FFCP PHASE1:Hg19::chr10:102132666..102132669,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:102132666..102132669,+|id=chr10:102132666..102132669,+|ontology_enrichment_celltype=CL:0000066!1.13e-13!254;CL:0000548!4.74e-08!679;CL:0000004!4.74e-08!679;CL:0000255!4.74e-08!679;CL:0000012!1.04e-07!682;CL:0002076!4.57e-07!43;CL:0002368!4.79e-07!13|ontology_enrichment_celltype_v019=CL:0002328;5.05e-14;3!CL:0002202;2.42e-12;9!CL:0002632;2.42e-12;9!CL:0002368;5.90e-12;13!CL:0002076;2.52e-09;42!CL:0000307;4.78e-07;3|ontology_enrichment_celltype_v019_2=CL:0002328,4.28e-14,3;CL:0002076,2.38e-12,42;CL:0002202,2.40e-12,9;CL:0002632,2.40e-12,9;CL:0002368,5.77e-12,13;CL:0000066,5.60e-09,253;CL:0000223,2.98e-08,58;CL:0000068,5.32e-07,3;CL:0000069,5.32e-07,3;CL:0000307,5.32e-07,3;CL:0000377,5.32e-07,3|ontology_enrichment_development_v019=CL:0000377;4.78e-07;3|ontology_enrichment_disease=DOID:162!2.08e-19!235;DOID:14566!1.01e-18!239;DOID:0050687!4.77e-12!143;DOID:305!2.76e-10!106;DOID:0050686!1.89e-09!137|ontology_enrichment_disease_v019=DOID:1749;1.31e-10;14|ontology_enrichment_disease_v019_2=DOID:1749,7.87e-11,14|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004815;5.05e-14;3!UBERON:0002031;5.05e-14;3!UBERON:0000485;3.49e-10;7!UBERON:0002185;1.39e-08;5!UBERON:0007196;2.89e-07;15!UBERON:0001558;2.89e-07;15!UBERON:0000344;7.55e-07;20|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.28e-14,3;UBERON:0002031,4.28e-14,3;UBERON:0002185,1.26e-08,5;UBERON:0000485,6.27e-08,9;UBERON:0007196,2.88e-07,15;UBERON:0001558,2.88e-07,15;UBERON:0000344,7.00e-07,20|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,2.09340350391728,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0.821246550437305,0.125542639594803,0,0.164201178899891,0,0.786728553697808,0.383829398097213,0.464448369948228,3.67768489791571,1.50602959389125,4.06729411183466,0.309868802321207,0.284338464974843,0,1.10799081706375,0,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.175669571386252,0,0.364295288292542,0,0,0,0,0,0,0,0.596287222100115,1.72046919021225,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0.44905874525234,0.337834441449967,1.53316637465883,0,0.183201743930407,0,0,0.436094052142534,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0.561803226808994,0,0.245668634623536,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0.545492241181669,0,0.609868530647977,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0,0.474541238222193,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,0,0.502644862058154,1.01847289674383,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,1.16426079513703,1.74380363108377,0.766765358330422,0,0,0,0.144119953416961,0,0.063497894292169,0,1.17217447210047,0,0.102827492703324,0,0,0.224262168690721,0,0.36669142910475,0,0,0.845302752556,0,0,0.771622122786426,2.83698264046557,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0.508189248444927,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.657017248110473,0,0.348631135379878,0,0,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0,1.56869953835371,0,0.105551628892876,0,0.510281115829547,0,1.54227252690289,0.541892875087706,0,0.509752546090077,0,0.895499018888713,0,0,1.02580050046556,0.328014645699706,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0.462145851343933,0.307007349452259,0.551346289938122,0.214840489736547,0.435050081742686,0.340906509664404,0,0.330569830721956,0,3.44554323735377,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0.471249609382746,0,0,0,0.48763373908959,0,0,0.272999822815972,0,0,0,0,0,0,0,0.405820753925408,0,0.563391205064483,0.430234056612155,0,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.577332676353072,2.01090682660736,5.44454924306613,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,2.24330549367694,0,0.245040215981032,0.185803175125719,0,0.284567373393656,0.159426272728822,0,0,0.211673582723883,0,0,0,0.156679895773023,0,0.338583555603207,0.481764225311099,0.2017997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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:102132666..102132669,+ | |||
|id=chr10:102132666..102132669,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.13e-13!254;CL:0000548!4.74e-08!679;CL:0000004!4.74e-08!679;CL:0000255!4.74e-08!679;CL:0000012!1.04e-07!682;CL:0002076!4.57e-07!43;CL:0002368!4.79e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002328;5.05e-14;3!CL:0002202;2.42e-12;9!CL:0002632;2.42e-12;9!CL:0002368;5.90e-12;13!CL:0002076;2.52e-09;42!CL:0000307;4.78e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,4.28e-14,3;CL:0002076,2.38e-12,42;CL:0002202,2.40e-12,9;CL:0002632,2.40e-12,9;CL:0002368,5.77e-12,13;CL:0000066,5.60e-09,253;CL:0000223,2.98e-08,58;CL:0000068,5.32e-07,3;CL:0000069,5.32e-07,3;CL:0000307,5.32e-07,3;CL:0000377,5.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;4.78e-07;3 | |||
|ontology_enrichment_disease=DOID:162!2.08e-19!235;DOID:14566!1.01e-18!239;DOID:0050687!4.77e-12!143;DOID:305!2.76e-10!106;DOID:0050686!1.89e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.31e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,7.87e-11,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.05e-14;3!UBERON:0002031;5.05e-14;3!UBERON:0000485;3.49e-10;7!UBERON:0002185;1.39e-08;5!UBERON:0007196;2.89e-07;15!UBERON:0001558;2.89e-07;15!UBERON:0000344;7.55e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,4.28e-14,3;UBERON:0002031,4.28e-14,3;UBERON:0002185,1.26e-08,5;UBERON:0000485,6.27e-08,9;UBERON:0007196,2.88e-07,15;UBERON:0001558,2.88e-07,15;UBERON:0000344,7.00e-07,20 | |||
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| |||
|short_description=p@chr10:102132666..102132669,+ | |||
}} |
Revision as of 11:18, 10 September 2013
Short description: | p@chr10:102132666..102132669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:102132666..102132669, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 4.28e-14 | 3 |
endo-epithelial cell | 2.38e-12 | 42 |
epithelial cell of tracheobronchial tree | 2.40e-12 | 9 |
epithelial cell of lower respiratory tract | 2.40e-12 | 9 |
respiratory epithelial cell | 5.77e-12 | 13 |
epithelial cell | 5.60e-09 | 253 |
endodermal cell | 2.98e-08 | 58 |
duct epithelial cell | 5.32e-07 | 3 |
branched duct epithelial cell | 5.32e-07 | 3 |
tracheal epithelial cell | 5.32e-07 | 3 |
tracheoblast | 5.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 4.28e-14 | 3 |
epithelium of bronchus | 4.28e-14 | 3 |
bronchus | 1.26e-08 | 5 |
simple columnar epithelium | 6.27e-08 | 9 |
tracheobronchial tree | 2.88e-07 | 15 |
lower respiratory tract | 2.88e-07 | 15 |
mucosa | 7.00e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 7.87e-11 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.