FFCP PHASE1:Hg19::chr3:197282821..197282869,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000542!8.04e-09!53;CL:0000051!8.04e-09!53;CL:0000838!1.76e-08!52 | |ontology_enrichment_celltype=CL:0000542!8.04e-09!53;CL:0000051!8.04e-09!53;CL:0000838!1.76e-08!52 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.15e-09,53;CL:0000051,6.15e-09,53;CL:0000838,1.35e-08,52 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!1.30e-08!51;DOID:0060083!1.30e-08!51;DOID:1240!2.16e-08!39;DOID:8692!8.16e-07!31 | |ontology_enrichment_disease=DOID:2531!1.30e-08!51;DOID:0060083!1.30e-08!51;DOID:1240!2.16e-08!39;DOID:8692!8.16e-07!31 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.27e-09,51;DOID:0060083,7.27e-09,51;DOID:1240,1.26e-08,39;DOID:8692,4.83e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.10e-19!115;UBERON:0001049!1.41e-14!57;UBERON:0005068!1.41e-14!57;UBERON:0006241!1.41e-14!57;UBERON:0007135!1.41e-14!57;UBERON:0002616!3.12e-12!59;UBERON:0003080!1.01e-11!42;UBERON:0002780!1.19e-11!41;UBERON:0001890!1.19e-11!41;UBERON:0006240!1.19e-11!41;UBERON:0000955!2.46e-11!69;UBERON:0006238!2.46e-11!69;UBERON:0001893!5.62e-11!34;UBERON:0001869!6.28e-11!32;UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0000073!1.89e-10!94;UBERON:0001016!1.89e-10!94;UBERON:0002791!1.95e-10!33;UBERON:0002346!2.72e-10!90;UBERON:0003075!4.18e-10!86;UBERON:0007284!4.18e-10!86;UBERON:0001017!4.55e-10!82;UBERON:0000153!7.44e-10!129;UBERON:0007811!7.44e-10!129;UBERON:0005743!1.43e-09!86;UBERON:0000924!1.72e-09!173;UBERON:0006601!1.72e-09!173;UBERON:0002619!2.30e-09!22;UBERON:0004121!3.02e-09!169;UBERON:0003056!5.64e-09!61;UBERON:0000064!6.00e-09!219;UBERON:0000033!9.25e-09!123;UBERON:0001950!9.63e-09!20;UBERON:0000956!1.70e-08!25;UBERON:0000203!1.70e-08!25 | |ontology_enrichment_uberon=UBERON:0007023!9.10e-19!115;UBERON:0001049!1.41e-14!57;UBERON:0005068!1.41e-14!57;UBERON:0006241!1.41e-14!57;UBERON:0007135!1.41e-14!57;UBERON:0002616!3.12e-12!59;UBERON:0003080!1.01e-11!42;UBERON:0002780!1.19e-11!41;UBERON:0001890!1.19e-11!41;UBERON:0006240!1.19e-11!41;UBERON:0000955!2.46e-11!69;UBERON:0006238!2.46e-11!69;UBERON:0001893!5.62e-11!34;UBERON:0001869!6.28e-11!32;UBERON:0002020!1.54e-10!34;UBERON:0003528!1.54e-10!34;UBERON:0000073!1.89e-10!94;UBERON:0001016!1.89e-10!94;UBERON:0002791!1.95e-10!33;UBERON:0002346!2.72e-10!90;UBERON:0003075!4.18e-10!86;UBERON:0007284!4.18e-10!86;UBERON:0001017!4.55e-10!82;UBERON:0000153!7.44e-10!129;UBERON:0007811!7.44e-10!129;UBERON:0005743!1.43e-09!86;UBERON:0000924!1.72e-09!173;UBERON:0006601!1.72e-09!173;UBERON:0002619!2.30e-09!22;UBERON:0004121!3.02e-09!169;UBERON:0003056!5.64e-09!61;UBERON:0000064!6.00e-09!219;UBERON:0000033!9.25e-09!123;UBERON:0001950!9.63e-09!20;UBERON:0000956!1.70e-08!25;UBERON:0000203!1.70e-08!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.05e-10;32!UBERON:0001893;9.07e-10;34!UBERON:0002791;1.79e-09;32!UBERON:0002619;2.09e-09;22!UBERON:0003528;2.71e-09;34!UBERON:0002020;2.71e-09;34!UBERON:0001950;8.83e-09;20!UBERON:0002780;1.18e-08;41!UBERON:0001890;1.18e-08;41!UBERON:0000956;1.63e-08;25!UBERON:0000203;1.63e-08;25!UBERON:0000073;4.10e-08;53!UBERON:0002616;4.10e-08;53 | |ontology_enrichment_uberon_v019=UBERON:0001869;5.05e-10;32!UBERON:0001893;9.07e-10;34!UBERON:0002791;1.79e-09;32!UBERON:0002619;2.09e-09;22!UBERON:0003528;2.71e-09;34!UBERON:0002020;2.71e-09;34!UBERON:0001950;8.83e-09;20!UBERON:0002780;1.18e-08;41!UBERON:0001890;1.18e-08;41!UBERON:0000956;1.63e-08;25!UBERON:0000203;1.63e-08;25!UBERON:0000073;4.10e-08;53!UBERON:0002616;4.10e-08;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.83e-18,114;UBERON:0001049,1.56e-14,56;UBERON:0005068,1.56e-14,56;UBERON:0006241,1.56e-14,56;UBERON:0007135,1.56e-14,56;UBERON:0000073,2.64e-14,53;UBERON:0002616,2.64e-14,53;UBERON:0010371,3.51e-12,104;UBERON:0002780,1.12e-11,41;UBERON:0001890,1.12e-11,41;UBERON:0003080,1.12e-11,41;UBERON:0006240,1.12e-11,41;UBERON:0000955,2.34e-11,68;UBERON:0006238,2.34e-11,68;UBERON:0002346,4.64e-11,86;UBERON:0001893,5.28e-11,34;UBERON:0001869,5.90e-11,32;UBERON:0003075,6.87e-11,82;UBERON:0007284,6.87e-11,82;UBERON:0001016,7.16e-11,89;UBERON:0003528,1.45e-10,34;UBERON:0002020,1.45e-10,34;UBERON:0002791,2.65e-10,32;UBERON:0001017,4.55e-10,81;UBERON:0004121,6.20e-10,171;UBERON:0000924,6.20e-10,171;UBERON:0006601,6.20e-10,171;UBERON:0002619,2.18e-09,22;UBERON:0011216,5.05e-09,223;UBERON:0003056,7.22e-09,61;UBERON:0001950,9.18e-09,20;UBERON:0000956,1.63e-08,25;UBERON:0000203,1.63e-08,25 | |||
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| ||
|short_description=p1@BDH1 | |short_description=p1@BDH1 | ||
}} | }} |
Revision as of 22:58, 20 November 2012
Short description: | p1@BDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392379, ENST00000432819, ENST00000441275, ENST00000445160, ENST00000446746, ENST00000468710, ENST00000492681, NM_004051, NM_203314, uc003fxr.2, uc003fxs.2, uc003fxt.2_5end |
EntrezGene: | BDH1 |
HGNC: | 1027 |
UniProt: | Q02338C9JQ90E9PCG9C9JB83C9K0G7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.15e-09 | 53 |
common lymphoid progenitor | 6.15e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.35e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.83e-18 | 114 |
neural tube | 1.56e-14 | 56 |
neural rod | 1.56e-14 | 56 |
future spinal cord | 1.56e-14 | 56 |
neural keel | 1.56e-14 | 56 |
regional part of nervous system | 2.64e-14 | 53 |
regional part of brain | 2.64e-14 | 53 |
ecto-epithelium | 3.51e-12 | 104 |
regional part of forebrain | 1.12e-11 | 41 |
forebrain | 1.12e-11 | 41 |
anterior neural tube | 1.12e-11 | 41 |
future forebrain | 1.12e-11 | 41 |
brain | 2.34e-11 | 68 |
future brain | 2.34e-11 | 68 |
neurectoderm | 4.64e-11 | 86 |
telencephalon | 5.28e-11 | 34 |
cerebral hemisphere | 5.90e-11 | 32 |
neural plate | 6.87e-11 | 82 |
presumptive neural plate | 6.87e-11 | 82 |
nervous system | 7.16e-11 | 89 |
brain grey matter | 1.45e-10 | 34 |
gray matter | 1.45e-10 | 34 |
regional part of telencephalon | 2.65e-10 | 32 |
central nervous system | 4.55e-10 | 81 |
ectoderm-derived structure | 6.20e-10 | 171 |
ectoderm | 6.20e-10 | 171 |
presumptive ectoderm | 6.20e-10 | 171 |
regional part of cerebral cortex | 2.18e-09 | 22 |
organ system subdivision | 5.05e-09 | 223 |
pre-chordal neural plate | 7.22e-09 | 61 |
neocortex | 9.18e-09 | 20 |
cerebral cortex | 1.63e-08 | 25 |
pallium | 1.63e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.27e-09 | 51 |
immune system cancer | 7.27e-09 | 51 |
leukemia | 1.26e-08 | 39 |
myeloid leukemia | 4.83e-07 | 31 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.