FFCP PHASE1:Hg19::chr6:160114497..160114513,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!3.19e-18!42;CL:0000860!4.90e-17!45;CL:0002194!7.71e-13!63;CL:0000576!7.71e-13!63;CL:0000040!7.71e-13!63;CL:0000559!7.71e-13!63;CL:0000766!4.96e-12!76;CL:0002009!1.26e-11!65;CL:0000839!2.55e-10!70;CL:0000557!7.23e-09!71 | |ontology_enrichment_celltype=CL:0002057!3.19e-18!42;CL:0000860!4.90e-17!45;CL:0002194!7.71e-13!63;CL:0000576!7.71e-13!63;CL:0000040!7.71e-13!63;CL:0000559!7.71e-13!63;CL:0000766!4.96e-12!76;CL:0002009!1.26e-11!65;CL:0000839!2.55e-10!70;CL:0000557!7.23e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.14e-27;33!CL:0002057;5.14e-27;33!CL:0000473;2.45e-23;39!CL:0000234;2.45e-23;39!CL:0000576;2.89e-14;48!CL:0000766;1.08e-10;69 | |ontology_enrichment_celltype_v019=CL:0000860;5.14e-27;33!CL:0002057;5.14e-27;33!CL:0000473;2.45e-23;39!CL:0000234;2.45e-23;39!CL:0000576;2.89e-14;48!CL:0000766;1.08e-10;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.82e-27,48;CL:0000234,2.82e-27,48;CL:0000860,2.67e-26,42;CL:0002057,2.67e-26,42;CL:0000766,1.12e-21,72;CL:0002194,3.37e-20,59;CL:0000576,3.37e-20,59;CL:0000040,3.37e-20,59;CL:0000559,3.37e-20,59;CL:0002009,4.25e-19,61;CL:0000839,1.17e-16,66;CL:0000557,3.24e-16,67;CL:0000048,9.30e-12,427;CL:0000723,4.05e-11,433;CL:0000034,1.20e-10,441;CL:0000763,1.12e-09,108;CL:0000049,1.12e-09,108;CL:0002320,2.52e-07,361;CL:0000134,2.58e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.91e-20;42 | |ontology_enrichment_development_v019=CL:0002057;9.91e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.53e-13!167;UBERON:0000926!2.25e-13!448;UBERON:0004120!2.25e-13!448;UBERON:0006603!2.25e-13!448;UBERON:0002193!1.87e-12!112;UBERON:0000468!5.04e-11!659;UBERON:0000467!3.65e-10!625;UBERON:0000480!3.92e-10!626;UBERON:0002390!7.47e-10!102;UBERON:0003061!7.47e-10!102;UBERON:0002405!1.80e-09!115;UBERON:0003081!2.01e-09!216;UBERON:0000922!3.17e-08!612;UBERON:0002050!4.68e-08!605;UBERON:0005423!4.68e-08!605;UBERON:0002371!4.70e-08!80;UBERON:0000923!6.69e-08!604;UBERON:0005291!6.69e-08!604;UBERON:0006598!6.69e-08!604;UBERON:0002532!6.69e-08!604;UBERON:0007023!1.77e-07!115;UBERON:0001474!3.49e-07!86;UBERON:0002385!3.63e-07!63;UBERON:0001015!3.63e-07!63;UBERON:0000383!3.63e-07!63;UBERON:0001134!7.60e-07!61;UBERON:0002036!7.60e-07!61;UBERON:0003082!7.60e-07!61 | |ontology_enrichment_uberon=UBERON:0002204!1.53e-13!167;UBERON:0000926!2.25e-13!448;UBERON:0004120!2.25e-13!448;UBERON:0006603!2.25e-13!448;UBERON:0002193!1.87e-12!112;UBERON:0000468!5.04e-11!659;UBERON:0000467!3.65e-10!625;UBERON:0000480!3.92e-10!626;UBERON:0002390!7.47e-10!102;UBERON:0003061!7.47e-10!102;UBERON:0002405!1.80e-09!115;UBERON:0003081!2.01e-09!216;UBERON:0000922!3.17e-08!612;UBERON:0002050!4.68e-08!605;UBERON:0005423!4.68e-08!605;UBERON:0002371!4.70e-08!80;UBERON:0000923!6.69e-08!604;UBERON:0005291!6.69e-08!604;UBERON:0006598!6.69e-08!604;UBERON:0002532!6.69e-08!604;UBERON:0007023!1.77e-07!115;UBERON:0001474!3.49e-07!86;UBERON:0002385!3.63e-07!63;UBERON:0001015!3.63e-07!63;UBERON:0000383!3.63e-07!63;UBERON:0001134!7.60e-07!61;UBERON:0002036!7.60e-07!61;UBERON:0003082!7.60e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.43e-08;15!UBERON:0000179;8.43e-08;15!UBERON:0000463;8.43e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.43e-08;15!UBERON:0000179;8.43e-08;15!UBERON:0000463;8.43e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.14e-22,108;UBERON:0002390,1.66e-19,98;UBERON:0003061,1.66e-19,98;UBERON:0000926,2.46e-18,315;UBERON:0004120,2.46e-18,315;UBERON:0006603,2.46e-18,315;UBERON:0002204,2.99e-17,167;UBERON:0002371,3.51e-16,76;UBERON:0002405,4.27e-16,93;UBERON:0001474,5.33e-14,82;UBERON:0003081,8.13e-14,203;UBERON:0004765,5.87e-13,90;UBERON:0001434,7.84e-13,100;UBERON:0000178,8.59e-08,15;UBERON:0000179,8.59e-08,15;UBERON:0000463,8.59e-08,15;UBERON:0002384,7.31e-07,371 | |||
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| ||
|short_description=p9@SOD2 | |short_description=p9@SOD2 | ||
}} | }} |
Revision as of 18:08, 20 November 2012
Short description: | p9@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SOD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -137bp_to_ENST00000538183_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.82e-27 | 48 |
phagocyte | 2.82e-27 | 48 |
classical monocyte | 2.67e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.67e-26 | 42 |
myeloid leukocyte | 1.12e-21 | 72 |
monopoietic cell | 3.37e-20 | 59 |
monocyte | 3.37e-20 | 59 |
monoblast | 3.37e-20 | 59 |
promonocyte | 3.37e-20 | 59 |
macrophage dendritic cell progenitor | 4.25e-19 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-16 | 66 |
granulocyte monocyte progenitor cell | 3.24e-16 | 67 |
multi fate stem cell | 9.30e-12 | 427 |
somatic stem cell | 4.05e-11 | 433 |
stem cell | 1.20e-10 | 441 |
myeloid cell | 1.12e-09 | 108 |
common myeloid progenitor | 1.12e-09 | 108 |
connective tissue cell | 2.52e-07 | 361 |
mesenchymal cell | 2.58e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.14e-22 | 108 |
hematopoietic system | 1.66e-19 | 98 |
blood island | 1.66e-19 | 98 |
mesoderm | 2.46e-18 | 315 |
mesoderm-derived structure | 2.46e-18 | 315 |
presumptive mesoderm | 2.46e-18 | 315 |
musculoskeletal system | 2.99e-17 | 167 |
bone marrow | 3.51e-16 | 76 |
immune system | 4.27e-16 | 93 |
bone element | 5.33e-14 | 82 |
lateral plate mesoderm | 8.13e-14 | 203 |
skeletal element | 5.87e-13 | 90 |
skeletal system | 7.84e-13 | 100 |
blood | 8.59e-08 | 15 |
haemolymphatic fluid | 8.59e-08 | 15 |
organism substance | 8.59e-08 | 15 |
connective tissue | 7.31e-07 | 371 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.