FFCP PHASE1:Hg19::chr8:101322154..101322207,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002031!7.66e-16!124;CL:0000738!1.82e-15!140;CL:0000839!3.53e-14!70;CL:0000557!6.34e-14!71;CL:0000766!1.88e-13!76;CL:0002087!3.11e-13!119;CL:0002009!1.25e-12!65;CL:0000037!5.33e-12!172;CL:0000566!5.33e-12!172;CL:0002194!9.79e-12!63;CL:0000576!9.79e-12!63;CL:0000040!9.79e-12!63;CL:0000559!9.79e-12!63;CL:0000988!3.77e-11!182;CL:0002032!2.09e-10!165;CL:0000837!2.09e-10!165;CL:0000860!1.70e-09!45;CL:0002057!2.32e-09!42;CL:0000763!1.72e-08!112;CL:0000049!1.72e-08!112 | |ontology_enrichment_celltype=CL:0002031!7.66e-16!124;CL:0000738!1.82e-15!140;CL:0000839!3.53e-14!70;CL:0000557!6.34e-14!71;CL:0000766!1.88e-13!76;CL:0002087!3.11e-13!119;CL:0002009!1.25e-12!65;CL:0000037!5.33e-12!172;CL:0000566!5.33e-12!172;CL:0002194!9.79e-12!63;CL:0000576!9.79e-12!63;CL:0000040!9.79e-12!63;CL:0000559!9.79e-12!63;CL:0000988!3.77e-11!182;CL:0002032!2.09e-10!165;CL:0000837!2.09e-10!165;CL:0000860!1.70e-09!45;CL:0002057!2.32e-09!42;CL:0000763!1.72e-08!112;CL:0000049!1.72e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-10;33!CL:0002057;1.03e-10;33!CL:0000473;2.08e-09;39!CL:0000234;2.08e-09;39!CL:0000576;1.89e-07;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.03e-10;33!CL:0002057;1.03e-10;33!CL:0000473;2.08e-09;39!CL:0000234;2.08e-09;39!CL:0000576;1.89e-07;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.18e-15,120;CL:0000738,2.97e-15,136;CL:0000839,3.80e-14,66;CL:0000557,7.02e-14,67;CL:0000766,2.26e-13,72;CL:0002087,4.87e-13,115;CL:0002009,1.39e-12,61;CL:0000037,9.34e-12,168;CL:0002194,1.12e-11,59;CL:0000576,1.12e-11,59;CL:0000040,1.12e-11,59;CL:0000559,1.12e-11,59;CL:0000988,3.26e-11,177;CL:0002032,3.59e-10,161;CL:0000837,3.59e-10,161;CL:0000473,7.86e-10,48;CL:0000234,7.86e-10,48;CL:0000860,2.32e-09,42;CL:0002057,2.32e-09,42;CL:0000763,2.77e-08,108;CL:0000049,2.77e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-07;42 | |ontology_enrichment_development_v019=CL:0002057;1.92e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.97e-14!115;UBERON:0002193!2.41e-14!112;UBERON:0002390!2.78e-14!102;UBERON:0003061!2.78e-14!102;UBERON:0002371!3.43e-11!80;UBERON:0002405!8.30e-11!115;UBERON:0001474!9.56e-10!86;UBERON:0001893!2.73e-09!34;UBERON:0002020!4.00e-09!34;UBERON:0003528!4.00e-09!34;UBERON:0002791!4.35e-09!33;UBERON:0001869!6.23e-09!32;UBERON:0003080!6.46e-09!42;UBERON:0004765!9.58e-09!101;UBERON:0001434!9.58e-09!101;UBERON:0002780!1.44e-08!41;UBERON:0001890!1.44e-08!41;UBERON:0006240!1.44e-08!41;UBERON:0001049!1.66e-08!57;UBERON:0005068!1.66e-08!57;UBERON:0006241!1.66e-08!57;UBERON:0007135!1.66e-08!57;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0002619!3.77e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!1.97e-14!115;UBERON:0002193!2.41e-14!112;UBERON:0002390!2.78e-14!102;UBERON:0003061!2.78e-14!102;UBERON:0002371!3.43e-11!80;UBERON:0002405!8.30e-11!115;UBERON:0001474!9.56e-10!86;UBERON:0001893!2.73e-09!34;UBERON:0002020!4.00e-09!34;UBERON:0003528!4.00e-09!34;UBERON:0002791!4.35e-09!33;UBERON:0001869!6.23e-09!32;UBERON:0003080!6.46e-09!42;UBERON:0004765!9.58e-09!101;UBERON:0001434!9.58e-09!101;UBERON:0002780!1.44e-08!41;UBERON:0001890!1.44e-08!41;UBERON:0006240!1.44e-08!41;UBERON:0001049!1.66e-08!57;UBERON:0005068!1.66e-08!57;UBERON:0006241!1.66e-08!57;UBERON:0007135!1.66e-08!57;UBERON:0000956!1.29e-07!25;UBERON:0000203!1.29e-07!25;UBERON:0002619!3.77e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.12e-08;32!UBERON:0002791;3.45e-08;32!UBERON:0001893;4.37e-08;34!UBERON:0003528;4.61e-08;34!UBERON:0002020;4.61e-08;34!UBERON:0000956;1.24e-07;25!UBERON:0000203;1.24e-07;25!UBERON:0002619;3.76e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001869;3.12e-08;32!UBERON:0002791;3.45e-08;32!UBERON:0001893;4.37e-08;34!UBERON:0003528;4.61e-08;34!UBERON:0002020;4.61e-08;34!UBERON:0000956;1.24e-07;25!UBERON:0000203;1.24e-07;25!UBERON:0002619;3.76e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.61e-14,108;UBERON:0002390,3.95e-14,98;UBERON:0003061,3.95e-14,98;UBERON:0007023,4.73e-14,114;UBERON:0002405,2.31e-12,93;UBERON:0002371,4.71e-11,76;UBERON:0001474,1.42e-09,82;UBERON:0001893,2.73e-09,34;UBERON:0003528,4.00e-09,34;UBERON:0002020,4.00e-09,34;UBERON:0001869,6.23e-09,32;UBERON:0002791,7.91e-09,32;UBERON:0004765,7.98e-09,90;UBERON:0002780,1.44e-08,41;UBERON:0001890,1.44e-08,41;UBERON:0003080,1.44e-08,41;UBERON:0006240,1.44e-08,41;UBERON:0001049,3.45e-08,56;UBERON:0005068,3.45e-08,56;UBERON:0006241,3.45e-08,56;UBERON:0007135,3.45e-08,56;UBERON:0001434,7.04e-08,100;UBERON:0000956,1.29e-07,25;UBERON:0000203,1.29e-07,25;UBERON:0000073,2.60e-07,53;UBERON:0002616,2.60e-07,53;UBERON:0002619,3.77e-07,22 | |||
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| ||
|short_description=p1@RNF19A | |short_description=p1@RNF19A | ||
}} | }} |
Revision as of 06:24, 21 November 2012
Short description: | p1@RNF19A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RNF19A_5end |
Coexpression cluster: | C4712_Mast_clear_cord_immature_lung_Reticulocytes_CD8 |
Association with transcript: | -16bp_to_ENST00000523481_5end |
EntrezGene: | RNF19A |
HGNC: | 13432 |
UniProt: | E5RJH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.18e-15 | 120 |
leukocyte | 2.97e-15 | 136 |
myeloid lineage restricted progenitor cell | 3.80e-14 | 66 |
granulocyte monocyte progenitor cell | 7.02e-14 | 67 |
myeloid leukocyte | 2.26e-13 | 72 |
nongranular leukocyte | 4.87e-13 | 115 |
macrophage dendritic cell progenitor | 1.39e-12 | 61 |
hematopoietic stem cell | 9.34e-12 | 168 |
monopoietic cell | 1.12e-11 | 59 |
monocyte | 1.12e-11 | 59 |
monoblast | 1.12e-11 | 59 |
promonocyte | 1.12e-11 | 59 |
hematopoietic cell | 3.26e-11 | 177 |
hematopoietic oligopotent progenitor cell | 3.59e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.59e-10 | 161 |
defensive cell | 7.86e-10 | 48 |
phagocyte | 7.86e-10 | 48 |
classical monocyte | 2.32e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.32e-09 | 42 |
myeloid cell | 2.77e-08 | 108 |
common myeloid progenitor | 2.77e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.61e-14 | 108 |
hematopoietic system | 3.95e-14 | 98 |
blood island | 3.95e-14 | 98 |
adult organism | 4.73e-14 | 114 |
immune system | 2.31e-12 | 93 |
bone marrow | 4.71e-11 | 76 |
bone element | 1.42e-09 | 82 |
telencephalon | 2.73e-09 | 34 |
brain grey matter | 4.00e-09 | 34 |
gray matter | 4.00e-09 | 34 |
cerebral hemisphere | 6.23e-09 | 32 |
regional part of telencephalon | 7.91e-09 | 32 |
skeletal element | 7.98e-09 | 90 |
regional part of forebrain | 1.44e-08 | 41 |
forebrain | 1.44e-08 | 41 |
anterior neural tube | 1.44e-08 | 41 |
future forebrain | 1.44e-08 | 41 |
neural tube | 3.45e-08 | 56 |
neural rod | 3.45e-08 | 56 |
future spinal cord | 3.45e-08 | 56 |
neural keel | 3.45e-08 | 56 |
skeletal system | 7.04e-08 | 100 |
cerebral cortex | 1.29e-07 | 25 |
pallium | 1.29e-07 | 25 |
regional part of nervous system | 2.60e-07 | 53 |
regional part of brain | 2.60e-07 | 53 |
regional part of cerebral cortex | 3.77e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.