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Revision as of 10:21, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant105
  • db :SWISSREGULON
  • Id :ZBTB6.p2
  • name :ZBTB6
  • score :0.9547179249257121
  • External refs:
EntrezGene:ZBTB6
UniProt:ZBTB6

  • Internal refs:
EntrezGene:ZBTB6


Motif matrix
P0ACGT
112.7569577.46015921.48530237.261027
28.8301292.961378136.1928440.979087
300.976179137.27076910.71649
40148.96343800
52.9312640.9584732.977262142.096439
60147.0315901.931848
70123.45013025.513308
8132.2078387.869244.9405043.945856
90.98856111.79055246.04325490.141071
100.975995104.84243934.3130178.831987
1159.88888032.28596956.788589
12099.793419049.170019
133.908848132.3212127.8450914.888287

Sub Motif Members