FFCP PHASE1:Hg19::chr10:109449332..109449361,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C26|description=CAGE_peak_at_chr10:109449332..109449361,+|id=chr10:109449332..109449361,+|ontology_enrichment_celltype=CL:0002194!2.86e-65!63;CL:0000576!2.86e-65!63;CL:0000040!2.86e-65!63;CL:0000559!2.86e-65!63;CL:0002009!3.11e-65!65;CL:0002057!4.57e-63!42;CL:0000766!1.97e-60!76;CL:0000557!3.03e-58!71;CL:0000860!7.11e-58!45;CL:0000839!5.04e-57!70;CL:0000763!5.37e-55!112;CL:0000049!5.37e-55!112;CL:0002087!4.44e-50!119;CL:0000037!6.28e-49!172;CL:0000566!6.28e-49!172;CL:0002032!2.94e-47!165;CL:0000837!2.94e-47!165;CL:0000738!4.24e-47!140;CL:0000988!7.15e-45!182;CL:0002031!1.24e-43!124;CL:0000134!8.20e-12!358;CL:0002320!3.58e-11!365;CL:0002393!2.42e-10!9;CL:0002397!2.42e-10!9;CL:0000219!5.85e-09!390|ontology_enrichment_celltype_v019=CL:0000473;2.10e-74;39!CL:0000234;2.10e-74;39!CL:0000860;3.72e-74;33!CL:0002057;3.72e-74;33!CL:0000576;3.63e-50;48!CL:0000766;1.12e-38;69!CL:0000763;5.38e-27;100!CL:0000235;6.04e-17;6!CL:0002087;1.68e-11;104!CL:0000738;1.44e-10;136!CL:0000767;7.69e-09;3!CL:0000988;5.74e-08;177!CL:0002393;9.91e-08;6!CL:0002397;9.91e-08;6|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-96,48;CL:0000234,1.62e-96,48;CL:0002194,3.10e-87,59;CL:0000576,3.10e-87,59;CL:0000040,3.10e-87,59;CL:0000559,3.10e-87,59;CL:0002009,4.84e-84,61;CL:0000860,8.05e-81,42;CL:0002057,8.05e-81,42;CL:0000766,6.44e-80,72;CL:0000839,6.85e-77,66;CL:0000763,1.10e-76,108;CL:0000049,1.10e-76,108;CL:0000557,1.38e-75,67;CL:0000037,1.91e-50,168;CL:0002032,4.28e-49,161;CL:0000837,4.28e-49,161;CL:0000988,3.45e-47,177;CL:0002087,6.98e-46,115;CL:0000738,1.20e-42,136;CL:0002031,2.58e-39,120;CL:0000134,1.09e-16,354;CL:0000235,1.11e-16,6;CL:0002320,4.26e-16,361;CL:0000219,5.17e-14,386;CL:0000048,1.81e-11,427;CL:0000034,2.50e-11,441;CL:0000723,4.04e-11,433;CL:0000767,8.74e-09,3|ontology_enrichment_development_v019=CL:0002057;7.74e-59;42!CL:0000049;6.83e-25;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;2.09e-12;31!DOID:1240;1.09e-07;39|ontology_enrichment_disease_v019_2=DOID:8692,6.94e-13,31;DOID:1240,1.23e-09,39|ontology_enrichment_uberon=UBERON:0002390!1.34e-64!102;UBERON:0003061!1.34e-64!102;UBERON:0002193!1.72e-60!112;UBERON:0002371!1.00e-49!80;UBERON:0001474!4.89e-45!86;UBERON:0002405!1.49e-38!115;UBERON:0004765!8.97e-36!101;UBERON:0001434!8.97e-36!101;UBERON:0003081!1.78e-23!216;UBERON:0002204!1.22e-16!167;UBERON:0000178!2.65e-11!15;UBERON:0000179!2.65e-11!15;UBERON:0000463!2.65e-11!15;UBERON:0002384!8.77e-11!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-10;15!UBERON:0000179;1.29e-10;15!UBERON:0000463;1.29e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-69,98;UBERON:0003061,1.29e-69,98;UBERON:0002371,2.24e-65,76;UBERON:0002193,4.90e-62,108;UBERON:0001474,8.41e-60,82;UBERON:0004765,1.63e-53,90;UBERON:0002405,1.97e-51,93;UBERON:0001434,4.68e-47,100;UBERON:0003081,4.07e-27,203;UBERON:0002204,1.10e-23,167;UBERON:0002384,2.73e-15,371;UBERON:0000926,5.11e-13,315;UBERON:0004120,5.11e-13,315;UBERON:0006603,5.11e-13,315;UBERON:0000178,1.40e-10,15;UBERON:0000179,1.40e-10,15;UBERON:0000463,1.40e-10,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.314843125254717,1.57345710739562,1.53531759238885,2.01260960310899,0,0,0,0,0,0,1.66198622559563,2.4065333696417,2.38711957787437,0.223915474239924,0.647787332037959,0,5.52513307362346,7.55751887377619,1.69808842831471,6.74044207026485,4.52284676824008,0.929119112685311,2.8769239232215,3.84241059793651,1.89185783910868,7.58440497620561,7.74581620300591,1.35426486594342,6.02375486536335,4.63940455098338,2.69668181334102,7.03992952453076,8.02322567690234,0.639337125799041,2.96866170168044,3.59034583718937,2.98357325372886,4.93355705668593,2.8369261234557,1.86846674698672,6.78371396193207,3.12889751052121,4.34377689410233,4.23779651843358,5.52416453981347,3.16462387440884,0.633765858935825,2.55125159958052,0.628975936525128,5.72876018847125,6.30742949934327,9.48280961512773,0,0.19891667719909,0.365328307529268,0,0,1.77901850772711,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.451725357233318,0.383959833463255,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,1.17002132569619,4.01304138179566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0.385029108839245,0,0,0,0,0,0.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr10:109449332..109449361,+ | |||
|id=chr10:109449332..109449361,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.86e-65!63;CL:0000576!2.86e-65!63;CL:0000040!2.86e-65!63;CL:0000559!2.86e-65!63;CL:0002009!3.11e-65!65;CL:0002057!4.57e-63!42;CL:0000766!1.97e-60!76;CL:0000557!3.03e-58!71;CL:0000860!7.11e-58!45;CL:0000839!5.04e-57!70;CL:0000763!5.37e-55!112;CL:0000049!5.37e-55!112;CL:0002087!4.44e-50!119;CL:0000037!6.28e-49!172;CL:0000566!6.28e-49!172;CL:0002032!2.94e-47!165;CL:0000837!2.94e-47!165;CL:0000738!4.24e-47!140;CL:0000988!7.15e-45!182;CL:0002031!1.24e-43!124;CL:0000134!8.20e-12!358;CL:0002320!3.58e-11!365;CL:0002393!2.42e-10!9;CL:0002397!2.42e-10!9;CL:0000219!5.85e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.10e-74;39!CL:0000234;2.10e-74;39!CL:0000860;3.72e-74;33!CL:0002057;3.72e-74;33!CL:0000576;3.63e-50;48!CL:0000766;1.12e-38;69!CL:0000763;5.38e-27;100!CL:0000235;6.04e-17;6!CL:0002087;1.68e-11;104!CL:0000738;1.44e-10;136!CL:0000767;7.69e-09;3!CL:0000988;5.74e-08;177!CL:0002393;9.91e-08;6!CL:0002397;9.91e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-96,48;CL:0000234,1.62e-96,48;CL:0002194,3.10e-87,59;CL:0000576,3.10e-87,59;CL:0000040,3.10e-87,59;CL:0000559,3.10e-87,59;CL:0002009,4.84e-84,61;CL:0000860,8.05e-81,42;CL:0002057,8.05e-81,42;CL:0000766,6.44e-80,72;CL:0000839,6.85e-77,66;CL:0000763,1.10e-76,108;CL:0000049,1.10e-76,108;CL:0000557,1.38e-75,67;CL:0000037,1.91e-50,168;CL:0002032,4.28e-49,161;CL:0000837,4.28e-49,161;CL:0000988,3.45e-47,177;CL:0002087,6.98e-46,115;CL:0000738,1.20e-42,136;CL:0002031,2.58e-39,120;CL:0000134,1.09e-16,354;CL:0000235,1.11e-16,6;CL:0002320,4.26e-16,361;CL:0000219,5.17e-14,386;CL:0000048,1.81e-11,427;CL:0000034,2.50e-11,441;CL:0000723,4.04e-11,433;CL:0000767,8.74e-09,3 | |||
|ontology_enrichment_development_v019=CL:0002057;7.74e-59;42!CL:0000049;6.83e-25;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;2.09e-12;31!DOID:1240;1.09e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.94e-13,31;DOID:1240,1.23e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-64!102;UBERON:0003061!1.34e-64!102;UBERON:0002193!1.72e-60!112;UBERON:0002371!1.00e-49!80;UBERON:0001474!4.89e-45!86;UBERON:0002405!1.49e-38!115;UBERON:0004765!8.97e-36!101;UBERON:0001434!8.97e-36!101;UBERON:0003081!1.78e-23!216;UBERON:0002204!1.22e-16!167;UBERON:0000178!2.65e-11!15;UBERON:0000179!2.65e-11!15;UBERON:0000463!2.65e-11!15;UBERON:0002384!8.77e-11!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-10;15!UBERON:0000179;1.29e-10;15!UBERON:0000463;1.29e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.29e-69,98;UBERON:0003061,1.29e-69,98;UBERON:0002371,2.24e-65,76;UBERON:0002193,4.90e-62,108;UBERON:0001474,8.41e-60,82;UBERON:0004765,1.63e-53,90;UBERON:0002405,1.97e-51,93;UBERON:0001434,4.68e-47,100;UBERON:0003081,4.07e-27,203;UBERON:0002204,1.10e-23,167;UBERON:0002384,2.73e-15,371;UBERON:0000926,5.11e-13,315;UBERON:0004120,5.11e-13,315;UBERON:0006603,5.11e-13,315;UBERON:0000178,1.40e-10,15;UBERON:0000179,1.40e-10,15;UBERON:0000463,1.40e-10,15 | |||
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|short_description=p@chr10:109449332..109449361,+ | |||
}} |
Revision as of 11:38, 10 September 2013
Short description: | p@chr10:109449332..109449361, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109449332..109449361, + |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.62e-96 | 48 |
phagocyte | 1.62e-96 | 48 |
monopoietic cell | 3.10e-87 | 59 |
monocyte | 3.10e-87 | 59 |
monoblast | 3.10e-87 | 59 |
promonocyte | 3.10e-87 | 59 |
macrophage dendritic cell progenitor | 4.84e-84 | 61 |
classical monocyte | 8.05e-81 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.05e-81 | 42 |
myeloid leukocyte | 6.44e-80 | 72 |
myeloid lineage restricted progenitor cell | 6.85e-77 | 66 |
myeloid cell | 1.10e-76 | 108 |
common myeloid progenitor | 1.10e-76 | 108 |
granulocyte monocyte progenitor cell | 1.38e-75 | 67 |
hematopoietic stem cell | 1.91e-50 | 168 |
hematopoietic oligopotent progenitor cell | 4.28e-49 | 161 |
hematopoietic multipotent progenitor cell | 4.28e-49 | 161 |
hematopoietic cell | 3.45e-47 | 177 |
nongranular leukocyte | 6.98e-46 | 115 |
leukocyte | 1.20e-42 | 136 |
hematopoietic lineage restricted progenitor cell | 2.58e-39 | 120 |
mesenchymal cell | 1.09e-16 | 354 |
macrophage | 1.11e-16 | 6 |
connective tissue cell | 4.26e-16 | 361 |
motile cell | 5.17e-14 | 386 |
multi fate stem cell | 1.81e-11 | 427 |
stem cell | 2.50e-11 | 441 |
somatic stem cell | 4.04e-11 | 433 |
basophil | 8.74e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.29e-69 | 98 |
blood island | 1.29e-69 | 98 |
bone marrow | 2.24e-65 | 76 |
hemolymphoid system | 4.90e-62 | 108 |
bone element | 8.41e-60 | 82 |
skeletal element | 1.63e-53 | 90 |
immune system | 1.97e-51 | 93 |
skeletal system | 4.68e-47 | 100 |
lateral plate mesoderm | 4.07e-27 | 203 |
musculoskeletal system | 1.10e-23 | 167 |
connective tissue | 2.73e-15 | 371 |
mesoderm | 5.11e-13 | 315 |
mesoderm-derived structure | 5.11e-13 | 315 |
presumptive mesoderm | 5.11e-13 | 315 |
blood | 1.40e-10 | 15 |
haemolymphatic fluid | 1.40e-10 | 15 |
organism substance | 1.40e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.94e-13 | 31 |
leukemia | 1.23e-09 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.