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Revision as of 09:49, 30 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant94
  • db :JASPAR
  • Id :MA0155.1
  • name :INSM1
  • score :1.1586054937537869
  • External refs:
EntrezGene:3642
UniProt:3642

  • Internal refs:
EntrezGene:3642


Motif matrix
P0ACGT
110419
200204
308313
461503
516008
600240
701230
800240
900240
1002166
1131605
12100122

Sub Motif Members