FFCP PHASE1:Hg19::chr1:159796094..159796108,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002194!4.78e-25!63;CL:0000576!4.78e-25!63;CL:0000040!4.78e-25!63;CL:0000559!4.78e-25!63;CL:0002009!3.97e-24!65;CL:0000839!4.67e-22!70;CL:0000557!1.12e-21!71;CL:0000766!6.27e-20!76;CL:0002619!2.86e-14!3;CL:0002087!1.49e-13!119;CL:0002031!8.64e-13!124;CL:0000763!6.03e-12!112;CL:0000049!6.03e-12!112;CL:0000235!4.51e-11!10;CL:0000738!1.02e-10!140;CL:0002057!2.30e-08!42;CL:0002032!2.64e-08!165;CL:0000837!2.64e-08!165;CL:0000037!9.26e-08!172;CL:0000566!9.26e-08!172;CL:0000860!1.11e-07!45;CL:0000988!4.68e-07!182;CL:0000840!5.39e-07!5;CL:0001029!5.39e-07!5 | |ontology_enrichment_celltype=CL:0002194!4.78e-25!63;CL:0000576!4.78e-25!63;CL:0000040!4.78e-25!63;CL:0000559!4.78e-25!63;CL:0002009!3.97e-24!65;CL:0000839!4.67e-22!70;CL:0000557!1.12e-21!71;CL:0000766!6.27e-20!76;CL:0002619!2.86e-14!3;CL:0002087!1.49e-13!119;CL:0002031!8.64e-13!124;CL:0000763!6.03e-12!112;CL:0000049!6.03e-12!112;CL:0000235!4.51e-11!10;CL:0000738!1.02e-10!140;CL:0002057!2.30e-08!42;CL:0002032!2.64e-08!165;CL:0000837!2.64e-08!165;CL:0000037!9.26e-08!172;CL:0000566!9.26e-08!172;CL:0000860!1.11e-07!45;CL:0000988!4.68e-07!182;CL:0000840!5.39e-07!5;CL:0001029!5.39e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.43e-49;6!CL:0002619;3.16e-36;3!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.54e-19;48!CL:0000860;3.35e-15;33!CL:0002057;3.35e-15;33!CL:0000766;7.09e-14;69!CL:0000763;1.91e-09;100!CL:0000840;1.04e-08;5!CL:0000738;7.22e-08;136 | |ontology_enrichment_celltype_v019=CL:0000235;6.43e-49;6!CL:0002619;3.16e-36;3!CL:0000473;1.31e-33;39!CL:0000234;1.31e-33;39!CL:0000576;6.54e-19;48!CL:0000860;3.35e-15;33!CL:0002057;3.35e-15;33!CL:0000766;7.09e-14;69!CL:0000763;1.91e-09;100!CL:0000840;1.04e-08;5!CL:0000738;7.22e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.04e-54,59;CL:0000576,3.04e-54,59;CL:0000040,3.04e-54,59;CL:0000559,3.04e-54,59;CL:0002009,1.94e-52,61;CL:0000235,3.92e-49,6;CL:0000839,2.12e-48,66;CL:0000557,1.16e-47,67;CL:0000766,2.79e-44,72;CL:0002619,2.65e-36,3;CL:0000473,2.07e-33,48;CL:0000234,2.07e-33,48;CL:0000763,4.54e-29,108;CL:0000049,4.54e-29,108;CL:0002087,3.33e-27,115;CL:0002031,5.28e-26,120;CL:0000738,9.52e-23,136;CL:0002032,6.10e-19,161;CL:0000837,6.10e-19,161;CL:0000037,4.47e-18,168;CL:0000988,4.61e-17,177;CL:0000860,6.22e-13,42;CL:0002057,6.22e-13,42;CL:0000840,1.17e-08,5;CL:0001029,1.17e-08,5;CL:0000134,1.68e-07,354;CL:0002320,2.59e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-10;42!CL:0000049;7.72e-10;108 | |ontology_enrichment_development_v019=CL:0002057;1.95e-10;42!CL:0000049;7.72e-10;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.10e-18!80;UBERON:0002193!8.88e-18!112;UBERON:0002405!3.68e-17!115;UBERON:0001474!4.86e-17!86;UBERON:0002390!1.13e-16!102;UBERON:0003061!1.13e-16!102;UBERON:0004765!8.87e-14!101;UBERON:0001434!8.87e-14!101;UBERON:0002204!3.63e-08!167;UBERON:0003081!3.06e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!1.10e-18!80;UBERON:0002193!8.88e-18!112;UBERON:0002405!3.68e-17!115;UBERON:0001474!4.86e-17!86;UBERON:0002390!1.13e-16!102;UBERON:0003061!1.13e-16!102;UBERON:0004765!8.87e-14!101;UBERON:0001434!8.87e-14!101;UBERON:0002204!3.63e-08!167;UBERON:0003081!3.06e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.85e-42,76;UBERON:0001474,9.77e-39,82;UBERON:0004765,3.55e-35,90;UBERON:0002405,5.37e-34,93;UBERON:0002390,3.45e-32,98;UBERON:0003061,3.45e-32,98;UBERON:0001434,1.63e-31,100;UBERON:0002193,4.54e-29,108;UBERON:0002204,3.40e-18,167;UBERON:0003081,1.24e-14,203;UBERON:0000926,1.06e-08,315;UBERON:0004120,1.06e-08,315;UBERON:0006603,1.06e-08,315;UBERON:0002384,4.69e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,4.47830948479849,4.21061765824673,4.63636021741536,0,0,0,0,0,0,4.02769349251011,2.56160706529101,4.25668013799453,0,0,0,0,0,0,0,0,0,2.96866170168044,0.797854630486527,2.13112375266347,0,0,0,0.75374599577023,2.08593167368081,1.95469960234605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0.324547393654683,1.74129737299267,4.12169677608482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,6.08411089362018,4.90482835552803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,4.47830948479849,4.21061765824673,4.63636021741536,0,0,0,0,0,0,4.02769349251011,2.56160706529101,4.25668013799453,0,0,0,0,0,0,0,0,0,2.96866170168044,0.797854630486527,2.13112375266347,0,0,0,0.75374599577023,2.08593167368081,1.95469960234605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0.196468613246569,0,0,0.324547393654683,1.74129737299267,4.12169677608482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,6.08411089362018,4.90482835552803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52031382288914,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0.659215496907038,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.134704106029175,0.143444410785353,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr1:159796094..159796108,- | |short_description=p@chr1:159796094..159796108,- | ||
}} | }} |
Revision as of 11:09, 21 November 2012
Short description: | p@chr1:159796094..159796108, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:159796094..159796108, - |
Coexpression cluster: | C1153_Monocytederived_CD14_Dendritic_Macrophage_acute_spleen_lymph |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.04e-54 | 59 |
monocyte | 3.04e-54 | 59 |
monoblast | 3.04e-54 | 59 |
promonocyte | 3.04e-54 | 59 |
macrophage dendritic cell progenitor | 1.94e-52 | 61 |
macrophage | 3.92e-49 | 6 |
myeloid lineage restricted progenitor cell | 2.12e-48 | 66 |
granulocyte monocyte progenitor cell | 1.16e-47 | 67 |
myeloid leukocyte | 2.79e-44 | 72 |
adult endothelial progenitor cell | 2.65e-36 | 3 |
defensive cell | 2.07e-33 | 48 |
phagocyte | 2.07e-33 | 48 |
myeloid cell | 4.54e-29 | 108 |
common myeloid progenitor | 4.54e-29 | 108 |
nongranular leukocyte | 3.33e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 5.28e-26 | 120 |
leukocyte | 9.52e-23 | 136 |
hematopoietic oligopotent progenitor cell | 6.10e-19 | 161 |
hematopoietic multipotent progenitor cell | 6.10e-19 | 161 |
hematopoietic stem cell | 4.47e-18 | 168 |
hematopoietic cell | 4.61e-17 | 177 |
classical monocyte | 6.22e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.22e-13 | 42 |
immature conventional dendritic cell | 1.17e-08 | 5 |
common dendritic progenitor | 1.17e-08 | 5 |
mesenchymal cell | 1.68e-07 | 354 |
connective tissue cell | 2.59e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.85e-42 | 76 |
bone element | 9.77e-39 | 82 |
skeletal element | 3.55e-35 | 90 |
immune system | 5.37e-34 | 93 |
hematopoietic system | 3.45e-32 | 98 |
blood island | 3.45e-32 | 98 |
skeletal system | 1.63e-31 | 100 |
hemolymphoid system | 4.54e-29 | 108 |
musculoskeletal system | 3.40e-18 | 167 |
lateral plate mesoderm | 1.24e-14 | 203 |
mesoderm | 1.06e-08 | 315 |
mesoderm-derived structure | 1.06e-08 | 315 |
presumptive mesoderm | 1.06e-08 | 315 |
connective tissue | 4.69e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.