NonredundantMotifs:141

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known141
• db :HOCOMOCO
• Id :HXD10_f1
• name  :
• score :0.06750610317469286
  
• External refs:

EntrezGene:3236
UniProt:3236

• Internal refs:

EntrezGene:3236

Motif matrix

P0 A C G T 1 1.075302761404095 0.2150605522808183 0.2150605522808183 5.494576134034267 2 1.7204844182465449 0.0 5.279515581753448 0.0 3 0.860242209123276 3.559031163506903 0.860242209123276 1.7204844182465449 4 0.860242209123276 0.0 0.0 6.139757790876724 5 0.860242209123276 1.838546745260358 0.0 4.301211045616373 6 0.0 0.0 0.0 7.0 7 4.419273372630179 0.0 0.860242209123276 1.7204844182465449 8 4.301211045616373 0.0 1.838546745260358 0.860242209123276 9 0.0 0.0 0.0 7.0 10 0.2150605522808183 0.2150605522808183 1.935544970527364 4.634333924910998