97e-14!34;UBERON:0001893!9.46e-14!34;UBERON:0002791!2.21e-13!33;UBERON:0001869!3.54e-13!32;UBERON:0002780!4.65e-12!41;UBERON:0001890!4.65e-12!41;UBERON:0006240!4.65e-12!41;UBERON:0003080!1.52e-11!42;UBERON:0002390!6.01e-10!102;UBERON:0003061!6.01e-10!102;UBERON:0000956!2.41e-09!25;UBERON:0000203!2.41e-09!25;UBERON:0002619!2.83e-09!22;UBERON:0001049!3.70e-09!57;UBERON:0005068!3.70e-09!57;UBERON:0006241!3.70e-09!57;UBERON:0007135!3.70e-09!57;UBERON:0002616!1.63e-08!59;UBERON:0000178!2.74e-08!15;UBERON:0000179!2.74e-08!15;UBERON:0000463!2.74e-08!15;UBERON:0002193!3.73e-08!112;UBERON:0001950!7.09e-08!20;UBERON:0003075!3.60e-07!86;UBERON:0007284!3.60e-07!86;UBERON:0002346!9.21e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-18;15!UBERON:0000179;2.98e-18;15!UBERON:0000463;2.98e-18;15!UBERON:0002390;1.91e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.23e-18,15;UBERON:0000179,2.23e-18,15;UBERON:0000463,2.23e-18,15;UBERON:0002390,1.55e-08,98;UBERON:0003061,1.55e-08,98;UBERON:0002193,2.27e-07,108 | |||
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| |||
|short_description=p1@AF086447 | |||
}} |
Revision as of 11:46, 10 September 2013
Short description: | p1@AF086447 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AF086447_5end |
Coexpression cluster: | NA |
Association with transcript: | -223bp_to_AF086447_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.32e-18 | 168 |
leukocyte | 3.98e-18 | 136 |
hematopoietic cell | 7.42e-17 | 177 |
hematopoietic oligopotent progenitor cell | 2.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.41e-15 | 161 |
nongranular leukocyte | 1.34e-13 | 115 |
mature alpha-beta T cell | 2.93e-12 | 18 |
alpha-beta T cell | 2.93e-12 | 18 |
immature T cell | 2.93e-12 | 18 |
mature T cell | 2.93e-12 | 18 |
immature alpha-beta T cell | 2.93e-12 | 18 |
natural killer cell | 4.49e-12 | 3 |
pro-NK cell | 4.49e-12 | 3 |
single nucleate cell | 5.40e-12 | 3 |
mononuclear cell | 5.40e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 1.87e-11 | 120 |
lymphoid lineage restricted progenitor cell | 5.81e-11 | 52 |
lymphocyte | 1.07e-10 | 53 |
common lymphoid progenitor | 1.07e-10 | 53 |
CD4-positive, alpha-beta T cell | 1.54e-10 | 6 |
T cell | 1.94e-08 | 25 |
pro-T cell | 1.94e-08 | 25 |
granulocyte | 1.31e-07 | 8 |
intermediate monocyte | 9.35e-07 | 9 |
CD14-positive, CD16-positive monocyte | 9.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 2.23e-18 | 15 |
haemolymphatic fluid | 2.23e-18 | 15 |
organism substance | 2.23e-18 | 15 |
hematopoietic system | 1.55e-08 | 98 |
blood island | 1.55e-08 | 98 |
hemolymphoid system | 2.27e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.