NonredundantMotifs:40

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant40
• db :HOCOMOCO
• Id :SMAD3_f1
• name  :
• score :0.09834004578654876
  
• External refs:

EntrezGene:4088
UniProt:4088

• Internal refs:

EntrezGene:4088

Motif matrix

P0 A C G T 1 13.172006745362548 17.973018549747092 31.637436762226013 10.217537942664446 2 15.757166947723478 8.863406408094452 7.016863406408105 41.36256323777408 3 0.9848229342327128 6.647554806070832 63.39797639123109 1.969645868465433 4 0.0 0.0 7.139966273187192 65.86003372681289 5 0.0 72.01517706576735 0.0 0.9848229342327128 6 3.446880269814506 1.8465430016863467 0.9848229342327128 66.7217537942665 7 7.632377740303588 0.0 60.56661045531204 4.801011804384492 8 7.509274873524458 15.38785834738616 32.00674536256333 18.09612141652615 9 16.249578414839778 40.13153456998315 10.340640809443503 6.278246205733565 10 7.139966273187192 28.80607082630697 11.940978077571685 25.11298482293423