FFCP PHASE1:Hg19::chr10:69455965..69455974,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=29119 | |EntrezGene=29119 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2511 | |HGNC=2511 | ||
|TSSclassifier=S | |||
|UniProt=A8K141,Q9UI47 | |UniProt=A8K141,Q9UI47 | ||
|association_with_transcript=-16bp_to_NM_013266,uc001jmw.2_5end | |association_with_transcript=-16bp_to_NM_013266,uc001jmw.2_5end |
Revision as of 01:51, 6 July 2013
Short description: | p6@CTNNA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CTNNA3_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | -16bp_to_NM_013266, uc001jmw.2_5end |
EntrezGene: | CTNNA3 |
HGNC: | 2511 |
UniProt: | A8K141Q9UI47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@CTNNA3 |
---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 1.01e-38 | 3 |
primary circulatory organ | 7.95e-38 | 27 |
heart left ventricle | 9.99e-30 | 1 |
cardiac ventricle | 9.99e-30 | 1 |
future cardiac ventricle | 9.99e-30 | 1 |
left cardiac atrium | 1.33e-29 | 1 |
pulmonary valve | 2.37e-29 | 1 |
semi-lunar valve | 2.37e-29 | 1 |
heart | 1.92e-19 | 24 |
primitive heart tube | 1.92e-19 | 24 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
heart disease | 8.47e-57 | 2 |
vascular disease | 1.78e-29 | 1 |
ischemia | 1.78e-29 | 1 |
extrinsic cardiomyopathy | 1.78e-29 | 1 |
myocardial ischemia | 1.78e-29 | 1 |
myocardial infarction | 1.78e-29 | 1 |
cardiovascular system disease | 4.86e-29 | 4 |
Showing 1 to 7 of 7 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.