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NonredundantMotifs:149: Difference between revisions

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|entrez_gene_id=79842
|entrez_gene_id=79842
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09
|motif_cluster_2013_march_motif_members= /UNIPROBE:Zbtb3_secondary;SCI09
|name=known149
|name=non-redundant149
|representative_motif_db=UNIPROBE
|representative_motif_db=UNIPROBE
|representative_motif_id=Zbtb3_secondary
|representative_motif_id=Zbtb3_secondary
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[[Category:Motif]]
[[Category:Motif]]
[[Category:MotifCluster2013March]]
[[Category:MotifCluster2013March]]
[[Category:NonRedundantMotifCluster]]

Revision as of 16:47, 29 May 2013

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

  • Name :non-redundant149
  • db :UNIPROBE
  • Id :Zbtb3_secondary
  • name :SCI09
  • score :0.06986552910323922
  • External refs:
EntrezGene:79842
UniProt:79842

  • Internal refs:
EntrezGene:79842


Motif matrix
P0ACGT
10.1104118246193120.5199095140210340.1623984322564920.207280229103162
20.4705932727467970.1728929535550760.1152023939548770.24131137974325
30.4671261382770540.1601751274515260.2273649510882620.145333783183157
40.1961115558016880.1698552373916590.07906788412134350.55496532268531
50.1982754192991050.6713934512865890.02609386441030510.104237265004001
60.7934648166205910.04673876666938910.1102581021308010.0495383145792191
70.05820351179885560.8675486080823310.04560316540862240.0286447147101911
80.07947137073683890.02748354064281970.0252483819839320.867796706636409
90.03227682536852620.06589334203308970.8274171683173750.0744126642810091
100.08055298400865980.1191444952345880.5850495823221540.215252938434598
110.1051059367648870.470207704447390.1709211572922320.253765201495491
120.6901577982045640.03392543161044220.1711205210120610.104796249172932
130.2995427010207790.1558902596955910.3625861842571140.181980855026516
140.3433751809377290.2133597744397310.1800671900784010.263197854544139
150.3648193705744540.149052906403120.1811281801209450.304999542901481
160.2478176090283640.1439482399958350.2178820747788630.390352076196938

Sub Motif Members