FFCP PHASE1:Hg19::chrX:55620448..55620457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |EntrezGene=139628 | ||
|HGNC=NA | |HGNC=NA | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|coexpression_cluster_id=C2959 | |coexpression_cluster_id=C2959 | ||
|description= | |description=CAGE_peak_4_at_FOXR2_5end | ||
|id=chrX:55620448..55620457,+ | |id=chrX:55620448..55620457,+ | ||
|ontology_enrichment_celltype=CL:0002178!6.14e-07!3;CL:0000322!7.70e-07!3 | |ontology_enrichment_celltype=CL:0002178!6.14e-07!3;CL:0000322!7.70e-07!3 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5 | |ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3;UBERON:0002046,7.01e-08,5;UBERON:0004117,7.01e-08,5;UBERON:0007689,7.01e-08,5;UBERON:0007123,7.01e-08,5;UBERON:0003091,7.01e-08,5 | ||
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|short_description= | |short_description=p4@FOXR2 | ||
}} | }} |
Revision as of 20:04, 22 November 2012
Short description: | p4@FOXR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_FOXR2_5end |
Coexpression cluster: | C2959_fibrosarcoma_gastric_teratocarcinoma_thyroid_bronchioalveolar_pagetoid_adult |
Association with transcript: | NA |
EntrezGene: | FOXR2 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.07e-12 | 3 |
pneumocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
thyroid gland | 7.01e-08 | 5 |
pharyngeal pouch | 7.01e-08 | 5 |
thyroid diverticulum | 7.01e-08 | 5 |
pharyngeal pouch 2 | 7.01e-08 | 5 |
thyroid primordium | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 7.49e-08 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.