NonredundantMotifs:94: Difference between revisions
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|PWM=P0;A;C;G;T!1;1;0;4;19!2;0;0;20;4!3;0;8;3;13!4;6;15;0;3!5;16;0;0;8!6;0;0;24;0!7;0;1;23;0!8;0;0;24;0!9;0;0;24;0!10;0;2;16;6!11;3;16;0;5!12;10;0;12;2 | |PWM=P0;A;C;G;T!1;1;0;4;19!2;0;0;20;4!3;0;8;3;13!4;6;15;0;3!5;16;0;0;8!6;0;0;24;0!7;0;1;23;0!8;0;0;24;0!9;0;0;24;0!10;0;2;16;6!11;3;16;0;5!12;10;0;12;2 | ||
|entrez_gene_id=3642 | |entrez_gene_id=3642 | ||
|motif_cluster_2013_march_motif_members= /JASPAR:MA0155.1; | |motif_cluster_2013_march_motif_members= /HOCOMOCO:INSM1_f1 /JASPAR:MA0155.1;INSM1 | ||
|name= | |name=non-redundant94 | ||
|representative_motif_db=JASPAR | |representative_motif_db=JASPAR | ||
|representative_motif_id=MA0155.1 | |representative_motif_id=MA0155.1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Revision as of 16:47, 29 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant94
- db :JASPAR
- Id :MA0155.1
- name :INSM1
- score :1.1586054937537869
- External refs:
- Internal refs:
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Sub Motif Members
