FFCP PHASE1:Hg19::chr13:47471155..47471214,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3356 | |EntrezGene=3356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5293 | |HGNC=5293 | ||
|TSSclassifier=S | |||
|UniProt=F5GWE8,P28223,B4DZ79 | |UniProt=F5GWE8,P28223,B4DZ79 | ||
|association_with_transcript=0bp_to_ENST00000542664,ENST00000543956,NM_000621,NM_001165947_5end | |association_with_transcript=0bp_to_ENST00000542664,ENST00000543956,NM_000621,NM_001165947_5end | ||
Revision as of 15:58, 6 July 2013
| Short description: | p1@HTR2A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_HTR2A_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000542664, ENST00000543956, NM_000621, NM_001165947_5end |
| EntrezGene: | HTR2A |
| HGNC: | 5293 |
| UniProt: | F5GWE8P28223B4DZ79 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HTR2A |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| omentum preadipocyte | 4.24e-07 | 3 |
| preadipocyte of the breast | 5.73e-07 | 3 |
| adipocyte of omentum tissue | 5.96e-07 | 3 |
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 5.02e-44 | 56 |
| neural rod | 5.02e-44 | 56 |
| future spinal cord | 5.02e-44 | 56 |
| neural keel | 5.02e-44 | 56 |
| regional part of nervous system | 3.16e-42 | 53 |
| regional part of brain | 3.16e-42 | 53 |
| telencephalon | 1.32e-40 | 34 |
| cerebral hemisphere | 1.75e-40 | 32 |
| brain grey matter | 3.11e-40 | 34 |
| gray matter | 3.11e-40 | 34 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
