FFCP PHASE1:Hg19::chr18:56246139..56246181,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.20e-21!180;CL:0000057!1.30e-16!75;CL:0000048!1.52e-14!430;CL:0000144!3.25e-14!625;CL:0000723!1.74e-13!436;CL:0000034!9.81e-13!444;CL:0000548!1.56e-12!679;CL:0000004!1.56e-12!679;CL:0000255!1.56e-12!679;CL:0000012!4.60e-12!682;CL:0000219!5.11e-12!390;CL:0002371!6.25e-11!591;CL:0000134!6.56e-11!358;CL:0002320!1.20e-10!365;CL:0002620!1.88e-09!23;CL:0002057!1.62e-08!42;CL:0000860!3.08e-07!45 | |ontology_enrichment_celltype=CL:0000055!6.20e-21!180;CL:0000057!1.30e-16!75;CL:0000048!1.52e-14!430;CL:0000144!3.25e-14!625;CL:0000723!1.74e-13!436;CL:0000034!9.81e-13!444;CL:0000548!1.56e-12!679;CL:0000004!1.56e-12!679;CL:0000255!1.56e-12!679;CL:0000012!4.60e-12!682;CL:0000219!5.11e-12!390;CL:0002371!6.25e-11!591;CL:0000134!6.56e-11!358;CL:0002320!1.20e-10!365;CL:0002620!1.88e-09!23;CL:0002057!1.62e-08!42;CL:0000860!3.08e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.67e-12;33!CL:0002057;3.67e-12;33!CL:0002620;5.16e-09;23!CL:0000473;1.27e-07;39!CL:0000234;1.27e-07;39 | |ontology_enrichment_celltype_v019=CL:0000860;3.67e-12;33!CL:0002057;3.67e-12;33!CL:0002620;5.16e-09;23!CL:0000473;1.27e-07;39!CL:0000234;1.27e-07;39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.01e-16,427;CL:0000057,3.28e-16,76;CL:0000723,5.82e-16,433;CL:0000034,5.49e-15,441;CL:0000219,2.61e-14,386;CL:0000134,2.96e-14,354;CL:0002320,2.28e-13,361;CL:0000860,5.77e-12,42;CL:0002057,5.77e-12,42;CL:0000473,1.73e-09,48;CL:0000234,1.73e-09,48;CL:0002620,4.28e-09,23;CL:0002194,6.97e-07,59;CL:0000576,6.97e-07,59;CL:0000040,6.97e-07,59;CL:0000559,6.97e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.42e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.42e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;9.09e-07;5!DOID:450;9.09e-07;5!DOID:66;9.09e-07;5!DOID:423;9.09e-07;5!DOID:0080000;9.09e-07;5!DOID:11722;9.09e-07;5 | |ontology_enrichment_disease_v019=DOID:17;9.09e-07;5!DOID:450;9.09e-07;5!DOID:66;9.09e-07;5!DOID:423;9.09e-07;5!DOID:0080000;9.09e-07;5!DOID:11722;9.09e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,8.59e-07,5;DOID:450,8.59e-07,5;DOID:66,8.59e-07,5;DOID:423,8.59e-07,5;DOID:0080000,8.59e-07,5;DOID:11722,8.59e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.37e-11!375 | |ontology_enrichment_uberon=UBERON:0002384!1.37e-11!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;3.27e-07;6!UBERON:0002358;3.27e-07;6!UBERON:0003684;3.27e-07;6!UBERON:0001178;3.27e-07;6!UBERON:0004457;4.23e-07;9!UBERON:0000042;4.23e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0003688;3.27e-07;6!UBERON:0002358;3.27e-07;6!UBERON:0003684;3.27e-07;6!UBERON:0001178;3.27e-07;6!UBERON:0004457;4.23e-07;9!UBERON:0000042;4.23e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.03e-13,371;UBERON:0003688,3.58e-07,6;UBERON:0002358,3.58e-07,6;UBERON:0003684,3.58e-07,6;UBERON:0001178,3.58e-07,6 | |||
|phase1_expression=5.26867299884614,2.78330681058278,8.88012745804618,1.0007329835313,1.78784437770915,1.74467704820074,0,0,0,0,0,0.655324116390517,0,0.247532705920093,0,1.34465029290355,0.602694528023977,0.730310090387373,0,0.246242116153576,0.204000691244253,1.25381888591235,4.57977579409691,2.73748850145768,4.2684497462233,0.534893840235659,0.246301768349837,0.550975469195755,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,2.21598163412751,2.4065333696417,3.68918480216948,0,0,0,0,0,0,0.697287110717054,5.34518254428373,4.33588919253145,2.58923153089935,3.84241059793651,4.02019790810595,4.82643953031266,7.10033151942209,8.12558919566051,0.564727018627814,4.09359225086769,4.94391665779186,17.4467818651414,40.1161283845117,23.0161365287655,0,0.398927315243264,0,10.7377418292576,22.1280237629545,13.7020894779026,1.7587406567972,2.08593167368081,2.17188844705117,2.42159801053347,20.9918252512912,9.49387162322653,0,0.425208599930087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60305222636709,1.44575660953827,4.51204119572301,2.89693037921647,0,2.43317435151318,0.283604451492204,0.665188192387692,0.351339142772504,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,3.41902381494365,44.2246663916151,6.59724227722272,1.06400514659507,8.41016400213461,0,2.22000793575444,0.311211035399766,0.538842688278752,0,0.302714855289863,1.15235184896,1.64025002283658,0.312160076830321,0,0.298897361103602,1.996386476944,0.485618833104395,0.280901613404497,0.408308342509787,0.368502951935304,1.75653827998801,4.75201142912821,4.20353779773547,0,0,0.336672227908132,0.125118519871964,0.554128230968366,3.5118209670467,7.66219489497549,1.65261864797256,0.113432183160021,8.9694817844431,8.32873816392413,10.172731255659,3.90118424909723,3.50378599410692,10.5632621418708,5.3973888336161,7.59493495085698,3.89748020644795,8.33031455005578,9.94138905336833,0.323292113637624,9.9402685904652,3.42557133973977,2.03472710772585,0,0.272746120590835,0,0.121973706129595,0,0,0.414644220061482,0,0,7.8224766164908,1.92972281457866,0,0.464367928031979,1.44375896333917,0.236613600079688,0.337169380156203,0,0.441175890929576,0.217879444092406,0.71181185733329,0,0.588664395376038,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.34779121492523,1.76113041353732,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0.839910640994298,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.8800594298514,4.78305348303778,0,0,1.06375246633948,1.04007436911366,0,0,0,4.86125178437702,0,0,0.325736184293735,3.909311436168,0.791951872933429,7.23454504943007,3.48613383440118,5.49851451501314,0,0,0,5.27174682081482,4.59447743336456,0,0.434343920002738,0.410952645100767,1.79060963239896,1.12085143993527,0,0,0,0.508189248444927,0,2.31986643833309,0.335032530668698,1.91381625495949,0,0,0,0.613457458595699,0,0,6.23912584592421,9.27830741745241,3.6271555457805,1.99140405487612,0.601892199455438,0,1.03473071292505,1.99267679560631,1.10621501125022,4.51794795234031,0.195801157462741,0,0,0.215714200818617,0.106727557803444,0,0,1.20956117331872,10.4205279283886,28.5439270315796,3.92924132206303,14.0953064181271,9.72243773226737,7.39928037260594,0,1.23367755042124,2.48586415438378,0.657017248110473,0,0.697262270759755,0,0,0,7.34812468253483,4.55227920016793,4.45823010862042,0.451199612907412,0,0,0,0.527758144464379,0,0,0.863663664408557,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,12.8547143875328,2.03008508413456,0,0,0,2.14840489736547,0.145016693914229,0.511359764496605,3.47224939022276,0,0,0,0,1.85938219718914,16.0554296883626,3.485186350803,0,0,0.869932992075073,0.9266210955196,0.858749320451947,1.48863347743867,3.79655309662471,4.19386426632415,0,1.71175595213568,1.27281299170375,0,2.51821440616641,1.37268514868027,0.353437207037059,0.404364963146632,0,0,0,0,0,2.8664981395677,6.92886616573193,0,0,0,0.438450885253763,0,0,1.21746226177622,0.30982349809975,0,0.430234056612155,2.25972794330179,0,0.709522128141196,1.68886108238131,1.31717957183961,0,1.74967360122491,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.13654458722565,0.23874448473769,0,0,0,0,0,0,0,0,0.828851746593443,0,0.920418142519393,0.123084805461069,9.02014804219242,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2571249341328,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,3.87402989879804,0.23056390438806,0.179515288819544,0.325942115766024,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.68798451622422,0,0,0,0,0,0,3.85477467284809,3.08909847366257,2.40170483862547,0.067401132980677,0,0,0.182454789215666,0,0,0,0,0,0.189559738885464,2.40517471063188,0,0,0,0,0,0.284609546029793,0.970722711091971,0,0,0,0,0,0,0,0,0,0,0,1.09633539717401,0,0,0,1.04206466326994,0.213452994739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| ||
|short_description=p2@ALPK2 | |short_description=p2@ALPK2 | ||
}} | }} |
Revision as of 22:32, 20 November 2012
Short description: | p2@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ALPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_AY044450_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.01e-16 | 427 |
fibroblast | 3.28e-16 | 76 |
somatic stem cell | 5.82e-16 | 433 |
stem cell | 5.49e-15 | 441 |
motile cell | 2.61e-14 | 386 |
mesenchymal cell | 2.96e-14 | 354 |
connective tissue cell | 2.28e-13 | 361 |
classical monocyte | 5.77e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.77e-12 | 42 |
defensive cell | 1.73e-09 | 48 |
phagocyte | 1.73e-09 | 48 |
skin fibroblast | 4.28e-09 | 23 |
monopoietic cell | 6.97e-07 | 59 |
monocyte | 6.97e-07 | 59 |
monoblast | 6.97e-07 | 59 |
promonocyte | 6.97e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.03e-13 | 371 |
omentum | 3.58e-07 | 6 |
peritoneum | 3.58e-07 | 6 |
abdominal cavity | 3.58e-07 | 6 |
visceral peritoneum | 3.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.59e-07 | 5 |
myotonic disease | 8.59e-07 | 5 |
muscle tissue disease | 8.59e-07 | 5 |
myopathy | 8.59e-07 | 5 |
muscular disease | 8.59e-07 | 5 |
myotonic dystrophy | 8.59e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.