FFCP PHASE1:Hg19::chr12:8044956..8044963,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |EntrezGene=404635 | ||
|HGNC=NA | |HGNC=NA | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|coexpression_cluster_id=C45 | |coexpression_cluster_id=C45 | ||
|description= | |description=CAGE_peak_6_at_NANOGP1_5end | ||
|id=chr12:8044956..8044963,+ | |id=chr12:8044956..8044963,+ | ||
|ontology_enrichment_celltype=CL:0000039!6.12e-51!7;CL:0000586!6.12e-51!7;CL:0002322!1.11e-39!5;CL:0000540!1.41e-15!6;CL:0000031!1.41e-15!6;CL:0000404!1.41e-15!6;CL:0000047!6.16e-12!8;CL:0000148!1.01e-09!10;CL:0000541!1.01e-09!10;CL:0000147!3.34e-07!14 | |ontology_enrichment_celltype=CL:0000039!6.12e-51!7;CL:0000586!6.12e-51!7;CL:0002322!1.11e-39!5;CL:0000540!1.41e-15!6;CL:0000031!1.41e-15!6;CL:0000404!1.41e-15!6;CL:0000047!6.16e-12!8;CL:0000148!1.01e-09!10;CL:0000541!1.01e-09!10;CL:0000147!3.34e-07!14 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | ||
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|short_description= | |short_description=p6@NANOGP1 | ||
}} | }} |
Revision as of 20:01, 22 November 2012
Short description: | p6@NANOGP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_NANOGP1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | NA |
EntrezGene: | NANOGP1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.