FFCP PHASE1:Hg19::chr10:1115346..1115349,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:1115346..1115349,+|id=chr10:1115346..1115349,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000840;2.09e-10;5!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0002535;2.07e-08;2!CL:0000990;3.14e-07;8|ontology_enrichment_celltype_v019_2=CL:0000840,2.52e-10,5;CL:0001029,2.52e-10,5;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0002535,3.08e-08,2;CL:0000990,3.55e-07,8|ontology_enrichment_development_v019=UBERON:0010227;5.98e-16;1!UBERON:0005425;1.66e-15;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002079;5.98e-16;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001872;2.66e-12;5!UBERON:0001950;4.38e-11;20!UBERON:0002619;3.82e-10;22!UBERON:0000956;5.29e-09;25!UBERON:0000203;5.29e-09;25!UBERON:0002081;1.24e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0002702;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0003528;3.18e-07;34!UBERON:0002020;3.18e-07;34!UBERON:0001869;3.18e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002079,6.44e-16,1;UBERON:0000941,2.06e-15,1;UBERON:0001785,2.06e-15,1;UBERON:0002464,2.06e-15,1;UBERON:0004904,2.06e-15,1;UBERON:0001021,2.06e-15,1;UBERON:0003902,2.06e-15,1;UBERON:0005425,2.06e-15,1;UBERON:0001872,2.12e-12,5;UBERON:0001950,3.84e-11,20;UBERON:0002619,3.39e-10,22;UBERON:0000956,4.77e-09,25;UBERON:0000203,4.77e-09,25;UBERON:0002081,1.29e-08,2;UBERON:0010227,1.29e-08,2;UBERON:0002702,1.50e-08,2;UBERON:0003714,2.31e-08,2;UBERON:0005162,2.31e-08,2;UBERON:0000122,2.31e-08,2;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0002791,3.57e-07,32;UBERON:0001869,3.57e-07,32;UBERON:0003528,8.94e-07,34;UBERON:0002020,8.94e-07,34;UBERON:0001893,8.94e-07,34|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534893840235659,0.164201178899891,0.236132343941038,0,0.383829398097213,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,1.95309783644267,2.68698569087909,0,0,0,0,0.485168122375632,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,1.40900451698243,0,0.657751618414705,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0.710331756132051,0,0,0,0.579297615531196,0,0,0,0,0,0,0,0,0.283604451492204,0,0,0.0654895377488563,0,0,0,0,1.06366368415092,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,1.72351904261178,0,0,0,0,0.425325291727159,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.513372145118994,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.276242966807689,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0.574265537996172,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0.456469358066384,0,0,0.169291777801603,0.321176150207399,0.605399121573143,0,0.343505344755765,0,0.894704431569664,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0.556543525114529,0,0.211125408127993,0,0,1.0077309914171,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.568967241427498,0,0,0,0,0.520874984799877,0,0,0,0,0.886642856860642,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0.435296032902013,0,0,0.290268993867255,0.0730893170861856,0.246346371159628,0.0969890164884194,0,0,0,0,0.06331079595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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:1115346..1115349,+ | |||
|id=chr10:1115346..1115349,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000840;2.09e-10;5!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0002535;2.07e-08;2!CL:0000990;3.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.52e-10,5;CL:0001029,2.52e-10,5;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0002535,3.08e-08,2;CL:0000990,3.55e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.98e-16;1!UBERON:0005425;1.66e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.98e-16;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001872;2.66e-12;5!UBERON:0001950;4.38e-11;20!UBERON:0002619;3.82e-10;22!UBERON:0000956;5.29e-09;25!UBERON:0000203;5.29e-09;25!UBERON:0002081;1.24e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0002702;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0003528;3.18e-07;34!UBERON:0002020;3.18e-07;34!UBERON:0001869;3.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,6.44e-16,1;UBERON:0000941,2.06e-15,1;UBERON:0001785,2.06e-15,1;UBERON:0002464,2.06e-15,1;UBERON:0004904,2.06e-15,1;UBERON:0001021,2.06e-15,1;UBERON:0003902,2.06e-15,1;UBERON:0005425,2.06e-15,1;UBERON:0001872,2.12e-12,5;UBERON:0001950,3.84e-11,20;UBERON:0002619,3.39e-10,22;UBERON:0000956,4.77e-09,25;UBERON:0000203,4.77e-09,25;UBERON:0002081,1.29e-08,2;UBERON:0010227,1.29e-08,2;UBERON:0002702,1.50e-08,2;UBERON:0003714,2.31e-08,2;UBERON:0005162,2.31e-08,2;UBERON:0000122,2.31e-08,2;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0002791,3.57e-07,32;UBERON:0001869,3.57e-07,32;UBERON:0003528,8.94e-07,34;UBERON:0002020,8.94e-07,34;UBERON:0001893,8.94e-07,34 | |||
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|short_description=p@chr10:1115346..1115349,+ | |||
}} |
Revision as of 11:40, 10 September 2013
Short description: | p@chr10:1115346..1115349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:1115346..1115349, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.52e-10 | 5 |
common dendritic progenitor | 2.52e-10 | 5 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
epithelial cell of cervix | 3.08e-08 | 2 |
conventional dendritic cell | 3.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 6.44e-16 | 1 |
cranial nerve II | 2.06e-15 | 1 |
cranial nerve | 2.06e-15 | 1 |
nerve trunk | 2.06e-15 | 1 |
nerve connecting eye with brain | 2.06e-15 | 1 |
nerve | 2.06e-15 | 1 |
retinal neural layer | 2.06e-15 | 1 |
presumptive neural retina | 2.06e-15 | 1 |
parietal lobe | 2.12e-12 | 5 |
neocortex | 3.84e-11 | 20 |
regional part of cerebral cortex | 3.39e-10 | 22 |
cerebral cortex | 4.77e-09 | 25 |
pallium | 4.77e-09 | 25 |
cardiac atrium | 1.29e-08 | 2 |
future cardiac atrium | 1.29e-08 | 2 |
middle frontal gyrus | 1.50e-08 | 2 |
neural tissue | 2.31e-08 | 2 |
multi cell component structure | 2.31e-08 | 2 |
neuron projection bundle | 2.31e-08 | 2 |
uterine epithelium | 3.08e-08 | 2 |
cervix epithelium | 3.08e-08 | 2 |
regional part of telencephalon | 3.57e-07 | 32 |
cerebral hemisphere | 3.57e-07 | 32 |
brain grey matter | 8.94e-07 | 34 |
gray matter | 8.94e-07 | 34 |
telencephalon | 8.94e-07 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.