NonredundantMotifs:177: Difference between revisions
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|entrez_gene_id=10002
|motif_cluster_2013_march_motif_members= /HOCOMOCO:NR2E3_f1
|name=known177
|representative_motif_db=HOCOMOCO
|representative_motif_id...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;11.340840840840839;3.500000000000001;4.277777777777784;3.500000000000001!2;18.72972972972973;1.5555555555555542;1.5555555555555542;0.7777777777777761!3;17.762762762762762;0.7777777777777761;3.3003003003002984;0.7777777777777761!4;1.5555555555555542;1.5555555555555542;16.396396396396383;3.1111111111111085!5;1.5555555555555542;0.0;2.3333333333333264;18.72972972972973!6;1.5555555555555542;20.285285285285273;0.7777777777777761;0.0!7;21.06306306306306;0.0;0.7777777777777761;0.7777777777777761!8;17.95195195195195;3.1111111111111085;1.5555555555555542;0.0!9;21.84084084084084;0.0;0.0;0.7777777777777761!10;18.54054054054052;0.0;3.3003003003002984;0.7777777777777761!11;5.633633633633624;1.5555555555555542;13.873873873873867;1.5555555555555542!12;0.7777777777777761;1.5555555555555542;4.666666666666653;15.6186186186186!13;3.1111111111111085;15.6186186186186;2.3333333333333264;1.5555555555555542!14;16.590840840840826;3.305555555555555;1.7499999999999978;0.9722222222222218 | |||
|entrez_gene_id=10002 | |entrez_gene_id=10002 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:NR2E3_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:NR2E3_f1 | ||
Revision as of 10:48, 13 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :known177
- db :HOCOMOCO
- Id :NR2E3_f1
- name :
- score :0.11236361080472342
- External refs:
- Internal refs:
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Sub Motif Members
