FFCP PHASE1:Hg19::chr10:104160765..104160775,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C174|description=CAGE_peak_at_chr10:104160765..104160775,+|id=chr10:104160765..104160775,+|ontology_enrichment_celltype=CL:0000860!3.31e-18!45;CL:0002057!4.86e-18!42;CL:0002194!7.40e-15!63;CL:0000576!7.40e-15!63;CL:0000040!7.40e-15!63;CL:0000559!7.40e-15!63;CL:0002009!1.15e-14!65;CL:0000557!1.11e-12!71;CL:0000839!2.17e-12!70;CL:0000766!7.66e-12!76;CL:0002087!8.83e-12!119;CL:0000738!1.51e-10!140;CL:0002031!6.76e-10!124;CL:0000763!1.17e-07!112;CL:0000049!1.17e-07!112;CL:0000988!1.46e-07!182;CL:0002032!1.76e-07!165;CL:0000837!1.76e-07!165;CL:0000063!2.33e-07!578;CL:0000037!5.09e-07!172;CL:0000566!5.09e-07!172|ontology_enrichment_celltype_v019=CL:0000860;7.97e-88;33!CL:0002057;7.97e-88;33!CL:0000473;3.92e-65;39!CL:0000234;3.92e-65;39!CL:0000576;8.64e-39;48!CL:0000766;3.77e-24;69!CL:0002087;3.87e-12;104!CL:0000763;4.10e-11;100!CL:0000738;5.39e-07;136|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-75,42;CL:0002057,1.97e-75,42;CL:0000473,3.25e-70,48;CL:0000234,3.25e-70,48;CL:0002194,7.07e-55,59;CL:0000576,7.07e-55,59;CL:0000040,7.07e-55,59;CL:0000559,7.07e-55,59;CL:0002009,6.74e-53,61;CL:0000839,1.82e-48,66;CL:0000557,1.17e-47,67;CL:0000766,5.99e-44,72;CL:0002087,1.25e-29,115;CL:0002031,4.00e-28,120;CL:0000763,2.73e-27,108;CL:0000049,2.73e-27,108;CL:0000738,4.84e-24,136;CL:0000988,9.61e-20,177;CL:0002032,2.80e-19,161;CL:0000837,2.80e-19,161;CL:0000037,3.37e-18,168;CL:0002320,8.26e-07,361|ontology_enrichment_development_v019=CL:0002057;1.90e-56;42!CL:0000049;2.03e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.72e-12!102;UBERON:0003061!2.72e-12!102;UBERON:0002371!2.31e-11!80;UBERON:0002193!3.71e-11!112;UBERON:0001474!1.98e-09!86;UBERON:0004765!5.51e-09!101;UBERON:0001434!5.51e-09!101;UBERON:0001737!2.28e-07!9|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-41,76;UBERON:0002390,1.65e-38,98;UBERON:0003061,1.65e-38,98;UBERON:0001474,7.16e-38,82;UBERON:0002193,2.46e-34,108;UBERON:0004765,5.69e-34,90;UBERON:0002405,1.11e-32,93;UBERON:0001434,5.77e-30,100;UBERON:0003081,1.09e-17,203;UBERON:0002204,8.22e-17,167;UBERON:0000926,1.54e-10,315;UBERON:0004120,1.54e-10,315;UBERON:0006603,1.54e-10,315|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0.251085279189606,0.61130724598361,0.656804715599566,0.944529375764151,0,0,0,0,0,0,0,0.142169232487422,0,0,0.802177789880567,0,0,0,0,0.872389432677388,1.51150377475524,0.485168122375632,3.48643555358527,2.46700732813095,1.23882548358041,3.45230870786581,1.5369642391746,1.89185783910868,1.37898272294647,2.5819387343353,0,3.20011977222428,1.91034305040492,1.12361742222542,7.03992952453076,1.92557416245656,4.47535988059329,1.31940520074686,1.39624560335142,1.27867425159808,11.3181603065148,3.97169657283798,4.35975574296902,2.26123798731069,1.5644487552606,1.08594422352558,9.08099253950053,1.84138817993782,1.58231193720442,0,0,0.209658645508376,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0.587237189370939,1.52909291250092,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0.221533894583621,0,0.25618263945135,0.390178042679635,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,0,0.98667019366864,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.448346041655403,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0.193260853163297,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0.928735856063958,0,0.709840800239063,1.51726221070292,0.723033089650446,0.441175890929576,0.871517776369625,0.949082476444386,0.943819157121151,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.502644862058154,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.146676571641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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr10:104160765..104160775,+ | |||
|id=chr10:104160765..104160775,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.31e-18!45;CL:0002057!4.86e-18!42;CL:0002194!7.40e-15!63;CL:0000576!7.40e-15!63;CL:0000040!7.40e-15!63;CL:0000559!7.40e-15!63;CL:0002009!1.15e-14!65;CL:0000557!1.11e-12!71;CL:0000839!2.17e-12!70;CL:0000766!7.66e-12!76;CL:0002087!8.83e-12!119;CL:0000738!1.51e-10!140;CL:0002031!6.76e-10!124;CL:0000763!1.17e-07!112;CL:0000049!1.17e-07!112;CL:0000988!1.46e-07!182;CL:0002032!1.76e-07!165;CL:0000837!1.76e-07!165;CL:0000063!2.33e-07!578;CL:0000037!5.09e-07!172;CL:0000566!5.09e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.97e-88;33!CL:0002057;7.97e-88;33!CL:0000473;3.92e-65;39!CL:0000234;3.92e-65;39!CL:0000576;8.64e-39;48!CL:0000766;3.77e-24;69!CL:0002087;3.87e-12;104!CL:0000763;4.10e-11;100!CL:0000738;5.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.97e-75,42;CL:0002057,1.97e-75,42;CL:0000473,3.25e-70,48;CL:0000234,3.25e-70,48;CL:0002194,7.07e-55,59;CL:0000576,7.07e-55,59;CL:0000040,7.07e-55,59;CL:0000559,7.07e-55,59;CL:0002009,6.74e-53,61;CL:0000839,1.82e-48,66;CL:0000557,1.17e-47,67;CL:0000766,5.99e-44,72;CL:0002087,1.25e-29,115;CL:0002031,4.00e-28,120;CL:0000763,2.73e-27,108;CL:0000049,2.73e-27,108;CL:0000738,4.84e-24,136;CL:0000988,9.61e-20,177;CL:0002032,2.80e-19,161;CL:0000837,2.80e-19,161;CL:0000037,3.37e-18,168;CL:0002320,8.26e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-56;42!CL:0000049;2.03e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.72e-12!102;UBERON:0003061!2.72e-12!102;UBERON:0002371!2.31e-11!80;UBERON:0002193!3.71e-11!112;UBERON:0001474!1.98e-09!86;UBERON:0004765!5.51e-09!101;UBERON:0001434!5.51e-09!101;UBERON:0001737!2.28e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.50e-41,76;UBERON:0002390,1.65e-38,98;UBERON:0003061,1.65e-38,98;UBERON:0001474,7.16e-38,82;UBERON:0002193,2.46e-34,108;UBERON:0004765,5.69e-34,90;UBERON:0002405,1.11e-32,93;UBERON:0001434,5.77e-30,100;UBERON:0003081,1.09e-17,203;UBERON:0002204,8.22e-17,167;UBERON:0000926,1.54e-10,315;UBERON:0004120,1.54e-10,315;UBERON:0006603,1.54e-10,315 | |||
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| |||
|short_description=p@chr10:104160765..104160775,+ | |||
}} |
Revision as of 11:25, 10 September 2013
Short description: | p@chr10:104160765..104160775, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:104160765..104160775, + |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.97e-75 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.97e-75 | 42 |
defensive cell | 3.25e-70 | 48 |
phagocyte | 3.25e-70 | 48 |
monopoietic cell | 7.07e-55 | 59 |
monocyte | 7.07e-55 | 59 |
monoblast | 7.07e-55 | 59 |
promonocyte | 7.07e-55 | 59 |
macrophage dendritic cell progenitor | 6.74e-53 | 61 |
myeloid lineage restricted progenitor cell | 1.82e-48 | 66 |
granulocyte monocyte progenitor cell | 1.17e-47 | 67 |
myeloid leukocyte | 5.99e-44 | 72 |
nongranular leukocyte | 1.25e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 4.00e-28 | 120 |
myeloid cell | 2.73e-27 | 108 |
common myeloid progenitor | 2.73e-27 | 108 |
leukocyte | 4.84e-24 | 136 |
hematopoietic cell | 9.61e-20 | 177 |
hematopoietic oligopotent progenitor cell | 2.80e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.80e-19 | 161 |
hematopoietic stem cell | 3.37e-18 | 168 |
connective tissue cell | 8.26e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.50e-41 | 76 |
hematopoietic system | 1.65e-38 | 98 |
blood island | 1.65e-38 | 98 |
bone element | 7.16e-38 | 82 |
hemolymphoid system | 2.46e-34 | 108 |
skeletal element | 5.69e-34 | 90 |
immune system | 1.11e-32 | 93 |
skeletal system | 5.77e-30 | 100 |
lateral plate mesoderm | 1.09e-17 | 203 |
musculoskeletal system | 8.22e-17 | 167 |
mesoderm | 1.54e-10 | 315 |
mesoderm-derived structure | 1.54e-10 | 315 |
presumptive mesoderm | 1.54e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.