FFCP PHASE1:Hg19::chr17:48266255..48266282,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.03e-35!180;CL:0000057!6.95e-29!75;CL:0000048!2.83e-16!430;CL:0000723!9.51e-16!436;CL:0000034!5.90e-15!444;CL:0002371!1.06e-12!591;CL:0002620!3.16e-11!23;CL:0002320!5.25e-11!365;CL:0000144!7.05e-11!625;CL:0000183!1.17e-10!59;CL:0000680!1.34e-10!57;CL:0000056!1.34e-10!57;CL:0000355!1.34e-10!57;CL:0002334!1.58e-10!12;CL:0000187!9.87e-10!54;CL:0000134!4.89e-09!358;CL:0000219!5.69e-08!390;CL:0002570!8.03e-08!8;CL:0000393!9.39e-08!60;CL:0000211!9.39e-08!60;CL:0000499!3.25e-07!27 | |ontology_enrichment_celltype=CL:0000055!7.03e-35!180;CL:0000057!6.95e-29!75;CL:0000048!2.83e-16!430;CL:0000723!9.51e-16!436;CL:0000034!5.90e-15!444;CL:0002371!1.06e-12!591;CL:0002620!3.16e-11!23;CL:0002320!5.25e-11!365;CL:0000144!7.05e-11!625;CL:0000183!1.17e-10!59;CL:0000680!1.34e-10!57;CL:0000056!1.34e-10!57;CL:0000355!1.34e-10!57;CL:0002334!1.58e-10!12;CL:0000187!9.87e-10!54;CL:0000134!4.89e-09!358;CL:0000219!5.69e-08!390;CL:0002570!8.03e-08!8;CL:0000393!9.39e-08!60;CL:0000211!9.39e-08!60;CL:0000499!3.25e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002334;3.05e-12;12!CL:0002570;9.51e-12;8!CL:0000499;1.02e-09;28!CL:0000134;6.28e-09;55!CL:0000057;2.38e-08;73!CL:0000048;3.97e-08;58!CL:0002320;5.41e-08;188!CL:0002569;1.90e-07;6!CL:0000327;2.23e-07;15!CL:0000723;4.58e-07;61!CL:0000135;7.16e-07;3!CL:0000388;7.16e-07;3 | |ontology_enrichment_celltype_v019=CL:0002334;3.05e-12;12!CL:0002570;9.51e-12;8!CL:0000499;1.02e-09;28!CL:0000134;6.28e-09;55!CL:0000057;2.38e-08;73!CL:0000048;3.97e-08;58!CL:0002320;5.41e-08;188!CL:0002569;1.90e-07;6!CL:0000327;2.23e-07;15!CL:0000723;4.58e-07;61!CL:0000135;7.16e-07;3!CL:0000388;7.16e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.14e-23,76;CL:0002320,4.52e-13,361;CL:0000048,8.66e-13,427;CL:0002334,2.67e-12,12;CL:0000723,2.92e-12,433;CL:0000134,4.69e-12,354;CL:0002570,6.92e-12,8;CL:0000034,1.39e-11,441;CL:0000219,4.04e-10,386;CL:0000499,1.54e-09,28;CL:0002569,2.40e-07,6;CL:0000327,3.19e-07,15;CL:0000135,7.37e-07,3;CL:0000388,7.37e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!6.85e-07!14 | |ontology_enrichment_disease=DOID:2394!6.85e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.65e-13!83;UBERON:0002329!3.65e-13!83;UBERON:0003077!3.65e-13!83;UBERON:0003059!3.65e-13!83;UBERON:0007282!3.65e-13!83;UBERON:0009618!3.65e-13!83;UBERON:0007285!3.65e-13!83;UBERON:0004290!1.14e-11!70;UBERON:0002384!1.95e-11!375;UBERON:0001013!2.13e-11!14;UBERON:0001134!8.16e-11!61;UBERON:0002036!8.16e-11!61;UBERON:0003082!8.16e-11!61;UBERON:0002385!4.27e-10!63;UBERON:0001015!4.27e-10!63;UBERON:0000383!4.27e-10!63;UBERON:0000486!1.21e-09!82;UBERON:0002199!4.32e-09!45;UBERON:0002416!4.32e-09!45;UBERON:0005256!6.05e-08!143;UBERON:0003102!3.01e-07!95 | |ontology_enrichment_uberon=UBERON:0000914!3.65e-13!83;UBERON:0002329!3.65e-13!83;UBERON:0003077!3.65e-13!83;UBERON:0003059!3.65e-13!83;UBERON:0007282!3.65e-13!83;UBERON:0009618!3.65e-13!83;UBERON:0007285!3.65e-13!83;UBERON:0004290!1.14e-11!70;UBERON:0002384!1.95e-11!375;UBERON:0001013!2.13e-11!14;UBERON:0001134!8.16e-11!61;UBERON:0002036!8.16e-11!61;UBERON:0003082!8.16e-11!61;UBERON:0002385!4.27e-10!63;UBERON:0001015!4.27e-10!63;UBERON:0000383!4.27e-10!63;UBERON:0000486!1.21e-09!82;UBERON:0002199!4.32e-09!45;UBERON:0002416!4.32e-09!45;UBERON:0005256!6.05e-08!143;UBERON:0003102!3.01e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.55e-12;14!UBERON:0003104;6.02e-09;7!UBERON:0009142;6.02e-09;7!UBERON:0004457;8.16e-09;9!UBERON:0000042;8.16e-09;9!UBERON:0002384;9.22e-09;198!UBERON:0003422;1.90e-07;6!UBERON:0003688;3.81e-07;6!UBERON:0002358;3.81e-07;6!UBERON:0003684;3.81e-07;6!UBERON:0001178;3.81e-07;6!UBERON:0007846;7.16e-07;3!UBERON:0000043;7.16e-07;3!UBERON:0007845;7.16e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001013;4.55e-12;14!UBERON:0003104;6.02e-09;7!UBERON:0009142;6.02e-09;7!UBERON:0004457;8.16e-09;9!UBERON:0000042;8.16e-09;9!UBERON:0002384;9.22e-09;198!UBERON:0003422;1.90e-07;6!UBERON:0003688;3.81e-07;6!UBERON:0002358;3.81e-07;6!UBERON:0003684;3.81e-07;6!UBERON:0001178;3.81e-07;6!UBERON:0007846;7.16e-07;3!UBERON:0000043;7.16e-07;3!UBERON:0007845;7.16e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.95e-14,371;UBERON:0001013,2.96e-12,14;UBERON:0003422,2.40e-07,6;UBERON:0003688,3.54e-07,6;UBERON:0002358,3.54e-07,6;UBERON:0003684,3.54e-07,6;UBERON:0001178,3.54e-07,6;UBERON:0007846,7.37e-07,3;UBERON:0000043,7.37e-07,3;UBERON:0007845,7.37e-07,3 | |||
|phase1_expression=0.908391896352783,2.14100523890983,1.55049844505568,6.00439790118782,3.12872766099101,3.48935409640147,7.59899634504932,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.74259811776028,0.662794751455832,0,0,0,0.487932798790507,0.738726348460727,1.83600622119828,2.19418305034661,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.91793842765295,2.1686349143074,1.00267582127178,3.0417768981773,0,2.43317435151318,0.189069634328136,0.443458794925128,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4364109856017,1.39293562831038,1.05927344650575,7.17091551872034,1.06400514659507,3.36406560085384,1.06748995729705,4.9333509683432,0.311211035399766,0.808264032418128,0.326923806226917,0.908144565869588,1.72852777344,0.70296429550139,0.312160076830321,0,0.896692083310806,0.23486899728753,0.161872944368132,0.140450806702248,0,0.245668634623536,0.103325781175765,1.18800285728205,6.42894016124248,0,2.87447256726495,0.168336113954066,0,0,0,2.14541457059314,2.10333282469236,1.58805056424029,1.79389635688862,2.77624605464138,0.423863802319124,5.10154863343484,0.824420233907511,4.63752972082133,0.930584281657949,3.71307930930786,1.36411807225678,4.54380793639406,0.460249493211497,0.646584227275248,4.26011511019937,0.403008392910561,1.3564847384839,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0.464367928031979,2.16563844500876,0,0.168584690078102,0,0,0,0,0,0,0,0,0,2.057870056657,5.88034845542168,0,0,0,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0.51336800074665,1.29271715757778,7.15312891703765,1.690605505112,1.86156681609409,0,0.257207374262142,0,0.266422179016099,2.85955987316295,8.13932408087165,0.823240336780769,2.60588947434988,3.55391948742546,3.16780749173372,0,0,0.199945982364114,0,0,0,4.0736225433569,10.3375742250703,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,1.00034104211935,0.542530047399471,8.11086359970148,7.31558854068363,8.83133524190034,1.28855556491985,0,0,2.0694614258501,3.98535359121262,0.368738337083406,0.0868836144680828,2.15381273209015,2.74514739048685,0,0,0,0.606255142892519,1.66435439510497,4.5358543999452,1.24053903909388,2.455391572609,7.01650236082684,2.30650468660262,0.511707249066704,7.23842645146234,2.96836132889982,1.54209693802656,3.9063579568888,0.492762936082855,2.07701771673448,4.18357362455853,0,0,0,1.14814448164607,1.45672934405374,1.44236856455367,0,0,0,0,0,0,0,0,0,0,2.00675909541941,0,0,0,0,0,0,0,0,0.103041011647722,0.640986253728404,0.165018999841176,0,0,3.21367859688319,0.290012154876366,0.770243085573222,0.460511024178389,0.689182862422653,0.751941714077915,0.435050081742686,0.426133137080504,3.73934549716297,0,0,0,0,0.464845549297286,6.61105928344344,0,0.616067160352178,0,0,0.55597265731176,0,0.372158369359667,0,3.24071329670502,0.767693373934002,0,0.636406495851874,0,1.07923474549989,2.19629623788844,0.117812402345686,0,0,0,1.46290121726877,1.46228093778771,0,1.63799893689583,3.67654123079653,2.26016233240486,0,0.66343897524122,0.438450885253763,1.15755106853338,0.655894752046633,0,0.6196469961995,0,0.860468113224309,3.242218353433,0.35667105148125,0.354761064070598,3.37772216476263,5.92730807327823,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,1.58186518546373,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,1.19730191562487,0,1.02232813071253,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88062487505873,6.31025936587506,1.66441758450784,0.568209015825267,1.76097531226803,0,0.686520205190771,1.66354016139563,1.70980920641059,0.443565449968902,1.27437413730962,0.449803112163605,1.39736661188633,0.414706207840855,2.12673371646396,2.08698024724694,6.31081957788317,1.52322084867518,0,0.545545977607678,1.39633724155235,0.464033759878494,1.59238355479446,0.400027764663154,1.37358282073117,1.01024846629776,0,0,0.214441591374926,0,0,0.231522474323834,0,0.537266523244462,0,0,0,0,0,0,0,0,0,0,0,0,0.9828295465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| ||
|short_description=p@chr17:48266255..48266282,+ | |short_description=p@chr17:48266255..48266282,+ | ||
}} | }} |
Revision as of 20:08, 20 November 2012
Short description: | p@chr17:48266255..48266282, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:48266255..48266282, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.14e-23 | 76 |
connective tissue cell | 4.52e-13 | 361 |
multi fate stem cell | 8.66e-13 | 427 |
preadipocyte | 2.67e-12 | 12 |
somatic stem cell | 2.92e-12 | 433 |
mesenchymal cell | 4.69e-12 | 354 |
mesenchymal stem cell of adipose | 6.92e-12 | 8 |
stem cell | 1.39e-11 | 441 |
motile cell | 4.04e-10 | 386 |
stromal cell | 1.54e-09 | 28 |
mesenchymal stem cell of umbilical cord | 2.40e-07 | 6 |
extracellular matrix secreting cell | 3.19e-07 | 15 |
fibrocyte | 7.37e-07 | 3 |
tendon cell | 7.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.95e-14 | 371 |
adipose tissue | 2.96e-12 | 14 |
mesenchyme of umbilical cord | 2.40e-07 | 6 |
omentum | 3.54e-07 | 6 |
peritoneum | 3.54e-07 | 6 |
abdominal cavity | 3.54e-07 | 6 |
visceral peritoneum | 3.54e-07 | 6 |
dense regular connective tissue | 7.37e-07 | 3 |
tendon | 7.37e-07 | 3 |
regular connective tissue | 7.37e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.