FFCP PHASE1:Hg19::chr15:77197781..77197801,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=49855 | |EntrezGene=49855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13081 | |HGNC=13081 | ||
|TSSclassifier=S | |||
|UniProt=Q9BY12,Q6NSF1 | |UniProt=Q9BY12,Q6NSF1 | ||
|association_with_transcript=-37bp_to_ENST00000303521,uc002bbz.1,uc002bca.1,uc002bcb.1,uc002bcc.1_5end | |association_with_transcript=-37bp_to_ENST00000303521,uc002bbz.1,uc002bca.1,uc002bcb.1,uc002bcc.1_5end | ||
Revision as of 22:46, 6 July 2013
| Short description: | p3@SCAPER |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_SCAPER_5end |
| Coexpression cluster: | C3375_testis_parietal_brain_occipital_temporal_cerebellum_duodenum |
| Association with transcript: | -37bp_to_ENST00000303521, uc002bbz.1, uc002bca.1, uc002bcb.1, uc002bcc.1_5end |
| EntrezGene: | SCAPER |
| HGNC: | 13081 |
| UniProt: | Q9BY12Q6NSF1 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p3@SCAPER |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| natural killer cell | 4.63e-07 | 3 |
| pro-NK cell | 4.63e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 3.27e-61 | 56 |
| neural rod | 3.27e-61 | 56 |
| future spinal cord | 3.27e-61 | 56 |
| neural keel | 3.27e-61 | 56 |
| regional part of nervous system | 2.22e-55 | 53 |
| regional part of brain | 2.22e-55 | 53 |
| central nervous system | 7.51e-47 | 81 |
| regional part of forebrain | 2.14e-45 | 41 |
| forebrain | 2.14e-45 | 41 |
| anterior neural tube | 2.14e-45 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
